AC138951.1 (POM121 membrane glycoprotein (POM121) pseudogene) - Rat Genome Database

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Gene: AC138951.1 (POM121 membrane glycoprotein (POM121) pseudogene) Homo sapiens
Analyze
Symbol: AC138951.1
Name: POM121 membrane glycoprotein (POM121) pseudogene
RGD ID: 16555790
Description:
Type: processed_pseudogene
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl521,481,327 - 21,484,011 (-)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:269
Count of miRNA genes:257
Interacting mature miRNAs:262
Transcripts:ENST00000366374, ENST00000502532
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 292
Low 124 172 122 25 154 15 603 60 287 15 236 152 11 79 376 1
Below cutoff 1800 2239 1195 370 1230 231 3153 1541 3014 221 736 1158 145 948 2042 1

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000502532
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl521,481,327 - 21,484,011 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AC138951.1 COSMIC
Ensembl Genes ENSG00000233974 Ensembl
GTEx ENSG00000233974 GTEx
Human Proteome Map AC138951.1 Human Proteome Map