AC087441.3 (Acyl-CoA-binding domain-containing protein 7 (ACBD7) pseudogene) - Rat Genome Database

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Gene: AC087441.3 (Acyl-CoA-binding domain-containing protein 7 (ACBD7) pseudogene) Homo sapiens
Analyze
Symbol: AC087441.3
Name: Acyl-CoA-binding domain-containing protein 7 (ACBD7) pseudogene
RGD ID: 16560647
Description:
Type: processed_pseudogene
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl113,961,277 - 3,961,538 (+)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:305
Count of miRNA genes:289
Interacting mature miRNAs:302
Transcripts:ENST00000529141
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 1 3 5
Low 4 9 10 3 79 2 19 6 10 2 12 12 1 1 9
Below cutoff 114 102 97 46 177 30 280 100 152 20 127 110 19 49 149 3

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000529141
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl113,961,277 - 3,961,538 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AC087441.3 COSMIC
Ensembl Genes ENSG00000255232 Ensembl
GTEx ENSG00000255232 GTEx
Human Proteome Map AC087441.3 Human Proteome Map