Mroh1 (maestro heat-like repeat family member 1) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: Mroh1 (maestro heat-like repeat family member 1) Rattus norvegicus
Analyze
Symbol: Mroh1
Name: maestro heat-like repeat family member 1
RGD ID: 1642414
Description: Predicted to be active in cytoplasm. Orthologous to human MROH1 (maestro heat like repeat family member 1); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A.
Type: protein-coding
RefSeq Status: MODEL
Previously known as: hypothetical protein LOC100125385; LOC100125385; maestro heat-like repeat-containing protein family member 1; MGC112690; uncharacterized protein LOC100125385
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr87109,979,344 - 110,052,800 (+)NCBIGRCr8
mRatBN7.27108,098,708 - 108,172,146 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl7108,102,734 - 108,172,146 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.07117,445,191 - 117,472,418 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7117,445,144 - 117,514,612 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.07117,432,821 - 117,460,047 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47114,429,802 - 114,457,907 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera7104,455,054 - 104,482,162 (+)NCBICelera
Cytogenetic Map7q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IBA)

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932   PMID:15632090  


Genomics

Comparative Map Data
Mroh1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr87109,979,344 - 110,052,800 (+)NCBIGRCr8
mRatBN7.27108,098,708 - 108,172,146 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl7108,102,734 - 108,172,146 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.07117,445,191 - 117,472,418 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7117,445,144 - 117,514,612 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.07117,432,821 - 117,460,047 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47114,429,802 - 114,457,907 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera7104,455,054 - 104,482,162 (+)NCBICelera
Cytogenetic Map7q34NCBI
MROH1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh388144,148,016 - 144,261,926 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl8144,148,016 - 144,261,927 (+)EnsemblGRCh38hg38GRCh38
GRCh378145,202,919 - 145,316,829 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 368145,274,907 - 145,388,831 (+)NCBINCBI36Build 36hg18NCBI36
Celera8141,546,188 - 141,660,711 (+)NCBICelera
Cytogenetic Map8q24.3NCBI
HuRef8140,485,244 - 140,600,472 (+)NCBIHuRef
CHM1_18145,256,117 - 145,357,077 (+)NCBICHM1_1
T2T-CHM13v2.08145,314,737 - 145,430,696 (+)NCBIT2T-CHM13v2.0
Mroh1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391576,264,638 - 76,337,239 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1576,264,461 - 76,337,238 (+)EnsemblGRCm39 Ensembl
GRCm381576,380,438 - 76,453,039 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1576,380,261 - 76,453,038 (+)EnsemblGRCm38mm10GRCm38
MGSCv371576,210,943 - 76,283,469 (+)NCBIGRCm37MGSCv37mm9NCBIm37
Celera1577,880,621 - 77,953,472 (+)NCBICelera
Cytogenetic Map15D3NCBI
cM Map1535.8NCBI
Mroh1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554542,799,728 - 2,882,610 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554542,799,727 - 2,882,610 (+)NCBIChiLan1.0ChiLan1.0
MROH1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v27161,635,725 - 161,747,541 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan18137,165,635 - 137,277,673 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v08140,912,479 - 141,024,345 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.18143,904,956 - 144,015,354 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl8143,920,577 - 144,017,616 (+)Ensemblpanpan1.1panPan2
MROH1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11337,645,810 - 37,698,550 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1337,645,876 - 37,698,342 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1337,594,818 - 37,662,349 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01338,107,382 - 38,174,915 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1338,107,411 - 38,177,268 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11337,779,409 - 37,847,101 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01337,908,071 - 37,975,737 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01338,384,288 - 38,452,032 (+)NCBIUU_Cfam_GSD_1.0
