AC245884.2 (leukocyte immunoglobulin-like receptor, subfamily A pseudogene) - Rat Genome Database

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Gene: AC245884.2 (leukocyte immunoglobulin-like receptor, subfamily A pseudogene) Homo sapiens
Analyze
Symbol: AC245884.2
Name: leukocyte immunoglobulin-like receptor, subfamily A pseudogene
RGD ID: 16555922
Description:
Type: unprocessed_pseudogene
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl1954,301,758 - 54,306,026 (-)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:159
Count of miRNA genes:150
Interacting mature miRNAs:159
Transcripts:ENST00000426257
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium 69 70 1
Low 26 490 4 4 673 4 4 9 2 4 13 159 1 71 1
Below cutoff 367 479 233 108 327 90 368 248 235 54 223 357 18 299 201

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000426257
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1954,301,758 - 54,306,026 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AC245884.2 COSMIC
Ensembl Genes ENSG00000234436 Ensembl
GTEx ENSG00000234436 GTEx
Human Proteome Map AC245884.2 Human Proteome Map