MRPS36P2 (mitochondrial ribosomal protein S36 pseudogene 2) - Rat Genome Database

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Gene: MRPS36P2 (mitochondrial ribosomal protein S36 pseudogene 2) Homo sapiens
Analyze
Symbol: MRPS36P2
Name: mitochondrial ribosomal protein S36 pseudogene 2
RGD ID: 1605222
HGNC Page HGNC:29772
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Related Functional Gene: KGD4  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh384186,900,739 - 186,900,841 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl4186,900,540 - 186,900,838 (+)EnsemblGRCh38hg38GRCh38
GRCh374187,821,893 - 187,821,995 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 364188,058,887 - 188,058,989 (+)NCBINCBI36Build 36hg18NCBI36
Celera4185,141,959 - 185,142,061 (+)NCBICelera
Cytogenetic Map4q35.2NCBI
HuRef4183,569,069 - 183,569,171 (+)NCBIHuRef
CHM1_14187,798,345 - 187,798,447 (+)NCBICHM1_1
T2T-CHM13v2.04190,247,398 - 190,247,500 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:12706105   PMID:20339536  


Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:56
Count of miRNA genes:56
Interacting mature miRNAs:56
Transcripts:ENST00000512569
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium
Low 49 22 13 2 14 2 113 13 55 6 139 23 26 81
Below cutoff 270 262 104 27 56 12 677 174 229 33 291 153 18 231 452

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000512569
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl4186,900,540 - 186,900,838 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC MRPS36P2 COSMIC
Ensembl Genes ENSG00000249539 Ensembl
GTEx ENSG00000249539 GTEx
HGNC ID HGNC:29772 ENTREZGENE
Human Proteome Map MRPS36P2 Human Proteome Map
NCBI Gene 347706 ENTREZGENE
PharmGKB PA142671320 PharmGKB