Mroh1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303551,239 - 623,332 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364707,977,525 - 8,039,096 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364707,977,338 - 8,049,414 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MROH1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl4507,228 - 577,132 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.14507,223 - 577,859 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.24638,107 - 681,112 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MROH1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.18138,357,119 - 138,473,212 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl8138,357,843 - 138,473,001 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660391,392,672 - 1,513,920 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mroh1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473512,586,095 - 12,673,896 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473512,586,095 - 12,673,910 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Mroh1
408 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:35
Count of miRNA genes:35
Interacting mature miRNAs:35
Transcripts:ENSRNOT00000051754
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
634336Anxrr17Anxiety related response QTL 173.66locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)7924703115097879Rat
61357Bp38Blood pressure QTL 381.60.052arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)741333674119109060Rat
1358361Sradr5Stress Responsive Adrenal Weight QTL 55.55adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)743747012108555253Rat
1300179Kidm5Kidney mass QTL 53.51kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)743747012135012528Rat
631504Cm27Cardiac mass QTL 273.45heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)744421311118198041Rat
70173Niddm19Non-insulin dependent diabetes mellitus QTL 194.330.00005blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)764002457135012528Rat
2316947Rf58Renal function QTL 587.8kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)768938720113886318Rat
2316952Pur22Proteinuria QTL 225.2urine protein amount (VT:0005160)urine protein level (CMO:0000591)768938720113886318Rat
2316955Stl24Serum triglyceride level QTL 247.1blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)768938720113886318Rat
631540Bw9Body weight QTL 94.5body mass (VT:0001259)body weight (CMO:0000012)769736226117455174Rat
1357338Stl17Serum triglyceride level QTL 173.23blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)769736356112729554Rat
634331Pia17Pristane induced arthritis QTL 174.7joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)773829340130221005Rat
7411654Foco25Food consumption QTL 259.30.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)775918751120918751Rat
7411607Foco15Food consumption QTL 150.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)775918751120918751Rat
631529Tls2T-lymphoma susceptibility QTL 200.001thymus integrity trait (VT:0010555)percentage of study population developing T-cell lymphomas during a period of time (CMO:0001911)780221299109401111Rat
1331746Kidm9Kidney mass QTL 93.934kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)780221299112308525Rat
1331728Bp214Blood pressure QTL 2142.825arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)780221299124373579Rat
1331768Kidm10Kidney mass QTL 104.62096kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)780221299125221299Rat
2317052Aia17Adjuvant induced arthritis QTL 172.13joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)781737938126737938Rat
634322Bw12Body weight QTL 120body mass (VT:0001259)body weight (CMO:0000012)783153392128153392Rat
1358891Bp265Blood pressure QTL 2652.21arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)783591953134666232Rat
1358914Bp266Blood pressure QTL 266arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)783591953134666232Rat
71114Niddm14Non-insulin dependent diabetes mellitus QTL 144.5blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)784257275129257275Rat
2298475Eau6Experimental allergic uveoretinitis QTL 60.0029uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)784257275129257275Rat
1558655Swd4Spike wave discharge measurement QTL 43.680.0002brain electrophysiology trait (VT:0010557)brain spike-and-wave discharge severity grade (CMO:0001988)786983365131983365Rat
1549899Stresp8Stress response QTL 84.370.0008stress-related behavior trait (VT:0010451)defensive burying duration (CMO:0001961)790482196135012528Rat
2299163Iddm34Insulin dependent diabetes mellitus QTL 342.71blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)791281130135012528Rat
