AL161670.2 (eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa (EIF2S2) pseudogene) - Rat Genome Database

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Gene: AL161670.2 (eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa (EIF2S2) pseudogene) Homo sapiens
Analyze
Symbol: AL161670.2
Name: eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa (EIF2S2) pseudogene
RGD ID: 16561851
Description:
Type: processed_pseudogene
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl1463,734,697 - 63,735,923 (+)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:87
Count of miRNA genes:85
Interacting mature miRNAs:86
Transcripts:ENST00000557650
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium
Low 91 10 30 17 180 20 184 47 74 33 160 177 7 1 3
Below cutoff 436 476 390 108 247 79 997 432 929 113 501 421 31 287 621 1

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000557650
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1463,734,697 - 63,735,923 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AL161670.2 COSMIC
Ensembl Genes ENSG00000258778 Ensembl
GTEx ENSG00000258778 GTEx
Human Proteome Map AL161670.2 Human Proteome Map