Y_RNA (Y RNA) - Rat Genome Database

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Gene: Y_RNA (Y RNA) Homo sapiens
Analyze
Symbol: Y_RNA
Name: Y RNA
RGD ID: 16551722
Description:
Type: misc_rna
Previously known as: AC010619.1
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl1949,566,672 - 49,566,772 (+)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:142
Count of miRNA genes:138
Interacting mature miRNAs:142
Transcripts:ENST00000384345
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium 1
Low 63 44 57 31 153 29 101 28 62 49 95 88 3 17 43
Below cutoff 107 131 57 17 98 12 139 78 146 24 51 63 6 67 69

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000384345
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1949,566,672 - 49,566,772 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC Y_RNA COSMIC
Ensembl Genes ENSG00000207073 Ensembl
GTEx ENSG00000207073 GTEx
Human Proteome Map Y_RNA Human Proteome Map


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-08-20 Y_RNA  Y RNA  AC010619.1    Symbol and/or name change 19259462 PROVISIONAL
2020-02-07 AC010619.1    Y_RNA  Y RNA  Symbol and/or name change 19259462 PROVISIONAL