AC026358.1 (novel transcript) - Rat Genome Database

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Gene: AC026358.1 (novel transcript) Homo sapiens
Analyze
Symbol: AC026358.1
Name: novel transcript
RGD ID: 16561080
Description:
Type: lncrna
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl12124,206,228 - 124,209,018 (+)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:125
Count of miRNA genes:119
Interacting mature miRNAs:124
Transcripts:ENST00000539391
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 77
Low 7 2 20 2 7 2 8 2 75 27 324 33 9 3
Below cutoff 1741 1462 1282 279 534 161 2909 1104 3462 280 799 1205 127 1037 1852 4

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000539391
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl12124,206,228 - 124,209,018 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AC026358.1 COSMIC
Ensembl Genes ENSG00000256596 Ensembl
GTEx ENSG00000256596 GTEx
Human Proteome Map AC026358.1 Human Proteome Map