MIR22HG (MIR22 host gene) - Rat Genome Database

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Gene: MIR22HG (MIR22 host gene) Homo sapiens
Analyze
Symbol: MIR22HG
Name: MIR22 host gene
RGD ID: 1605910
HGNC Page HGNC:28219
Description: Predicted to act upstream of or within response to wounding. Predicted to be part of RISC complex.
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: VALIDATED
Previously known as: C17orf91; DKFZp686O06159; MGC14376; MGC149751
RGD Orthologs
Mouse
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38171,711,504 - 1,716,272 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl171,711,447 - 1,717,174 (-)EnsemblGRCh38hg38GRCh38
GRCh37171,614,798 - 1,619,566 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36171,561,553 - 1,566,255 (-)NCBINCBI36Build 36hg18NCBI36
Celera171,630,502 - 1,635,274 (-)NCBICelera
Cytogenetic Map17p13.3NCBI
HuRef171,514,486 - 1,519,258 (-)NCBIHuRef
CHM1_1171,624,565 - 1,629,337 (-)NCBICHM1_1
T2T-CHM13v2.0171,600,429 - 1,605,201 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
RISC complex  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8619474   PMID:9110174   PMID:12477932   PMID:16341674   PMID:16344560   PMID:20705733   PMID:23022100   PMID:24036268   PMID:25171338   PMID:26760575   PMID:27535740   PMID:28065597  
PMID:28968955   PMID:29669758   PMID:29775889   PMID:29880327   PMID:30539522   PMID:30680848   PMID:30856284   PMID:31291201   PMID:32094308   PMID:32127004   PMID:32233607   PMID:32500915  
PMID:32732881   PMID:33267888   PMID:33624428   PMID:33635234   PMID:34187303   PMID:34373436   PMID:34446703   PMID:35527483   PMID:35611601   PMID:37479878   PMID:37910254   PMID:38011754  


Genomics

Comparative Map Data
MIR22HG
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38171,711,504 - 1,716,272 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl171,711,447 - 1,717,174 (-)EnsemblGRCh38hg38GRCh38
GRCh37171,614,798 - 1,619,566 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36171,561,553 - 1,566,255 (-)NCBINCBI36Build 36hg18NCBI36
Celera171,630,502 - 1,635,274 (-)NCBICelera
Cytogenetic Map17p13.3NCBI
HuRef171,514,486 - 1,519,258 (-)NCBIHuRef
CHM1_1171,624,565 - 1,629,337 (-)NCBICHM1_1
T2T-CHM13v2.0171,600,429 - 1,605,201 (-)NCBIT2T-CHM13v2.0
Mir22hg
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391175,352,365 - 75,357,516 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1175,352,365 - 75,357,502 (+)EnsemblGRCm39 Ensembl
GRCm381175,461,539 - 75,466,690 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1175,461,539 - 75,466,676 (+)EnsemblGRCm38mm10GRCm38
MGSCv371175,275,041 - 75,280,192 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361175,275,312 - 75,279,020 (+)NCBIMGSCv36mm8
Celera1182,969,935 - 82,975,086 (+)NCBICelera
Cytogenetic Map11B5NCBI
cM Map1145.91NCBI

Variants

.
