AC091551.1 (novel protein) - Rat Genome Database

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Gene: AC091551.1 (novel protein) Homo sapiens
Analyze
Symbol: AC091551.1
Name: novel protein
RGD ID: 16564794
Description:
Type: protein-coding
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl1850,968,019 - 51,058,144 (+)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:370
Count of miRNA genes:302
Interacting mature miRNAs:322
Transcripts:ENST00000588256, ENST00000590722
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system appendage entire extraembryonic component
High
Medium
Low 16 5 1 25 1 10 9 12 3 12 33
Below cutoff 89 6 36 21 190 25 149 42 67 53 97 154 6 1 1

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000588256
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1850,968,023 - 51,047,111 (+)Ensembl
RefSeq Acc Id: ENST00000590722   ⟹   ENSP00000465737
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1850,968,019 - 51,058,144 (+)Ensembl
Protein Sequences
Ensembl Protein ENSP00000465737.1
Reference Protein Sequences
RefSeq Acc Id: ENSP00000465737   ⟸   ENST00000590722


Additional Information

Database Acc Id Source(s)
COSMIC AC091551.1 COSMIC
Ensembl Genes ENSG00000267699 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENST00000590722.2 UniProtKB/TrEMBL
Gene3D-CATH 3.60.15.10 UniProtKB/TrEMBL
GTEx ENSG00000267699 GTEx
Human Proteome Map AC091551.1 Human Proteome Map
InterPro RibonucZ/Hydroxyglut_hydro UniProtKB/TrEMBL
PANTHER ZINC PHOSPHODIESTERASE ELAC PROTEIN 1 UniProtKB/TrEMBL
  ZINC PHOSPHODIESTERASE ELAC PROTEIN 1 UniProtKB/TrEMBL
Superfamily-SCOP SSF56281 UniProtKB/TrEMBL
UniProt E7EUB6_HUMAN UniProtKB/TrEMBL