Gene: LOC124903422 (small nucleolar RNA SNORD113/SNORD114 family) Homo sapiens |
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Analyze |
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Symbol: |
LOC124903422 (Ensembl: AL132709.5) |
Name: |
small nucleolar RNA SNORD113/SNORD114 family |
RGD ID: |
16552514 |
Description: |
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Type: |
snorna
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RefSeq Status: |
MODEL |
Previously known as: |
AL132709.5 |
Latest Assembly: |
GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl |
Position: |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 14 | 100,994,257 - 100,994,330 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 14 | 100,994,257 - 100,994,330 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | Cytogenetic Map | 14 | q32.31 | NCBI | | | | | T2T-CHM13v2.0 | 14 | 95,229,668 - 95,229,741 (+) | NCBI | | T2T-CHM13v2.0 | | |
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JBrowse: |
View Region in Genome Browser (JBrowse)
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Model |
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References
Genomics
miRNA Target Status
Predicted Target Of
Count of predictions: | 959 | Count of miRNA genes: | 643 | Interacting mature miRNAs: | 717 | Transcripts: | ENST00000410163, ENST00000414488, ENST00000427085, ENST00000434716, ENST00000443252, ENST00000554369, ENST00000554485, ENST00000555354, ENST00000556637, ENST00000556720 | Prediction methods: | Microtar, Miranda, Rnahybrid | Result types: | miRGate_prediction | |
Expression
RNA-SEQ Expression
High: > 1000 TPM value
Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM
Below Cutoff: < 0.5 TPM
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alimentary part of gastrointestinal system |
circulatory system |
endocrine system |
exocrine system |
hemolymphoid system |
hepatobiliary system |
integumental system |
musculoskeletal system |
nervous system |
renal system |
reproductive system |
respiratory system |
sensory system |
adipose tissue |
appendage |
entire extraembryonic component |
High |
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Medium |
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2
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1
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4
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1
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1
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3
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8
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2
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2
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1
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Low |
15
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5
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30
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17
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17
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17
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22
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23
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55
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8
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32
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23
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1
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1
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4
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1
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Below cutoff |
4
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1
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8
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3
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2
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6
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10
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2
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3
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9
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2
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1
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1
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Sequence
RefSeq Acc Id: |
ENST00000410163 |
Type: |
CODING |
Position: |
Human Assembly | Chr | Position (strand) | Source |
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GRCh38.p14 Ensembl | 14 | 100,994,257 - 100,994,330 (+) | Ensembl |
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RefSeq Acc Id: |
XR_007064400 |
Type: |
NON-CODING |
Position: |
Human Assembly | Chr | Position (strand) | Source |
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GRCh38 | 14 | 100,994,257 - 100,994,330 (+) | NCBI |
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RefSeq Acc Id: |
XR_007085194 |
Type: |
NON-CODING |
Position: |
Human Assembly | Chr | Position (strand) | Source |
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T2T-CHM13v2.0 | 14 | 95,229,668 - 95,229,741 (+) | NCBI |
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Additional Information
Nomenclature History
Date |
Current Symbol |
Current Name |
Previous Symbol |
Previous Name |
Description |
Reference |
Status |
2022-04-12 |
LOC124903422 |
small nucleolar RNA SNORD113/SNORD114 family |
AL132709.5 |
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Symbol and/or name change |
5135510 |
APPROVED |
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