AL139135.1 (coronin, actin binding protein, 1C (CORO1C) pseudogene) - Rat Genome Database

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Gene: AL139135.1 (coronin, actin binding protein, 1C (CORO1C) pseudogene) Homo sapiens
Analyze
Symbol: AL139135.1
Name: coronin, actin binding protein, 1C (CORO1C) pseudogene
RGD ID: 16556398
Description:
Type: processed_pseudogene
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl1190,781,787 - 190,781,995 (+)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:285
Count of miRNA genes:271
Interacting mature miRNAs:282
Transcripts:ENST00000412675
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system integumental system musculoskeletal system nervous system reproductive system respiratory system sensory system appendage
High
Medium
Low 1 1 1 2
Below cutoff 2 3 2 1 7 1 3 21 2 1 1

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000412675
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1190,781,787 - 190,781,995 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AL139135.1 COSMIC
Ensembl Genes ENSG00000236025 Ensembl
GTEx ENSG00000236025 GTEx
Human Proteome Map AL139135.1 Human Proteome Map