AC018865.1 (pseudogene similar to part of nucleolar protein 5 Nol5) - Rat Genome Database

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Gene: AC018865.1 (pseudogene similar to part of nucleolar protein 5 Nol5) Homo sapiens
Analyze
Symbol: AC018865.1
Name: pseudogene similar to part of nucleolar protein 5 Nol5
RGD ID: 16554118
Description:
Type: processed_pseudogene
Previously known as: AC018865.2
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl2130,082,092 - 130,082,220 (-)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:56
Count of miRNA genes:55
Interacting mature miRNAs:55
Transcripts:ENST00000423631
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium
Low 5 1 4 2 4 2 7 3 2 4 3 13 1
Below cutoff 7 5 6 3 4 4 13 4 8 3 10 12 1 1 5 2

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000423631
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2130,082,092 - 130,082,220 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AC018865.1 COSMIC
Ensembl Genes ENSG00000228471 Ensembl
GTEx ENSG00000228471 GTEx
Human Proteome Map AC018865.1 Human Proteome Map


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-04-30 AC018865.1  pseudogene similar to part of nucleolar protein 5 Nol5  AC018865.2  pseudogene similar to part of nucleolar protein 5 Nol5  Symbol and/or name change 19259462 PROVISIONAL