Gm7680 (predicted gene 7680) - Rat Genome Database

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Gene: Gm7680 (predicted gene 7680) Mus musculus
Analyze
Symbol: Gm7680
Name: predicted gene 7680
RGD ID: 1613768
MGI Page MGI
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: EG665548
Related Functional Gene: Btbd10  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39917,933,506 - 17,934,866 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl917,933,520 - 17,934,867 (+)EnsemblGRCm39 Ensembl
GRCm38918,022,210 - 18,023,570 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl918,022,224 - 18,023,571 (+)EnsemblGRCm38mm10GRCm38
MGSCv37917,826,654 - 17,828,014 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36917,771,554 - 17,773,966 (+)NCBIMGSCv36mm8
Celera915,306,475 - 15,307,834 (+)NCBICelera
Cytogenetic Map9A2NCBI
cM Map97.01NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Gm7680
55 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142326Tgq19_mtriglyceride QTL 19 (mouse)Not determined121060750Mouse
1300899Chol6_mcholesterol 6 (mouse)Not determined9129902913Mouse
13434920Dcollq1_mdifferential colonization level QTL 1 (mouse)9130341840Mouse
35673312Ari7_mantibody response to influenza 7, day 45, IgG3 (mouse)9780000122211296Mouse
1300849Sles4_msystemic lupus erythmatosus suppressor 4 (mouse)Not determined9910756237306370Mouse
13504833Bglu19_mblood glucose level 19 (mouse)9991076843910768Mouse
1300532Tbs2_mtuberculosis severity 2 (mouse)Not determined91236997046370114Mouse
10043917Obq37_mobesity QTL 37 (mouse)Not determined91339117547391175Mouse
1357637Si5lq2_mserum IGFBP-5 level QTL 2 (mouse)Not determined91541175149411890Mouse
4141591Cq4_mcholesterol QTL 4 (mouse)Not determined91541175149411890Mouse
1301421Lgth4_mbody length 4 (mouse)Not determined91541175149411890Mouse
4141447Cfmq2_mcystic fibrosis modifier QTL 2 (mouse)Not determined91541175149411890Mouse
12790993Adq1_maortic diameter QTL 1 (mouse)91574962749749627Mouse
11354951Pdcc3_mplasmacytoid dentritic cell compartment 3 (mouse)91574962749749627Mouse
12790997Adq2_maortic diameter QTL 2 (mouse)91574962749749627Mouse
12880415V125Dq7_mvitamin D active form serum level QTL 7 (mouse)91601129650011296Mouse
12880416V125Dq8_mvitamin D active form serum level QTL 8 (mouse)91601129650011296Mouse
13504834Hdlq109_mHDL QTL 109 (mouse)91670964150709641Mouse
1357465Vtbt6_mvertebral trabecular bone trait 6 (mouse)Not determined91697884050978943Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NG_020948 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC154319 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000216198
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl917,933,520 - 17,934,867 (+)Ensembl
GRCm38.p6 Ensembl918,022,224 - 18,023,571 (+)Ensembl

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000111263 Ensembl, ENTREZGENE
MGD MGI:3646083 ENTREZGENE
NCBI Gene 665548 ENTREZGENE
PhenoGen Gm7680 PhenoGen