AC048346.1 (pseudogene similar to killer cell lectin-like receptor subfamily C, member 1 (KLRC1)) - Rat Genome Database

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Gene: AC048346.1 (pseudogene similar to killer cell lectin-like receptor subfamily C, member 1 (KLRC1)) Homo sapiens
Analyze
Symbol: AC048346.1
Name: pseudogene similar to killer cell lectin-like receptor subfamily C, member 1 (KLRC1)
RGD ID: 16558461
Description:
Type: processed_pseudogene
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl3140,619,694 - 140,619,837 (-)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:164
Count of miRNA genes:156
Interacting mature miRNAs:162
Transcripts:ENST00000401365, ENST00000510247
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system adipose tissue appendage
High
Medium
Low 3 3 4 2 1 6 2 3 1
Below cutoff 11 7 6 16 10 6 15 16 6 14 6

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000510247
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl3140,619,694 - 140,619,837 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AC048346.1 COSMIC
Ensembl Genes ENSG00000249305 Ensembl
GTEx ENSG00000249305 GTEx
Human Proteome Map AC048346.1 Human Proteome Map