AC091489.2 (geminin, DNA replication inhibitor (GMNN) pseudogene) - Rat Genome Database

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Gene: AC091489.2 (geminin, DNA replication inhibitor (GMNN) pseudogene) Homo sapiens
Analyze
Symbol: AC091489.2
Name: geminin, DNA replication inhibitor (GMNN) pseudogene
RGD ID: 16563007
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: geminin, DNA replication inhibitor pseudogene 2; LOC100133137
Related Functional Gene: GMNN  
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381618,170,368 - 18,170,982 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1618,170,356 - 18,170,959 (+)EnsemblGRCh38hg38GRCh38
GRCh371618,264,225 - 18,264,839 (+)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map16p12.3NCBI
CHM1_11618,351,669 - 18,352,283 (+)NCBICHM1_1
T2T-CHM13v2.01618,177,597 - 18,178,211 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:64
Count of miRNA genes:64
Interacting mature miRNAs:64
Transcripts:ENST00000566263
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium
Low 3 1 1 1 2 4
Below cutoff 44 30 22 7 42 4 67 30 40 10 52 28 3 13 44

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000566263
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1618,170,356 - 18,170,959 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AC091489.2 COSMIC
Ensembl Genes ENSG00000260933 Ensembl, ENTREZGENE
GTEx ENSG00000260933 GTEx
Human Proteome Map AC091489.2 Human Proteome Map
NCBI Gene LOC100133137 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-06-25 AC091489.2  geminin, DNA replication inhibitor (GMNN) pseudogene  LOC100133137  geminin, DNA replication inhibitor pseudogene 2  Symbol and/or name change 19259462 PROVISIONAL
2020-06-18 LOC100133137  geminin, DNA replication inhibitor pseudogene 2  AC091489.2  geminin, DNA replication inhibitor (GMNN) pseudogene  Symbol and/or name change 5135510 APPROVED