631687Hcas1Hepatocarcinoma susceptibility QTL 13.90.001liver integrity trait (VT:0010547)liver tumorous lesion volume to total liver volume ratio (CMO:0001082)791412594129807172Rat
2313102Bmd79Bone mineral density QTL 792.30.0001tibia mineral mass (VT:1000283)total volumetric bone mineral density (CMO:0001728)794811085116738842Rat
1357336Gluco6Glucose level QTL 63.4blood glucose amount (VT:0000188)serum glucose level (CMO:0000543)794811326116294265Rat
731176Glom5Glomerulus QTL 52.50.0035kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)796670164135012528Rat
1331731Bp216Blood pressure QTL 2162.851arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)7102297359133492884Rat
70159Bp61Blood pressure QTL 610.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)7103146217116738842Rat
731174Uae23Urinary albumin excretion QTL 232.40.0042urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)7104603555135012528Rat
2306821Bp335Blood pressure QTL 3350.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)7106571501135012528Rat


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 39 25 9 19 9 2 68 35 37 11
Low 4 32 32 32 8 9 6 4 8
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001103364 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039080541 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039080542 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039080543 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039080544 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039080545 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039080548 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039080549 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039080550 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039080551 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039080552 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063264675 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063264676 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063264678 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063264679 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005487519 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC128853 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC093388 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473950 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000007 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSRNOT00000051754   ⟹   ENSRNOP00000044432
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl7108,114,813 - 108,129,746 (+)Ensembl
Rnor_6.0 Ensembl7117,456,039 - 117,472,182 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000081632   ⟹   ENSRNOP00000069302
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl7108,102,734 - 108,172,146 (+)Ensembl
Rnor_6.0 Ensembl7117,445,144 - 117,514,612 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000105527   ⟹   ENSRNOP00000076889
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl7108,102,734 - 108,172,146 (+)Ensembl
RefSeq Acc Id: XM_039080541   ⟹   XP_038936469
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,979,344 - 110,052,800 (+)NCBI
mRatBN7.27108,098,708 - 108,172,026 (+)NCBI
RefSeq Acc Id: XM_039080542   ⟹   XP_038936470
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,983,303 - 110,052,800 (+)NCBI
mRatBN7.27108,102,638 - 108,172,146 (+)NCBI
RefSeq Acc Id: XM_039080543   ⟹   XP_038936471
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,983,303 - 110,052,800 (+)NCBI
mRatBN7.27108,102,638 - 108,172,146 (+)NCBI
RefSeq Acc Id: XM_039080544   ⟹   XP_038936472
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,983,302 - 110,052,677 (+)NCBI
mRatBN7.27108,102,638 - 108,172,146 (+)NCBI
RefSeq Acc Id: XM_039080545   ⟹   XP_038936473
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,983,303 - 110,052,800 (+)NCBI
mRatBN7.27108,102,638 - 108,172,146 (+)NCBI
RefSeq Acc Id: XM_039080548   ⟹   XP_038936476
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,983,302 - 110,052,800 (+)NCBI
mRatBN7.27108,102,638 - 108,172,146 (+)NCBI
RefSeq Acc Id: XM_039080549   ⟹   XP_038936477
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,995,866 - 110,052,800 (+)NCBI
mRatBN7.27108,115,178 - 108,172,146 (+)NCBI
RefSeq Acc Id: XM_039080550   ⟹   XP_038936478
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,983,302 - 110,052,800 (+)NCBI
mRatBN7.27108,102,638 - 108,172,146 (+)NCBI
RefSeq Acc Id: XM_039080551   ⟹   XP_038936479
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,983,301 - 110,047,402 (+)NCBI
mRatBN7.27108,102,638 - 108,166,747 (+)NCBI