Variants in MIR22HG
4 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 17p13.3(chr17:198748-1920952)x1 copy number loss See cases [RCV000133787] Chr17:198748..1920952 [GRCh38]
Chr17:50690..1824246 [GRCh37]
Chr17:48539..1770996 [NCBI36]
Chr17:17p13.3		 pathogenic
GRCh38/hg38 17p13.3-13.1(chr17:162088-6959050)x1 copy number loss See cases [RCV000134135] Chr17:162088..6959050 [GRCh38]
Chr17:45835..6862369 [GRCh37]
Chr17:11879..6803093 [NCBI36]
Chr17:17p13.3-13.1		 pathogenic
GRCh38/hg38 17p13.3(chr17:1209808-1931101)x3 copy number gain See cases [RCV000135342] Chr17:1209808..1931101 [GRCh38]
Chr17:1113102..1834395 [GRCh37]
Chr17:1059852..1781145 [NCBI36]
Chr17:17p13.3		 pathogenic
GRCh38/hg38 17p13.3-13.1(chr17:198748-7491129)x3 copy number gain See cases [RCV000134970] Chr17:198748..7491129 [GRCh38]
Chr17:50690..7394448 [GRCh37]
Chr17:48539..7335172 [NCBI36]
Chr17:17p13.3-13.1		 pathogenic
GRCh38/hg38 17p13.3(chr17:198748-2685361)x1 copy number loss See cases [RCV000134971] Chr17:198748..2685361 [GRCh38]
Chr17:50690..2588655 [GRCh37]
Chr17:48539..2535405 [NCBI36]
Chr17:17p13.3		 pathogenic
GRCh38/hg38 17p13.3-13.2(chr17:226472-3655099)x1 copy number loss See cases [RCV000135857] Chr17:226472..3655099 [GRCh38]
Chr17:396627..3558393 [GRCh37]
Chr17:76263..3505142 [NCBI36]
Chr17:17p13.3-13.2		 pathogenic
GRCh38/hg38 17p13.3(chr17:1227482-2261786)x3 copy number gain See cases [RCV000136639] Chr17:1227482..2261786 [GRCh38]
Chr17:1130776..2165080 [GRCh37]
Chr17:1077526..2111830 [NCBI36]
Chr17:17p13.3		 likely pathogenic|uncertain significance
GRCh38/hg38 17p13.3-13.2(chr17:1348488-3513273)x3 copy number gain See cases [RCV000137603] Chr17:1348488..3513273 [GRCh38]
Chr17:1251782..3416567 [GRCh37]
Chr17:1198532..3363317 [NCBI36]
Chr17:17p13.3-13.2		 likely pathogenic
GRCh38/hg38 17p13.3-13.1(chr17:162016-7697012)x1 copy number loss See cases [RCV000138214] Chr17:162016..7697012 [GRCh38]
Chr17:45835..7600330 [GRCh37]
Chr17:11807..7541055 [NCBI36]
Chr17:17p13.3-13.1		 pathogenic
GRCh38/hg38 17p13.3(chr17:162016-1904358)x1 copy number loss See cases [RCV000137940] Chr17:162016..1904358 [GRCh38]
Chr17:45835..1807652 [GRCh37]
Chr17:11807..1754402 [NCBI36]
Chr17:17p13.3		 likely pathogenic
GRCh38/hg38 17p13.3(chr17:162016-2099130)x1 copy number loss See cases [RCV000138246] Chr17:162016..2099130 [GRCh38]
Chr17:45835..2002424 [GRCh37]
Chr17:11807..1949174 [NCBI36]
Chr17:17p13.3		 likely pathogenic
GRCh38/hg38 17p13.3(chr17:1227392-2261993)x1 copy number loss See cases [RCV000138512] Chr17:1227392..2261993 [GRCh38]
Chr17:1130686..2165287 [GRCh37]
Chr17:1077436..2112037 [NCBI36]
Chr17:17p13.3		 pathogenic
GRCh38/hg38 17p13.3-12(chr17:162016-12343901)x3 copy number gain See cases [RCV000138531] Chr17:162016..12343901 [GRCh38]
Chr17:45835..12247218 [GRCh37]
Chr17:11807..12187943 [NCBI36]
Chr17:17p13.3-12		 pathogenic
GRCh38/hg38 17p13.3-13.2(chr17:150732-5935377)x1 copy number loss See cases [RCV000141658] Chr17:150732..5935377 [GRCh38]
Chr17:525..5838697 [GRCh37]
Chr17:525..5779421 [NCBI36]
Chr17:17p13.3-13.2		 pathogenic
GRCh38/hg38 17p13.3-13.2(chr17:237248-4735533)x1 copy number loss See cases [RCV000141559] Chr17:237248..4735533 [GRCh38]
Chr17:396627..4638828 [GRCh37]
Chr17:87039..4585577 [NCBI36]
Chr17:17p13.3-13.2		 pathogenic
