AC027373.1 (novel transcript, overlapping YWHAZ) - Rat Genome Database

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Gene: AC027373.1 (novel transcript, overlapping YWHAZ) Homo sapiens
Analyze
Symbol: AC027373.1
Name: novel transcript, overlapping YWHAZ
RGD ID: 16562707
Description:
Type: lncrna
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl8100,913,247 - 100,914,388 (-)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:49
Count of miRNA genes:47
Interacting mature miRNAs:48
Transcripts:ENST00000564694
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 1 1 13 3 2 18 1
Low 1751 1766 1179 277 1509 172 2399 1067 2390 207 1243 1376 118 830 1411 2
Below cutoff 664 1165 510 318 365 266 1891 1090 1293 194 175 217 52 366 1332 2

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000564694
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl8100,913,247 - 100,914,388 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AC027373.1 COSMIC
Ensembl Genes ENSG00000260368 Ensembl
GTEx ENSG00000260368 GTEx
Human Proteome Map AC027373.1 Human Proteome Map