AC087362.2 (novel transcript) - Rat Genome Database

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Gene: AC087362.2 (novel transcript) Homo sapiens
Analyze
Symbol: AC087362.2
Name: novel transcript
RGD ID: 16560784
Description:
Type: lncrna
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl838,275,888 - 38,276,680 (+)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:226
Count of miRNA genes:216
Interacting mature miRNAs:221
Transcripts:ENST00000529325
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 17 1
Low 1032 797 792 170 662 94 2033 592 1335 146 997 924 83 659 1265 4
Below cutoff 972 1199 581 238 459 171 1528 1071 1319 162 291 437 68 428 1030

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000529325
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl838,275,888 - 38,276,680 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AC087362.2 COSMIC
Ensembl Genes ENSG00000255487 Ensembl
GTEx ENSG00000255487 GTEx
Human Proteome Map AC087362.2 Human Proteome Map