Z97989.1 (chromosome 6 open reading frame 3) - Rat Genome Database

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Gene: Z97989.1 (chromosome 6 open reading frame 3) Homo sapiens
Analyze
Symbol: Z97989.1
Name: chromosome 6 open reading frame 3
RGD ID: 16560726
Description:
Type: lncrna
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl6111,599,875 - 111,602,295 (+)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:102
Count of miRNA genes:84
Interacting mature miRNAs:85
Transcripts:ENST00000531702
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 109 79 64 1 49 1 123 40 599 21 266 103 17 116
Low 2213 2530 1464 430 1578 281 3933 1852 3101 341 1102 1406 156 1175 2423 3
Below cutoff 104 369 194 190 310 181 299 301 8 56 80 98 14 12 249 1

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000531702
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl6111,599,875 - 111,602,295 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC Z97989.1 COSMIC
Ensembl Genes ENSG00000255389 Ensembl
GTEx ENSG00000255389 GTEx
Human Proteome Map Z97989.1 Human Proteome Map