RefSeq Acc Id: XM_039080552   ⟹   XP_038936480
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,983,301 - 110,043,543 (+)NCBI
mRatBN7.27108,102,638 - 108,162,889 (+)NCBI
RefSeq Acc Id: XM_063264675   ⟹   XP_063120745
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,983,402 - 110,052,800 (+)NCBI
RefSeq Acc Id: XM_063264676   ⟹   XP_063120746
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,983,302 - 110,052,800 (+)NCBI
RefSeq Acc Id: XM_063264678   ⟹   XP_063120748
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,983,302 - 110,052,800 (+)NCBI
RefSeq Acc Id: XM_063264679   ⟹   XP_063120749
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,983,301 - 110,043,543 (+)NCBI
RefSeq Acc Id: XR_005487519
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,983,300 - 110,036,916 (+)NCBI
mRatBN7.27108,102,638 - 108,166,792 (+)NCBI
Reference Protein Sequences
RefSeq Acc Id: ENSRNOP00000044432   ⟸   ENSRNOT00000051754
RefSeq Acc Id: ENSRNOP00000069302   ⟸   ENSRNOT00000081632
RefSeq Acc Id: XP_038936469   ⟸   XM_039080541
- Peptide Label: isoform X1
- UniProtKB: A0A0G2JV05 (UniProtKB/TrEMBL),   A0A8I5Y774 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038936472   ⟸   XM_039080544
- Peptide Label: isoform X3
- UniProtKB: A0A8I5Y774 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038936470   ⟸   XM_039080542
- Peptide Label: isoform X1
- UniProtKB: A0A0G2JV05 (UniProtKB/TrEMBL),   A0A8I5Y774 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038936476   ⟸   XM_039080548
- Peptide Label: isoform X5
- UniProtKB: A0A8I5Y774 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038936478   ⟸   XM_039080550
- Peptide Label: isoform X8
- UniProtKB: A0A8I5Y774 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038936471   ⟸   XM_039080543
- Peptide Label: isoform X2
- UniProtKB: A6HS97 (UniProtKB/TrEMBL),   A0A8I5Y774 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038936473   ⟸   XM_039080545
- Peptide Label: isoform X4
- UniProtKB: A0A8I5Y774 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038936479   ⟸   XM_039080551
- Peptide Label: isoform X10
RefSeq Acc Id: XP_038936480   ⟸   XM_039080552
- Peptide Label: isoform X11
RefSeq Acc Id: XP_038936477   ⟸   XM_039080549
- Peptide Label: isoform X6
- UniProtKB: A0A8I5Y774 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSRNOP00000076889   ⟸   ENSRNOT00000105527
RefSeq Acc Id: XP_063120749   ⟸   XM_063264679
- Peptide Label: isoform X12
RefSeq Acc Id: XP_063120746   ⟸   XM_063264676
- Peptide Label: isoform X7
RefSeq Acc Id: XP_063120748   ⟸   XM_063264678
- Peptide Label: isoform X9
RefSeq Acc Id: XP_063120745   ⟸   XM_063264675
- Peptide Label: isoform X1
- UniProtKB: A0A0G2JV05 (UniProtKB/TrEMBL)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A0G2JV05-F1-model_v2 AlphaFold A0A0G2JV05 1-1640 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13695421
Promoter ID:EPDNEW_R5945
Type:initiation region
Name:Mroh1_1
Description:maestro heat-like repeat family member 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.07117,445,180 - 117,445,240EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1642414 AgrOrtholog
BioCyc Gene G2FUF-32931 BioCyc
Ensembl Genes ENSRNOG00000030355 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000051754.5 UniProtKB/TrEMBL
  ENSRNOT00000081632.2 UniProtKB/TrEMBL
  ENSRNOT00000105527.1 UniProtKB/TrEMBL
Gene3D-CATH 1.25.10.10 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7389659 IMAGE-MGC_LOAD
InterPro ARM-like UniProtKB/TrEMBL
  ARM-type_fold UniProtKB/TrEMBL
  HEAT UniProtKB/TrEMBL
  HEAT_type_2 UniProtKB/TrEMBL
  Maestro_heat-like_prot UniProtKB/TrEMBL
  Maestro_HEAT_rpt UniProtKB/TrEMBL
MGC_CLONE MGC:112690 IMAGE-MGC_LOAD
NCBI Gene 100125385 ENTREZGENE
PANTHER MAESTRO HEAT-LIKE REPEAT-CONTAINING PROTEIN FAMILY MEMBER 1 UniProtKB/TrEMBL
  PTHR23120 UniProtKB/TrEMBL
Pfam HEAT UniProtKB/TrEMBL
  Maestro_HEAT UniProtKB/TrEMBL
PhenoGen Mroh1 PhenoGen
PROSITE HEAT_REPEAT UniProtKB/TrEMBL
RatGTEx ENSRNOG00000030355 RatGTEx
Superfamily-SCOP ARM-type_fold UniProtKB/TrEMBL
UniProt A0A0G2JV05 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5Y774 ENTREZGENE, UniProtKB/TrEMBL
  A6HS97 ENTREZGENE, UniProtKB/TrEMBL
  F7EKX9_RAT UniProtKB/TrEMBL
  Q566Q7_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-08-01 Mroh1  maestro heat-like repeat family member 1  LOC100125385  hypothetical protein LOC100125385  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2007-09-15 LOC100125385  hypothetical protein LOC100125385      Symbol and Name status set to provisional 70820 PROVISIONAL