GRCh38/hg38 17p13.3(chr17:150732-3242868)x1 copy number loss See cases [RCV000142323] Chr17:150732..3242868 [GRCh38]
Chr17:525..3146162 [GRCh37]
Chr17:525..3092912 [NCBI36]
Chr17:17p13.3		 pathogenic
GRCh38/hg38 17p13.3-13.2(chr17:198748-4265640)x1 copy number loss See cases [RCV000142440] Chr17:198748..4265640 [GRCh38]
Chr17:50690..4168935 [GRCh37]
Chr17:48539..4115684 [NCBI36]
Chr17:17p13.3-13.2		 pathogenic
GRCh38/hg38 17p13.3(chr17:1227482-2082382)x1 copy number loss See cases [RCV000143179] Chr17:1227482..2082382 [GRCh38]
Chr17:1130776..1985676 [GRCh37]
Chr17:1077526..1932426 [NCBI36]
Chr17:17p13.3		 likely pathogenic
GRCh38/hg38 17p13.3(chr17:1065649-2261786)x1 copy number loss See cases [RCV000050815] Chr17:1065649..2261786 [GRCh38]
Chr17:968889..2165080 [GRCh37]
Chr17:915639..2111830 [NCBI36]
Chr17:17p13.3		 pathogenic
GRCh38/hg38 17p13.3(chr17:198748-3102332)x1 copy number loss See cases [RCV000050936] Chr17:198748..3102332 [GRCh38]
Chr17:50690..3005626 [GRCh37]
Chr17:48539..2952376 [NCBI36]
Chr17:17p13.3		 pathogenic
GRCh38/hg38 17p13.3(chr17:644280-2193615)x3 copy number gain See cases [RCV000051125] Chr17:644280..2193615 [GRCh38]
Chr17:547520..2096909 [GRCh37]
Chr17:494270..2043659 [NCBI36]
Chr17:17p13.3		 pathogenic
GRCh38/hg38 17p13.3(chr17:198748-2261786)x1 copy number loss See cases [RCV000051148] Chr17:198748..2261786 [GRCh38]
Chr17:50690..2165080 [GRCh37]
Chr17:48539..2111830 [NCBI36]
Chr17:17p13.3		 pathogenic
GRCh38/hg38 17p13.3(chr17:1287199-3154232)x3 copy number gain See cases [RCV000052448] Chr17:1287199..3154232 [GRCh38]
Chr17:1190493..3057526 [GRCh37]
Chr17:1137243..3004276 [NCBI36]
Chr17:17p13.3		 pathogenic
GRCh38/hg38 17p13.3(chr17:234496-2385512)x3 copy number gain See cases [RCV000052429] Chr17:234496..2385512 [GRCh38]
Chr17:396627..2288806 [GRCh37]
Chr17:84287..2235556 [NCBI36]
Chr17:17p13.3		 pathogenic
GRCh38/hg38 17p13.3(chr17:436763-2527511)x3 copy number gain See cases [RCV000052432] Chr17:436763..2527511 [GRCh38]
Chr17:396627..2430805 [GRCh37]
Chr17:286785..2377555 [NCBI36]
Chr17:17p13.3		 pathogenic
GRCh38/hg38 17p13.3(chr17:445331-2385512)x3 copy number gain See cases [RCV000052434] Chr17:445331..2385512 [GRCh38]
Chr17:396627..2288806 [GRCh37]
Chr17:295350..2235556 [NCBI36]
Chr17:17p13.3		 pathogenic
GRCh38/hg38 17p13.3-13.2(chr17:193307-5652222)x1 copy number loss See cases [RCV000053384] Chr17:193307..5652222 [GRCh38]
Chr17:45835..5555542 [GRCh37]
Chr17:43098..5496266 [NCBI36]
Chr17:17p13.3-13.2		 pathogenic
GRCh38/hg38 17p13.3-13.2(chr17:198748-3436345)x1 copy number loss Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053386]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053386]|See cases [RCV000053386] Chr17:198748..3436345 [GRCh38]
Chr17:50690..3339639 [GRCh37]
Chr17:48539..3286389 [NCBI36]
Chr17:17p13.3-13.2		 pathogenic
GRCh38/hg38 17p13.3(chr17:1113701-1844036)x3 copy number gain Chromosome 17p13.3 duplication syndrome [RCV001199954] Chr17:1113701..1844036 [GRCh38]
Chr17:17p13.3		 pathogenic
GRCh38/hg38 17p13.3-12(chr17:165730-11404096)x3 copy number gain Chromosome 17p13.3 duplication syndrome [RCV003327726] Chr17:165730..11404096 [GRCh38]
Chr17:17p13.3-12		 pathogenic
GRCh38/hg38 17p13.3-12(chr17:150732-14764202)x3 copy number gain See cases [RCV000142236] Chr17:150732..14764202 [GRCh38]
Chr17:525..14667519 [GRCh37]
