AL035633.1 (forkhead box H1 (FOXH1) pseudogene) - Rat Genome Database

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Gene: AL035633.1 (forkhead box H1 (FOXH1) pseudogene) Homo sapiens
Analyze
Symbol: AL035633.1
Name: forkhead box H1 (FOXH1) pseudogene
RGD ID: 16552357
Description:
Type: processed_pseudogene
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl672,316,599 - 72,317,436 (-)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:368
Count of miRNA genes:302
Interacting mature miRNAs:334
Transcripts:ENST00000406139
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium
Low 2 3 1 97 1 2
Below cutoff 88 189 123 30 37 2 363 65 645 4 127 52 28 61 250

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000406139
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl672,316,599 - 72,317,436 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AL035633.1 COSMIC
Ensembl Genes ENSG00000218732 Ensembl
GTEx ENSG00000218732 GTEx
Human Proteome Map AL035633.1 Human Proteome Map