AC008481.3 (novel protein) - Rat Genome Database

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Gene: AC008481.3 (novel protein) Homo sapiens
Analyze
Symbol: AC008481.3
Name: novel protein
RGD ID: 16564664
Description:
Type: protein-coding
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl1911,466,240 - 11,505,698 (-)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:204
Count of miRNA genes:187
Interacting mature miRNAs:195
Transcripts:ENST00000585656
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium
Low 1
Below cutoff 2 7 3 7 3 27 4 23 3 9 33

Sequence

Nucleotide Sequences

RefSeq Acc Id: ENST00000585656   ⟹   ENSP00000466387
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1911,466,240 - 11,505,698 (-)Ensembl
Protein Sequences
Ensembl Protein ENSP00000466387.1
RefSeq Acc Id: ENSP00000466387   ⟸   ENST00000585656


Additional Information

Database Acc Id Source(s)
COSMIC AC008481.3 COSMIC
Ensembl Genes ENSG00000267477 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENST00000585656.1 UniProtKB/TrEMBL
GTEx ENSG00000267477 GTEx
Human Proteome Map AC008481.3 Human Proteome Map
UniProt K7EM74_HUMAN UniProtKB/TrEMBL