AC074389.1 (lncRNA radiation induced regulator of PLK1 and RAD51) - Rat Genome Database

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Gene: AC074389.1 (lncRNA radiation induced regulator of PLK1 and RAD51) Homo sapiens
Analyze
Symbol: AC074389.1
Name: lncRNA radiation induced regulator of PLK1 and RAD51
RGD ID: 16551598
Description:
Type: lncrna
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl71,692,810 - 1,694,357 (-)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:541
Count of miRNA genes:425
Interacting mature miRNAs:467
Transcripts:ENST00000382528, ENST00000580559
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium
Low 2 1 1 2 2 1 356 2 1
Below cutoff 274 473 256 119 135 105 576 305 799 44 170 189 15 213 358

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000382528
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl71,692,810 - 1,694,325 (-)Ensembl
RefSeq Acc Id: ENST00000620671
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl71,693,050 - 1,693,972 (-)Ensembl
RefSeq Acc Id: ENST00000649710
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl71,693,259 - 1,694,357 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AC074389.1 COSMIC
Ensembl Genes ENSG00000205971 Ensembl
GTEx ENSG00000205971 GTEx
Human Proteome Map AC074389.1 Human Proteome Map


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-02-07 AC074389.1  lncRNA radiation induced regulator of PLK1 and RAD51  AC074389.1  novel transcript  Symbol and/or name change 19259462 PROVISIONAL