AC135050.2 (novel protein, VKORC1 and PRSS53 readthrough) - Rat Genome Database

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Gene: AC135050.2 (novel protein, VKORC1 and PRSS53 readthrough) Homo sapiens
Analyze
Symbol: AC135050.2
Name: novel protein, VKORC1 and PRSS53 readthrough
RGD ID: 16560750
Description: ENCODES a protein that exhibits oxidoreductase activity (inferred); oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor (inferred); quinone binding (inferred); INVOLVED IN proteolysis (inferred); vitamin K metabolic process (inferred); FOUND IN endoplasmic reticulum
Type: protein-coding
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl1631,083,439 - 31,094,956 (-)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2078
Count of miRNA genes:861
Interacting mature miRNAs:1021
Transcripts:ENST00000529564, ENST00000532364, ENST00000533518
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system appendage entire extraembryonic component pharyngeal arch
High
Medium 1 1 1
Low 18 7 11 10 8 9 20 7 40 10 62 29 6 1 1 2 2
Below cutoff 160 5 214 154 336 154 156 35 88 225 219 305 6

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000529564   ⟹   ENSP00000431371
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1631,086,868 - 31,094,956 (-)Ensembl
RefSeq Acc Id: ENST00000532364   ⟹   ENSP00000460316
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1631,086,760 - 31,094,916 (-)Ensembl
RefSeq Acc Id: ENST00000533518   ⟹   ENSP00000433035
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1631,083,439 - 31,094,602 (-)Ensembl
Protein Sequences
Ensembl Protein ENSP00000431371.1
  ENSP00000433035.1
  ENSP00000460316.1
Reference Protein Sequences
RefSeq Acc Id: ENSP00000460316   ⟸   ENST00000532364
RefSeq Acc Id: ENSP00000433035   ⟸   ENST00000533518
RefSeq Acc Id: ENSP00000431371   ⟸   ENST00000529564
Protein Domains
Vitamin K epoxide reductase


Additional Information

Database Acc Id Source(s)
COSMIC AC135050.2 COSMIC
Ensembl Genes ENSG00000255439 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENST00000529564.1 UniProtKB/TrEMBL
  ENST00000532364.1 UniProtKB/TrEMBL
  ENST00000533518.5 UniProtKB/TrEMBL
Gene3D-CATH 1.20.1440.130 UniProtKB/TrEMBL
  2.40.10.10 UniProtKB/TrEMBL
GTEx ENSG00000255439 GTEx
Human Proteome Map AC135050.2 Human Proteome Map
InterPro Peptidase_S1_PA UniProtKB/TrEMBL
  Peptidase_S1_PA_chymotrypsin UniProtKB/TrEMBL
  Trypsin_dom UniProtKB/TrEMBL
  TRYPSIN_HIS UniProtKB/TrEMBL
  VKOR UniProtKB/TrEMBL
  VKOR_sf UniProtKB/TrEMBL
  VKORC1/VKORC1L1 UniProtKB/TrEMBL
PANTHER PTHR14519 UniProtKB/TrEMBL
  VITAMIN K EPOXIDE REDUCTASE COMPLEX SUBUNIT 1 UniProtKB/TrEMBL
Pfam Trypsin UniProtKB/TrEMBL
  VKOR UniProtKB/TrEMBL
PROSITE TRYPSIN_HIS UniProtKB/TrEMBL
SMART VKc UniProtKB/TrEMBL
Superfamily-SCOP SSF50494 UniProtKB/TrEMBL
UniProt E9PLN8_HUMAN UniProtKB/TrEMBL
  H0YD56_HUMAN UniProtKB/TrEMBL
  I3L3B4_HUMAN UniProtKB/TrEMBL