AC011767.1 (Golgin subfamily A member 6 pseudogene) - Rat Genome Database

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Gene: AC011767.1 (Golgin subfamily A member 6 pseudogene) Homo sapiens
Analyze
Symbol: AC011767.1
Name: Golgin subfamily A member 6 pseudogene
RGD ID: 16562208
Description:
Type: transcribed_unprocessed_pseudogene
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl1522,770,523 - 22,776,199 (-)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:915
Count of miRNA genes:580
Interacting mature miRNAs:647
Transcripts:ENST00000558417, ENST00000559740, ENST00000559762, ENST00000560434
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 7 3 1 351 9
Low 1007 465 467 15 193 15 78 683 1640 72 361 205 1 11 26 1
Below cutoff 1138 1350 830 228 652 121 2538 1025 1829 237 487 1105 112 871 1558

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000559740
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1522,773,097 - 22,776,120 (-)Ensembl
RefSeq Acc Id: ENST00000559762
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1522,773,194 - 22,776,199 (-)Ensembl
RefSeq Acc Id: ENST00000560434
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1522,774,384 - 22,776,120 (-)Ensembl
RefSeq Acc Id: ENST00000617410
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1522,770,523 - 22,776,058 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AC011767.1 COSMIC
Ensembl Genes ENSG00000259425 Ensembl
GTEx ENSG00000259425 GTEx
Human Proteome Map AC011767.1 Human Proteome Map