LAYN (layilin) - Rat Genome Database

Name: LAYN
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: LAYN (layilin) Homo sapiens

Analyze

Symbol:

LAYN

Name:

layilin

RGD ID:

1604525

HGNC Page

HGNC:29471

Description:

Enables hyaluronic acid binding activity. Located in focal adhesion.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

FLJ30977; FLJ31092

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Mus musculus (house mouse):	Layn (layilin)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoMCL, Panther, Treefam
Rattus norvegicus (Norway rat):	Layn (layilin)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoMCL, Panther, Treefam
Chinchilla lanigera (long-tailed chinchilla):	Layn (layilin)	NCBI	Ortholog
Pan paniscus (bonobo/pygmy chimpanzee):	LAYN (layilin)	NCBI	Ortholog
Canis lupus familiaris (dog):	LAYN (layilin)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, Panther, Treefam
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Layn (layilin)	NCBI	Ortholog
Sus scrofa (pig):	LAYN (layilin)	HGNC	Ensembl, Inparanoid, NCBI, OMA, OrthoDB, Panther
Chlorocebus sabaeus (green monkey):	LAYN (layilin)	NCBI	Ortholog
Heterocephalus glaber (naked mole-rat):	Layn (layilin)	NCBI	Ortholog
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Layn (layilin)	Alliance	DIOPT (HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Layn (layilin)	Alliance	DIOPT (HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	laynb (layilin b)	Alliance	DIOPT (PANTHER\|ZFIN)
Danio rerio (zebrafish):	layna (layilin a)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoInspector\|PANTHER\|SonicParanoid\|ZFIN)
Xenopus tropicalis (tropical clawed frog):	rem1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	layn	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|SonicParanoid)

Allele / Splice:

See ClinVar data

Latest Assembly:

GRCh38 - Human Genome Assembly GRCh38

Position:

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	111,540,280 - 111,561,745 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	111,540,280 - 111,561,745 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	11	111,411,005 - 111,432,470 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	110,916,443 - 110,936,998 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	11	108,564,419 - 108,584,973 (+)	NCBI		Celera
Cytogenetic Map	11	q23.1	NCBI
HuRef	11	107,335,428 - 107,356,671 (+)	NCBI		HuRef
CHM1_1	11	111,294,325 - 111,315,557 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	11	111,550,425 - 111,571,891 (+)	NCBI		T2T-CHM13v2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

ataxia telangiectasia (IAGP)

BH4-deficient hyperphenylalaninemia A (IAGP)

Carney-Stratakis syndrome (IAGP)

Chromosome 11, Partial Trisomy 11q (IAGP)

intellectual disability (IAGP)

Pyruvate Dehydrogenase E2 Deficiency (IAGP)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

4,4'-sulfonyldiphenol (ISO)

acetamide (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (EXP)

arsenite(3-) (EXP)

benzo[a]pyrene (ISO)

benzo[b]fluoranthene (ISO)

bisphenol A (ISO)

bisphenol F (ISO)

butanal (EXP)

calcitriol (EXP)

CGP 52608 (EXP)

cisplatin (ISO)

dextran sulfate (ISO)

dorsomorphin (EXP)

entinostat (EXP)

gentamycin (ISO)

indole-3-methanol (ISO)

lead(0) (EXP)

mercury dibromide (EXP)

methylmercury chloride (EXP)

N-nitrosodiethylamine (ISO)

ozone (ISO)

p-chloromercuribenzoic acid (EXP)

panobinostat (EXP)

paracetamol (ISO)

pentanal (EXP)

perfluorohexanesulfonic acid (ISO)

phenylmercury acetate (EXP)

propanal (EXP)

SB 431542 (EXP)

silicon dioxide (EXP,ISO)

silver atom (EXP,ISO)

silver(0) (EXP,ISO)

succimer (ISO)

temozolomide (EXP)

tetrachloromethane (ISO)

thioacetamide (ISO)

trichloroethene (ISO)

trichostatin A (EXP)

valproic acid (EXP,ISO)

vorinostat (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

cell surface (ISS)

focal adhesion (HDA,ISS)

membrane (IEA)

ruffle (ISS)

Molecular Function

carbohydrate binding (IEA)

hyaluronic acid binding (IBA,IDA,IEA)

protein binding (IPI)

Phenotype Annotations Click to see Annotation Detail View

Human Phenotype

Intellectual disability (IAGP)

Pheochromocytoma (IAGP)