Chr17:525..14608244 [NCBI36]
Chr17:17p13.3-12		 pathogenic
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:4148
Count of miRNA genes:903
Interacting mature miRNAs:1099
Transcripts:ENST00000334146, ENST00000570416, ENST00000571091, ENST00000571595, ENST00000573075, ENST00000573127, ENST00000574016, ENST00000574306, ENST00000575626, ENST00000576489, ENST00000576749, ENST00000577164, ENST00000608198, ENST00000608245, ENST00000608913, ENST00000609398, ENST00000609442, ENST00000609990, ENST00000610106
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
RH12131  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37171,614,832 - 1,614,951UniSTSGRCh37
Build 36171,561,582 - 1,561,701RGDNCBI36
Celera171,630,540 - 1,630,659RGD
Cytogenetic Map17p13.3UniSTS
HuRef171,514,524 - 1,514,643UniSTS
GeneMap99-GB4 RH Map1724.48UniSTS
WI-17501  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37171,615,030 - 1,615,155UniSTSGRCh37
Build 36171,561,780 - 1,561,905RGDNCBI36
Celera171,630,738 - 1,630,863RGD
Cytogenetic Map17p13.3UniSTS
HuRef171,514,722 - 1,514,847UniSTS
GeneMap99-GB4 RH Map1717.65UniSTS
Whitehead-RH Map1740.8UniSTS
NCBI RH Map1733.0UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High
Medium 2125 2198 1515 413 814 280 3686 1819 1167 330 1033 1477 147 1170 2433 5 1
Low 314 790 211 211 1117 185 668 377 2563 89 426 134 28 1 34 355 1 1
Below cutoff 3 18 3 1 4 1 2

Sequence

Nucleotide Sequences
RefSeq Transcripts NR_028502 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_028503 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_028504 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_028505 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC130343 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF070569 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI147777 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC007813 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC070225 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC119720 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC119721 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BI756450 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM755383 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX509423 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX640650 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX648321 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471108 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068261 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA543295 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENST00000334146
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl171,711,447 - 1,716,282 (-)Ensembl
RefSeq Acc Id: ENST00000570416
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl171,711,519 - 1,716,235 (-)Ensembl
RefSeq Acc Id: ENST00000571091
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl171,711,519 - 1,716,211 (-)Ensembl
RefSeq Acc Id: ENST00000571595
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl171,711,519 - 1,716,341 (-)Ensembl
RefSeq Acc Id: ENST00000573075
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl171,711,519 - 1,716,247 (-)Ensembl
RefSeq Acc Id: ENST00000573127
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl171,712,361 - 1,716,211 (-)Ensembl
