AC092070.3 (novel transcript, antisense to ZNF677) - Rat Genome Database

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Gene: AC092070.3 (novel transcript, antisense to ZNF677) Homo sapiens
Analyze
Symbol: AC092070.3
Name: novel transcript, antisense to ZNF677
RGD ID: 16565148
Description:
Type: lncrna
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl1953,240,675 - 53,241,913 (+)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:202
Count of miRNA genes:199
Interacting mature miRNAs:200
Transcripts:ENST00000596041
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 1
Low 2032 2077 1196 173 471 15 3660 1492 3010 158 1206 1294 158 1196 2268
Below cutoff 202 398 190 137 351 135 497 569 563 93 51 80 4 6 443 1

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000596041
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1953,240,675 - 53,241,913 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AC092070.3 COSMIC
Ensembl Genes ENSG00000269288 Ensembl
GTEx ENSG00000269288 GTEx
Human Proteome Map AC092070.3 Human Proteome Map