References

References - curated

#	Reference Title	Reference Citation
1.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:9786953	PMID:11294894	PMID:12477932	PMID:12975309	PMID:14702039	PMID:15489334	PMID:15913605	PMID:16344560	PMID:21423176	PMID:21873635	PMID:23048036	PMID:23251661
PMID:24706805	PMID:25150153	PMID:26410531	PMID:26598620	PMID:30761122	PMID:32296183	PMID:32393512	PMID:32539073	PMID:33676182	PMID:36398067	PMID:37335337	PMID:37642473

Genomics

Comparative Map Data

LAYN
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	111,540,280 - 111,561,745 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	111,540,280 - 111,561,745 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	11	111,411,005 - 111,432,470 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	110,916,443 - 110,936,998 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	11	108,564,419 - 108,584,973 (+)	NCBI		Celera
Cytogenetic Map	11	q23.1	NCBI
HuRef	11	107,335,428 - 107,356,671 (+)	NCBI		HuRef
CHM1_1	11	111,294,325 - 111,315,557 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	11	111,550,425 - 111,571,891 (+)	NCBI		T2T-CHM13v2.0

Layn
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	50,966,323 - 50,988,501 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	50,965,940 - 50,988,394 (-)	Ensembl		GRCm39 Ensembl
GRCm38	9	51,055,023 - 51,077,209 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	51,054,640 - 51,077,094 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	9	50,864,885 - 50,885,199 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	9	50,809,526 - 50,829,324 (-)	NCBI		MGSCv36	mm8
Celera	9	48,343,167 - 48,363,553 (-)	NCBI		Celera
Cytogenetic Map	9	A5.3	NCBI
cM Map	9	27.79	NCBI

Layn
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	60,261,325 - 60,280,797 (-)	NCBI		GRCr8
mRatBN7.2	8	51,363,928 - 51,384,748 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	51,367,091 - 51,384,330 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	8	56,914,525 - 56,931,848 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	55,193,448 - 55,210,773 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	53,057,712 - 53,075,039 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	55,447,203 - 55,469,420 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	55,447,709 - 55,467,688 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	8	54,044,547 - 54,064,579 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	8	54,379,434 - 54,396,580 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	8	50,913,524 - 50,930,695 (-)	NCBI		Celera
Cytogenetic Map	8	q23	NCBI

Layn
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955412	13,280,327 - 13,297,833 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955412	13,282,871 - 13,298,214 (+)	NCBI	ChiLan1.0	ChiLan1.0

LAYN
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	112,286,747 - 112,321,858 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	113,378,821 - 113,413,901 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	106,423,134 - 106,443,237 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	110,267,428 - 110,287,937 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	110,267,762 - 110,287,935 (+)	Ensembl	panpan1.1		panPan2

LAYN
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	21,509,143 - 21,531,390 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	21,512,026 - 21,531,641 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	21,431,419 - 21,452,906 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	21,535,081 - 21,556,912 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	21,535,007 - 21,556,895 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	21,596,321 - 21,618,027 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	21,496,724 - 21,518,168 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	21,544,917 - 21,566,929 (-)	NCBI		UU_Cfam_GSD_1.0

Layn
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	93,831,104 - 93,857,972 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936612	2,853,633 - 2,872,948 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936612	2,853,354 - 2,872,861 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

LAYN
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	39,306,300 - 39,327,072 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	9	39,306,276 - 39,326,825 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	44,120,371 - 44,141,679 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

LAYN
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	102,878,396 - 102,900,814 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	102,879,428 - 102,899,743 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666043	23,074,627 - 23,095,688 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Layn
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624784	6,642,728 - 6,662,957 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624784	6,642,580 - 6,661,043 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in LAYN
23 total Variants

