Vmn2r-ps1 (vomeronasal 2, receptor, pseudogene 1) - Rat Genome Database

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Gene: Vmn2r-ps1 (vomeronasal 2, receptor, pseudogene 1) Mus musculus
Analyze
Symbol: Vmn2r-ps1
Name: vomeronasal 2, receptor, pseudogene 1
RGD ID: 1642839
MGI Page MGI
Description:
Type: pseudo
RefSeq Status: INFERRED
Previously known as: EG623380; Feb06V2Rchr1-196.992; Gm6424
Related Functional Gene: Vmn2r84  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391194,972,853 - 194,973,747 (-)NCBIGRCm39GRCm39mm39
GRCm381195,290,545 - 195,291,439 (-)NCBIGRCm38GRCm38mm10GRCm38
MGSCv371197,116,739 - 197,117,633 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361196,991,257 - 196,992,157 (-)NCBIMGSCv36mm8
Celera1202,190,013 - 202,190,907 (-)NCBICelera
Cytogenetic Map1H6NCBI
cM Map198.51NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:17382427  


Genomics

Variants

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Variants in Vmn2r-ps1
10 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11039528Ccc3_mcolitis susceptibility in the Collaborative Cross 3 (mouse)13680142195051546Mouse
1301632Bw8q1_mbody weight at 8 weeks QTL 1 (mouse)Not determined1161201261195154279Mouse
1301339Hdlq15_mHDL QTL 15 (mouse)Not determined1165873675195154279Mouse
1302158Fembrs5_mfemur breaking strength 5 (mouse)Not determined1167462514195154279Mouse
1559024Zit1_mzinc induced tolerance 1 (mouse)Not determined1167462514195154279Mouse
4141483Femwf7_mfemur work to failure 7 (mouse)Not determined167462514195154279Mouse
1558802Skmw6_mskeletal muscle weight 6 (mouse)Not determined1167954584195154279Mouse
1301251Scc3_mcolon tumor susceptibility 3 (mouse)Not determined1168213823195154279Mouse
1301132Mors1_mmodifier of obesity related sterility 1 (mouse)Not determined1170379500195154279Mouse
1357732Tbbmd1_mtotal body bone mineral density 1 (mouse)Not determined1171983110195154279Mouse
11049575Lmr8b_mleishmaniasis resistance 8b (mouse)1172303451195154279Mouse
1301652Cpfd2_mcerebellum pattern fissures (mouse)Not determined1172303451195154279Mouse
10043863Swrl5_mSWR lupus locus 5 (mouse)Not determined1172303451195154279Mouse
12880426V25Dq2_mvitamin D inactive form serum level QTL 2 (mouse)1172532197195154279Mouse
12880429V25Dq1_mvitamin D inactive form serum level QTL 1 (mouse)1172632197195154279Mouse
1302023Orch4_mautoimmune orchitis resistance 4 (mouse)Not determined1175211318195154279Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NG_006787 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC109145 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
MGD MGI:3757942 ENTREZGENE
NCBI Gene 623380 ENTREZGENE
PhenoGen Vmn2r-ps1 PhenoGen