Vom2r-ps129 (vomeronasal 2 receptor, pseudogene 129) - Rat Genome Database

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Gene: Vom2r-ps129 (vomeronasal 2 receptor, pseudogene 129) Rattus norvegicus
Analyze
Symbol: Vom2r-ps129
Name: vomeronasal 2 receptor, pseudogene 129
RGD ID: 1626002
Description:
Type: pseudo
RefSeq Status: INFERRED
Previously known as: vomeronasal 2 receptor 129 pseudogene
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr814979,415 - 979,758 (+)NCBIGRCr8
mRatBN7.214835,007 - 835,350 (+)NCBImRatBN7.2mRatBN7.2
Rnor_6.0141,722,485 - 1,722,828 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0141,717,716 - 1,718,059 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4141,348,194 - 1,348,537 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera14947,466 - 947,809 (-)NCBICelera
Cytogenetic Map14p22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:17382427  


Genomics

Variants

.
Variants in Vom2r-ps129
9 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2300159Bmd61Bone mineral density QTL 615.30.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)14126541967Rat
2300183Bmd60Bone mineral density QTL 605.70.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)14126541967Rat
619619Rf4Renal disease susceptibility QTL 44.10.002urine total protein amount (VT:0000032)urine protein excretion rate to body weight ratio (CMO:0001099)14132754612Rat
634352Apr6Acute phase response QTL 63.7blood interleukin-6 amount (VT:0008595)plasma interleukin-6 level (CMO:0001927)14141131407Rat


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NG_006283 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000014 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-16693 BioCyc
NCBI Gene 100101368 ENTREZGENE
PhenoGen Vom2r-ps129 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-07-23 Vom2r-ps129  vomeronasal 2 receptor, pseudogene 129    vomeronasal 2 receptor 129 pseudogene  Symbol and Name updated 1299863 APPROVED
2007-07-07 Vom2r-ps129  vomeronasal 2 receptor 129 pseudogene      Symbol and Name status set to provisional 70820 PROVISIONAL