Clinical Variants

Name	Type	Condition(s)	Position(s)	Clinical significance
GRCh38/hg38 11q22.1-25(chr11:100348599-135040246)x3	copy number gain	See cases [RCV000053638]	Chr11:100348599..135040246 [GRCh38] Chr11:100219331..134910140 [GRCh37] Chr11:99724541..134415350 [NCBI36] Chr11:11q22.1-25	pathogenic
Single allele	deletion	Intellectual disability [RCV001293382]	Chr11:118359328..118372573 [GRCh37] Chr11:11p15.3-q23.3	pathogenic
GRCh37/hg19 11p15.5-q25(chr11:230616-134938470)	copy number gain	See cases [RCV000511729]	Chr11:230616..134938470 [GRCh37] Chr11:11p15.5-q25	pathogenic
GRCh37/hg19 11p15.5-q25(chr11:230616-134938470)x3	copy number gain	See cases [RCV000510881]	Chr11:230616..134938470 [GRCh37] Chr11:11p15.5-q25	pathogenic
NM_178834.5(LAYN):c.473C>T (p.Pro158Leu)	single nucleotide variant	not specified [RCV004286178]	Chr11:111549707 [GRCh38] Chr11:111420432 [GRCh37] Chr11:11q23.1	uncertain significance
NM_178834.5(LAYN):c.433A>T (p.Met145Leu)	single nucleotide variant	not specified [RCV004323666]	Chr11:111549667 [GRCh38] Chr11:111420392 [GRCh37] Chr11:11q23.1	uncertain significance
GRCh37/hg19 11q13.4-23.3(chr11:71588805-116680918)x3	copy number gain	not provided [RCV000683374]	Chr11:71588805..116680918 [GRCh37] Chr11:11q13.4-23.3	pathogenic
GRCh37/hg19 11p15.5-q25(chr11:198510-134934063)x3	copy number gain	not provided [RCV000737348]	Chr11:198510..134934063 [GRCh37] Chr11:11p15.5-q25	pathogenic
GRCh37/hg19 11q14.1-23.2(chr11:80053454-113316236)x1	copy number loss	not provided [RCV000737595]	Chr11:80053454..113316236 [GRCh37] Chr11:11q14.1-23.2	pathogenic
GRCh37/hg19 11p15.5-q25(chr11:70864-134938470)x3	copy number gain	not provided [RCV000749874]	Chr11:70864..134938470 [GRCh37] Chr11:11p15.5-q25	pathogenic
NM_178834.5(LAYN):c.130G>A (p.Val44Ile)	single nucleotide variant	not specified [RCV004314623]	Chr11:111543967 [GRCh38] Chr11:111414692 [GRCh37] Chr11:11q23.1	uncertain significance
NM_178834.5(LAYN):c.992C>T (p.Ser331Leu)	single nucleotide variant	not provided [RCV000883342]	Chr11:111560325 [GRCh38] Chr11:111431050 [GRCh37] Chr11:11q23.1	benign
NM_178834.5(LAYN):c.40G>A (p.Val14Met)	single nucleotide variant	not provided [RCV000947385]	Chr11:111540883 [GRCh38] Chr11:111411608 [GRCh37] Chr11:11q23.1	benign
GRCh37/hg19 11q22.3-23.3(chr11:104101411-116680918)x1	copy number loss	not provided [RCV000848741]	Chr11:104101411..116680918 [GRCh37] Chr11:11q22.3-23.3	pathogenic
GRCh37/hg19 11q23.1-23.3(chr11:110969076-114578509)x1	copy number loss	not provided [RCV000848936]	Chr11:110969076..114578509 [GRCh37] Chr11:11q23.1-23.3	uncertain significance
NM_178834.5(LAYN):c.172G>A (p.Glu58Lys)	single nucleotide variant	not provided [RCV000957002]	Chr11:111544009 [GRCh38] Chr11:111414734 [GRCh37] Chr11:11q23.1	benign
GRCh37/hg19 11q22.3-23.3(chr11:105699599-114524876)x1	copy number loss	not provided [RCV001006445]	Chr11:105699599..114524876 [GRCh37] Chr11:11q22.3-23.3	pathogenic
GRCh37/hg19 11q22.3-23.2(chr11:103320065-114349787)x1	copy number loss	not provided [RCV001006439]	Chr11:103320065..114349787 [GRCh37] Chr11:11q22.3-23.2	pathogenic
NC_000011.9:g.(?_111171709)_(111965694_?)del	deletion	Carney-Stratakis syndrome [RCV001032115]	Chr11:111171709..111965694 [GRCh37] Chr11:11q23.1	pathogenic
NC_000011.9:g.(?_111171709)_(111965694_?)dup	duplication	Carney-Stratakis syndrome [RCV001300223]	Chr11:111171709..111965694 [GRCh37] Chr11:11q23.1	uncertain significance
NC_000011.9:g.(?_94153285)_(111965700_?)del	deletion	Ataxia-telangiectasia syndrome [RCV001389105]	Chr11:94153285..111965700 [GRCh37] Chr11:11q21-23.1	pathogenic
NC_000011.9:g.104288964_134937416dup	duplication	Distal trisomy 11q [RCV001250234]	Chr11:104288964..134937416 [GRCh37] Chr11:11q22.3-25	pathogenic
GRCh37/hg19 11q14.1-23.3(chr11:85422071-118022671)x1	copy number loss	not provided [RCV001832892]	Chr11:85422071..118022671 [GRCh37] Chr11:11q14.1-23.3	uncertain significance
NM_178834.5(LAYN):c.85+631C>T	single nucleotide variant	not provided [RCV002132022]	Chr11:111541559 [GRCh38] Chr11:111412284 [GRCh37] Chr11:11q23.1	benign
NC_000011.9:g.(?_111171709)_(112104278_?)dup	duplication	6-Pyruvoyl-tetrahydrobiopterin synthase deficiency [RCV003111003]\|Pyruvate dehydrogenase E2 deficiency [RCV003111004]	Chr11:111171709..112104278 [GRCh37] Chr11:11q23.1	uncertain significance
