AL663058.1 (acid phosphatase 1, soluble (ACP1) pseudogene) - Rat Genome Database

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Gene: AL663058.1 (acid phosphatase 1, soluble (ACP1) pseudogene) Homo sapiens
Analyze
Symbol: AL663058.1
Name: acid phosphatase 1, soluble (ACP1) pseudogene
RGD ID: 16553208
Description:
Type: processed_pseudogene
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl1233,836,080 - 233,836,432 (-)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:269
Count of miRNA genes:258
Interacting mature miRNAs:267
Transcripts:ENST00000453379
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium
Low 17 30 29 1 39 44 16 30 2 41 33 1 8 32
Below cutoff 516 700 440 106 268 67 1012 508 845 53 337 339 42 265 695

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000453379
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1233,836,080 - 233,836,432 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AL663058.1 COSMIC
Ensembl Genes ENSG00000225486 Ensembl
GTEx ENSG00000225486 GTEx
Human Proteome Map AL663058.1 Human Proteome Map