AL512326.4 (ribosomal protein L39-like (RPL39L) pseudogene) - Rat Genome Database

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Gene: AL512326.4 (ribosomal protein L39-like (RPL39L) pseudogene) Homo sapiens
Analyze
Symbol: AL512326.4
Name: ribosomal protein L39-like (RPL39L) pseudogene
RGD ID: 16554026
Description:
Type: processed_pseudogene
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl1179,271,116 - 179,271,266 (-)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:39
Count of miRNA genes:38
Interacting mature miRNAs:39
Transcripts:ENST00000426359
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system adipose tissue appendage
High
Medium
Low 4 6 1 1 2 6 1 1
Below cutoff 11 10 3 6 17 8 10 2 29 1 7 12

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000426359
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1179,271,116 - 179,271,266 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AL512326.4 COSMIC
Ensembl Genes ENSG00000228191 Ensembl
GTEx ENSG00000228191 GTEx
Human Proteome Map AL512326.4 Human Proteome Map