AC023157.1 (dpy-30 homolog (C. elegans) (DPY30) pseudogene) - Rat Genome Database

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Gene: AC023157.1 (dpy-30 homolog (C. elegans) (DPY30) pseudogene) Homo sapiens
Analyze
Symbol: AC023157.1
Name: dpy-30 homolog (C. elegans) (DPY30) pseudogene
RGD ID: 16561139
Description:
Type: processed_pseudogene
Previously known as: AC023157.2
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl1231,748,100 - 31,748,240 (-)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:127
Count of miRNA genes:125
Interacting mature miRNAs:127
Transcripts:ENST00000540596
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium 3
Low 290 59 47 21 220 19 84 16 34 22 87 70 5 12 56
Below cutoff 315 299 148 39 259 26 409 178 306 28 167 173 16 110 268

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000540596
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1231,748,100 - 31,748,240 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AC023157.1 COSMIC
Ensembl Genes ENSG00000256843 Ensembl
GTEx ENSG00000256843 GTEx
Human Proteome Map AC023157.1 Human Proteome Map


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-04-30 AC023157.1  dpy-30 homolog (C. elegans) (DPY30) pseudogene  AC023157.2  dpy-30 homolog (C. elegans) (DPY30) pseudogene  Symbol and/or name change 19259462 PROVISIONAL