RefSeq Acc Id: ENST00000574016
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl171,711,504 - 1,716,274 (-)Ensembl
RefSeq Acc Id: ENST00000574306
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl171,711,504 - 1,716,251 (-)Ensembl
RefSeq Acc Id: ENST00000575626
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl171,711,507 - 1,716,211 (-)Ensembl
RefSeq Acc Id: ENST00000576489
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl171,711,507 - 1,716,247 (-)Ensembl
RefSeq Acc Id: ENST00000576749
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl171,711,504 - 1,716,257 (-)Ensembl
RefSeq Acc Id: ENST00000577164
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl171,711,503 - 1,717,174 (-)Ensembl
RefSeq Acc Id: ENST00000608198
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl171,711,504 - 1,716,280 (-)Ensembl
RefSeq Acc Id: ENST00000608245
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl171,711,718 - 1,716,243 (-)Ensembl
RefSeq Acc Id: ENST00000608913
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl171,711,504 - 1,716,273 (-)Ensembl
RefSeq Acc Id: ENST00000609398
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl171,711,519 - 1,716,243 (-)Ensembl
RefSeq Acc Id: ENST00000609442
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl171,711,502 - 1,716,269 (-)Ensembl
RefSeq Acc Id: ENST00000609990
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl171,711,519 - 1,716,230 (-)Ensembl
RefSeq Acc Id: ENST00000610106
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl171,711,507 - 1,716,274 (-)Ensembl
RefSeq Acc Id: ENST00000685207
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl171,711,507 - 1,716,220 (-)Ensembl
RefSeq Acc Id: ENST00000686184
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl171,711,626 - 1,716,211 (-)Ensembl
RefSeq Acc Id: ENST00000686705
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl171,711,519 - 1,716,210 (-)Ensembl
RefSeq Acc Id: ENST00000688431
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl171,711,504 - 1,716,251 (-)Ensembl
RefSeq Acc Id: ENST00000689051
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl171,711,504 - 1,716,260 (-)Ensembl
RefSeq Acc Id: ENST00000689672
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl171,711,507 - 1,716,265 (-)Ensembl
RefSeq Acc Id: ENST00000690262
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl171,711,489 - 1,716,247 (-)Ensembl
RefSeq Acc Id: ENST00000691301
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl171,711,507 - 1,716,269 (-)Ensembl
RefSeq Acc Id: ENST00000691432
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl171,711,519 - 1,716,211 (-)Ensembl
RefSeq Acc Id: ENST00000691506
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl171,711,507 - 1,716,262 (-)Ensembl
RefSeq Acc Id: ENST00000691689
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl171,711,507 - 1,716,211 (-)Ensembl
RefSeq Acc Id: ENST00000701645
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl171,711,504 - 1,716,206 (-)Ensembl
RefSeq Acc Id: ENST00000702134
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl171,711,622 - 1,716,220 (-)Ensembl
RefSeq Acc Id: NR_028502
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38171,711,504 - 1,716,272 (-)NCBI
GRCh37171,614,798 - 1,619,566 (-)RGD
Celera171,630,502 - 1,635,274 (-)RGD
HuRef171,514,486 - 1,519,258 (-)RGD