NC_000011.9:g.(?_111171709)_(111959745_?)del	deletion	Carney-Stratakis syndrome [RCV003113183]	Chr11:111171709..111959745 [GRCh37] Chr11:11q23.1	pathogenic
NC_000011.9:g.(?_111171709)_(111958707_?)del	deletion	Carney-Stratakis syndrome [RCV003113185]	Chr11:111171709..111958707 [GRCh37] Chr11:11q23.1	pathogenic
NM_178834.5(LAYN):c.500G>A (p.Arg167Gln)	single nucleotide variant	not specified [RCV004263183]	Chr11:111549734 [GRCh38] Chr11:111420459 [GRCh37] Chr11:11q23.1	uncertain significance
GRCh37/hg19 11p13-q25(chr11:32799481-134938470)x3	copy number gain	MISSED ABORTION [RCV002282973]	Chr11:32799481..134938470 [GRCh37] Chr11:11p13-q25	pathogenic
NM_178834.5(LAYN):c.593C>A (p.Thr198Lys)	single nucleotide variant	not specified [RCV004307981]	Chr11:111555225 [GRCh38] Chr11:111425950 [GRCh37] Chr11:11q23.1	uncertain significance
GRCh37/hg19 11q22.3-23.3(chr11:109328787-116414966)x1	copy number loss	not provided [RCV002474547]	Chr11:109328787..116414966 [GRCh37] Chr11:11q22.3-23.3	pathogenic
NM_178834.5(LAYN):c.631G>A (p.Ala211Thr)	single nucleotide variant	not specified [RCV004090047]	Chr11:111555263 [GRCh38] Chr11:111425988 [GRCh37] Chr11:11q23.1	uncertain significance
NM_178834.5(LAYN):c.308G>A (p.Arg103His)	single nucleotide variant	not specified [RCV004200455]	Chr11:111544145 [GRCh38] Chr11:111414870 [GRCh37] Chr11:11q23.1	uncertain significance
NM_178834.5(LAYN):c.35T>G (p.Leu12Arg)	single nucleotide variant	not specified [RCV004132815]	Chr11:111540878 [GRCh38] Chr11:111411603 [GRCh37] Chr11:11q23.1	uncertain significance
NM_178834.5(LAYN):c.856G>A (p.Val286Ile)	single nucleotide variant	not specified [RCV004118022]	Chr11:111560189 [GRCh38] Chr11:111430914 [GRCh37] Chr11:11q23.1	uncertain significance
NM_178834.5(LAYN):c.721G>A (p.Val241Ile)	single nucleotide variant	not specified [RCV004202815]	Chr11:111557603 [GRCh38] Chr11:111428328 [GRCh37] Chr11:11q23.1	uncertain significance
NM_178834.5(LAYN):c.803C>G (p.Thr268Ser)	single nucleotide variant	not specified [RCV004122532]	Chr11:111560136 [GRCh38] Chr11:111430861 [GRCh37] Chr11:11q23.1	uncertain significance
NM_178834.5(LAYN):c.167T>G (p.Phe56Cys)	single nucleotide variant	not specified [RCV004093818]	Chr11:111544004 [GRCh38] Chr11:111414729 [GRCh37] Chr11:11q23.1	uncertain significance
NM_178834.5(LAYN):c.1021G>A (p.Val341Met)	single nucleotide variant	not specified [RCV004233164]	Chr11:111560354 [GRCh38] Chr11:111431079 [GRCh37] Chr11:11q23.1	likely benign
NM_178834.5(LAYN):c.781C>T (p.Pro261Ser)	single nucleotide variant	not specified [RCV004201299]	Chr11:111560114 [GRCh38] Chr11:111430839 [GRCh37] Chr11:11q23.1	uncertain significance
NM_178834.5(LAYN):c.766C>T (p.Arg256Trp)	single nucleotide variant	not specified [RCV004079001]	Chr11:111560099 [GRCh38] Chr11:111430824 [GRCh37] Chr11:11q23.1	uncertain significance
NM_178834.5(LAYN):c.998G>A (p.Ser333Asn)	single nucleotide variant	not specified [RCV004280622]	Chr11:111560331 [GRCh38] Chr11:111431056 [GRCh37] Chr11:11q23.1	uncertain significance
NM_178834.5(LAYN):c.895C>T (p.Arg299Trp)	single nucleotide variant	not specified [RCV004347660]	Chr11:111560228 [GRCh38] Chr11:111430953 [GRCh37] Chr11:11q23.1	uncertain significance
NM_178834.5(LAYN):c.893C>T (p.Thr298Ile)	single nucleotide variant	not specified [RCV004363050]	Chr11:111560226 [GRCh38] Chr11:111430951 [GRCh37] Chr11:11q23.1	uncertain significance
Single allele	duplication	not provided [RCV003448710]	Chr11:102134973..134945611 [GRCh37] Chr11:11q22.2-25	pathogenic
NM_178834.5(LAYN):c.1085A>G (p.Lys362Arg)	single nucleotide variant	not specified [RCV004410284]	Chr11:111560418 [GRCh38] Chr11:111431143 [GRCh37] Chr11:11q23.1	uncertain significance
NM_178834.5(LAYN):c.307C>T (p.Arg103Cys)	single nucleotide variant	not specified [RCV004410285]	Chr11:111544144 [GRCh38] Chr11:111414869 [GRCh37] Chr11:11q23.1	uncertain significance
NM_178834.5(LAYN):c.463A>G (p.Ile155Val)	single nucleotide variant	not specified [RCV004410286]	Chr11:111549697 [GRCh38] Chr11:111420422 [GRCh37] Chr11:11q23.1	uncertain significance
NM_178834.5(LAYN):c.59G>A (p.Arg20Gln)	single nucleotide variant	not specified [RCV004410288]	Chr11:111540902 [GRCh38] Chr11:111411627 [GRCh37] Chr11:11q23.1	uncertain significance
NM_178834.5(LAYN):c.805A>G (p.Ile269Val)	single nucleotide variant	not specified [RCV004410289]	Chr11:111560138 [GRCh38] Chr11:111430863 [GRCh37] Chr11:11q23.1	uncertain significance

