AL031985.1 (ribosomal protein L10a (RPL10A)) - Rat Genome Database

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Gene: AL031985.1 (ribosomal protein L10a (RPL10A)) Homo sapiens
Analyze
Symbol: AL031985.1
Name: ribosomal protein L10a (RPL10A)
RGD ID: 16551986
Description:
Type: processed_pseudogene
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl140,364,766 - 40,365,183 (+)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:140
Count of miRNA genes:137
Interacting mature miRNAs:140
Transcripts:ENST00000392713
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium 1
Low 15 56 9 4 151 4 27 5 12 1 8 67 19 17
Below cutoff 394 575 179 68 514 45 631 234 308 28 159 354 23 317 366

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000392713
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl140,364,766 - 40,365,183 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AL031985.1 COSMIC
Ensembl Genes ENSG00000213172 Ensembl
GTEx ENSG00000213172 GTEx
Human Proteome Map AL031985.1 Human Proteome Map