AC011479.1 (novel protein) - Rat Genome Database

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Gene: AC011479.1 (novel protein) Homo sapiens
Analyze
Symbol: AC011479.1
Name: novel protein
RGD ID: 16564822
Description: ENCODES a protein that exhibits serine-type endopeptidase inhibitor activity (inferred); FOUND IN nucleus (inferred)
Type: protein-coding
Previously known as: AC011479.2
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl1938,289,151 - 38,304,910 (+)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
nucleus  (IEA)

Molecular Function

References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:664
Count of miRNA genes:513
Interacting mature miRNAs:572
Transcripts:ENST00000587519, ENST00000591889
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system entire extraembryonic component
High
Medium 11 1 2 1 1 4 65 21
Low 115 1 73 31 68 33 30 1 163 148 182 4 3
Below cutoff 60 5 71 63 148 65 94 7 22 89 47 65 3 1

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000587519   ⟹   ENSP00000465845
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1938,289,151 - 38,304,910 (+)Ensembl
RefSeq Acc Id: ENST00000591889   ⟹   ENSP00000468040
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1938,289,168 - 38,304,909 (+)Ensembl
Protein Sequences
Ensembl Protein ENSP00000465845.3
  ENSP00000468040.1
Reference Protein Sequences
RefSeq Acc Id: ENSP00000465845   ⟸   ENST00000587519
RefSeq Acc Id: ENSP00000468040   ⟸   ENST00000591889
Protein Domains
BPTI/Kunitz inhibitor


Additional Information

Database Acc Id Source(s)
COSMIC AC011479.1 COSMIC
Ensembl Genes ENSG00000267748 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENST00000587519.4 UniProtKB/TrEMBL
  ENST00000591889.2 UniProtKB/TrEMBL
Gene3D-CATH 4.10.410.10 UniProtKB/TrEMBL
GTEx ENSG00000267748 GTEx
Human Proteome Map AC011479.1 Human Proteome Map
InterPro IMUP UniProtKB/TrEMBL
  Kunitz_BPTI UniProtKB/TrEMBL
  Kunitz_BPTI_sf UniProtKB/TrEMBL
  Prtase_inh_Kunz-CS UniProtKB/TrEMBL
PANTHER KUNITZ-TYPE PROTEASE INHIBITOR 2 UniProtKB/TrEMBL
  KUNITZ-TYPE PROTEASE INHIBITOR 2 UniProtKB/TrEMBL
Pfam IMUP UniProtKB/TrEMBL
  Kunitz_BPTI UniProtKB/TrEMBL
PRINTS BASICPTASE UniProtKB/TrEMBL
PROSITE BPTI_KUNITZ_1 UniProtKB/TrEMBL
  BPTI_KUNITZ_2 UniProtKB/TrEMBL
SMART SM00131 UniProtKB/TrEMBL
Superfamily-SCOP SSF57362 UniProtKB/TrEMBL
UniProt K7EKZ2_HUMAN UniProtKB/TrEMBL
  K7EQZ3_HUMAN UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-08-20 AC011479.1  novel protein  AC011479.2  novel protein  Symbol and/or name change 19259462 PROVISIONAL
2020-02-07 AC011479.2  novel protein  AC011479.1  novel protein  Symbol and/or name change 19259462 PROVISIONAL