AL162231.3 (novel protein (GALT-IL11RA readthrough)) - Rat Genome Database

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Gene: AL162231.3 (novel protein (GALT-IL11RA readthrough)) Homo sapiens
Analyze
Symbol: AL162231.3
Name: novel protein (GALT-IL11RA readthrough)
RGD ID: 16561820
Description: ENCODES a protein that exhibits nucleotidyltransferase activity (inferred); UDP-glucose:hexose-1-phosphate uridylyltransferase activity (inferred); zinc ion binding (inferred); INVOLVED IN carbohydrate metabolic process (inferred); galactose metabolic process (inferred)
Type: protein-coding
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl934,646,645 - 34,657,113 (+)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:241
Count of miRNA genes:221
Interacting mature miRNAs:240
Transcripts:ENST00000556278
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system entire extraembryonic component pharyngeal arch
High
Medium 1
Low 7 7 3 2 5 1 2 4 26 1 14 6 4 1 2 2
Below cutoff 12 2 43 27 63 27 22 7 19 31 29 51

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000556278   ⟹   ENSP00000451792
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl934,646,645 - 34,657,113 (+)Ensembl
RefSeq Acc Id: ENST00000691183   ⟹   ENSP00000509954
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl934,646,631 - 34,661,886 (+)Ensembl
Protein Sequences
Ensembl Protein ENSP00000451792.1
  ENSP00000509954.1
Reference Protein Sequences
RefSeq Acc Id: ENSP00000451792   ⟸   ENST00000556278
RefSeq Acc Id: ENSP00000509954   ⟸   ENST00000691183
Protein Domains
Galactose-1-phosphate uridyl transferase N-terminal   Ig-like


Additional Information

Database Acc Id Source(s)
COSMIC AL162231.3 COSMIC
Ensembl Genes ENSG00000258728 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENST00000556278.1 UniProtKB/TrEMBL
  ENST00000691183.1 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.10 UniProtKB/TrEMBL
  3.30.428.10 UniProtKB/TrEMBL
GTEx ENSG00000258728 GTEx
Human Proteome Map AL162231.3 Human Proteome Map
InterPro FN3_sf UniProtKB/TrEMBL
  GalP_UDPtransf1 UniProtKB/TrEMBL
  GalP_UDPtransf1_His-AS UniProtKB/TrEMBL
  GalP_Utransf_N UniProtKB/TrEMBL
  HIT-like_sf UniProtKB/TrEMBL
  Ig-like_dom UniProtKB/TrEMBL
  Ig-like_dom_sf UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/TrEMBL
  Ig_sub UniProtKB/TrEMBL
PANTHER GALACTOSE-1-PHOSPHATE URIDYLYLTRANSFERASE UniProtKB/TrEMBL
  PTHR11943 UniProtKB/TrEMBL
Pfam GalP_UDP_transf UniProtKB/TrEMBL
PROSITE GAL_P_UDP_TRANSF_I UniProtKB/TrEMBL
  IG_LIKE UniProtKB/TrEMBL
SMART SM00409 UniProtKB/TrEMBL
Superfamily-SCOP SSF48726 UniProtKB/TrEMBL
  SSF49265 UniProtKB/TrEMBL
  SSF54197 UniProtKB/TrEMBL
UniProt A0A8I5KVJ6_HUMAN UniProtKB/TrEMBL
  G3V4G9_HUMAN UniProtKB/TrEMBL