DHX35-DT (DHX35 divergent transcript) - Rat Genome Database

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Gene: DHX35-DT (DHX35 divergent transcript) Homo sapiens
Analyze
Symbol: DHX35-DT (Ensembl: AL023803.1)
Name: DHX35 divergent transcript (Ensembl:novel transcript, antisense to DHX35)
RGD ID: 16563268
Description:
Type: lncrna
Previously known as: AL023803.1; novel transcript, antisense to DHX35
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl2038,961,925 - 38,962,111 (-)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:209
Count of miRNA genes:202
Interacting mature miRNAs:208
Transcripts:ENST00000570096
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 3 2 2 2 2 3 1 1 32
Low 790 176 879 283 531 265 569 467 1293 266 724 570 28 123 250 3
Below cutoff 758 701 475 178 277 122 1082 759 1389 92 242 385 58 327 731

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000570096
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2038,961,925 - 38,962,111 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC DHX35-DT COSMIC
Ensembl Genes ENSG00000261431 Ensembl
GTEx ENSG00000261431 GTEx
Human Proteome Map DHX35-DT Human Proteome Map


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-11-16 DHX35-DT  DHX35 divergent transcript  AL023803.1  novel transcript, antisense to DHX35  Symbol and/or name change 19259463 PROVISIONAL