CHM1_1171,624,565 - 1,629,337 (-)NCBI
T2T-CHM13v2.0171,600,429 - 1,605,201 (-)NCBI
Sequence:
RefSeq Acc Id: NR_028503
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38171,711,504 - 1,716,272 (-)NCBI
GRCh37171,614,798 - 1,619,566 (-)RGD
Celera171,630,502 - 1,635,274 (-)RGD
HuRef171,514,486 - 1,519,258 (-)RGD
CHM1_1171,624,565 - 1,629,337 (-)NCBI
T2T-CHM13v2.0171,600,429 - 1,605,201 (-)NCBI
Sequence:
RefSeq Acc Id: NR_028504
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38171,711,504 - 1,716,272 (-)NCBI
GRCh37171,614,798 - 1,619,566 (-)RGD
Celera171,630,502 - 1,635,274 (-)RGD
HuRef171,514,486 - 1,519,258 (-)RGD
CHM1_1171,624,565 - 1,629,337 (-)NCBI
T2T-CHM13v2.0171,600,429 - 1,605,201 (-)NCBI
Sequence:
RefSeq Acc Id: NR_028505
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38171,711,504 - 1,716,272 (-)NCBI
GRCh37171,614,798 - 1,619,566 (-)RGD
Celera171,630,502 - 1,635,274 (-)RGD
HuRef171,514,486 - 1,519,258 (-)RGD
CHM1_1171,624,565 - 1,629,337 (-)NCBI
T2T-CHM13v2.0171,600,429 - 1,605,201 (-)NCBI
Sequence:
Protein Sequences
GenBank Protein AAI19721 (Get FASTA)   NCBI Sequence Viewer  
  AAI19722 (Get FASTA)   NCBI Sequence Viewer  
  EAW90585 (Get FASTA)   NCBI Sequence Viewer  
  EAW90586 (Get FASTA)   NCBI Sequence Viewer  
  Q0VDD5 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q0VDD5-F1-model_v2 AlphaFold Q0VDD5 1-57 view protein structure

Promoters
RGD ID:6793831
Promoter ID:HG_KWN:24635
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   Jurkat,   K562,   Lymphoblastoid,   NB4
Transcripts:NM_001163673,   NM_152348,   NR_028502,   NR_028503,   NR_028504,   NR_028505,   OTTHUMT00000342470,   OTTHUMT00000342473,   OTTHUMT00000342474,   OTTHUMT00000342475
Position:
Human AssemblyChrPosition (strand)Source
Build 36171,565,401 - 1,567,212 (-)MPROMDB
RGD ID:15097022
Promoter ID:EPDNEWNC_H1863
Type:initiation region
Name:MIR22HG_2
Description:MIR22 host gene [Source:HGNC Symbol;Acc:HGNC:28219]
SO ACC ID:SO:0000170
Source:EPDNEWNC (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38171,716,211 - 1,716,271EPDNEWNC
RGD ID:15097023
Promoter ID:EPDNEWNC_H1864
Type:initiation region
Name:MIR22HG_1
Description:MIR22 host gene [Source:HGNC Symbol;Acc:HGNC:28219]
SO ACC ID:SO:0000170
Source:EPDNEWNC (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38171,717,146 - 1,717,206EPDNEWNC

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:28219 AgrOrtholog
COSMIC MIR22HG COSMIC
Ensembl Genes ENSG00000186594 Ensembl, ENTREZGENE
Ensembl Transcript ENST00000334146 ENTREZGENE
  ENST00000574306 ENTREZGENE
  ENST00000575626 ENTREZGENE
  ENST00000690262 ENTREZGENE
GTEx ENSG00000186594 GTEx
HGNC ID HGNC:28219 ENTREZGENE
Human Proteome Map MIR22HG Human Proteome Map
NCBI Gene 84981 ENTREZGENE
PharmGKB PA162378552 PharmGKB
RNAcentral URS00007599E7 RNACentral
  URS000075A858 RNACentral
  URS000075E845 RNACentral
  URS000075E9E4 RNACentral
UniProt CQ091_HUMAN UniProtKB/Swiss-Prot, ENTREZGENE
UniProt Secondary Q0VDD6 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-02-24 MIR22HG  MIR22 host gene    MIR22 host gene (non-protein coding)  Symbol and/or name change 5135510 APPROVED
2011-09-13 MIR22HG  MIR22 host gene (non-protein coding)  C17orf91  chromosome 17 open reading frame 91  Symbol and/or name change 5135510 APPROVED