AC100871.1 (neuropilin (NRP) and tolloid (TLL)-like 2 (NETO2) pseudogene) - Rat Genome Database

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Gene: AC100871.1 (neuropilin (NRP) and tolloid (TLL)-like 2 (NETO2) pseudogene) Homo sapiens
Analyze
Symbol: AC100871.1
Name: neuropilin (NRP) and tolloid (TLL)-like 2 (NETO2) pseudogene
RGD ID: 16558986
Description:
Type: processed_pseudogene
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl8124,141,888 - 124,143,512 (+)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:159
Count of miRNA genes:157
Interacting mature miRNAs:159
Transcripts:ENST00000507871
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium
Low 1 9 3
Below cutoff 129 134 244 16 72 12 223 129 281 23 332 224 4 42 170

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000507871
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl8124,141,888 - 124,143,512 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AC100871.1 COSMIC
Ensembl Genes ENSG00000250727 Ensembl
GTEx ENSG00000250727 GTEx
Human Proteome Map AC100871.1 Human Proteome Map