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	2597
Count of miRNA genes:	714
Interacting mature miRNAs:	801
Transcripts:	ENST00000375614, ENST00000375615, ENST00000436913, ENST00000525126, ENST00000525866, ENST00000528102, ENST00000528924, ENST00000530962, ENST00000533265, ENST00000533999
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system

circulatory system

endocrine system

exocrine system

hemolymphoid system

hepatobiliary system

integumental system

musculoskeletal system

nervous system

renal system

reproductive system

respiratory system

sensory system

visual system

adipose tissue

appendage

entire extraembryonic component

pharyngeal arch

High

Medium

1031

1091

721

127

921

320

699

105

855

1217

305

821

Low

1301

1355

756

374

766

214

3328

1811

3030

287

561

322

161

899

1910

Below cutoff

514

246

233

771

235

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001258390	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001258391	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001318799	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_178834	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006718769	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006718770	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_054367767	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AK055539	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK055654	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK293317	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK296231	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK298165	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AP002008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY358554	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC025407	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH471065	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CP068267	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DA608521	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DB006476	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DC398135	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENST00000375614 ⟹ ENSP00000364764

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	11	111,540,720 - 111,561,745 (+)	Ensembl

RefSeq Acc Id:

ENST00000375615 ⟹ ENSP00000364765

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	11	111,540,659 - 111,560,960 (+)	Ensembl

RefSeq Acc Id:

ENST00000436913 ⟹ ENSP00000392942

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	11	111,540,508 - 111,561,745 (+)	Ensembl

RefSeq Acc Id:

ENST00000525126 ⟹ ENSP00000434328

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	11	111,540,709 - 111,560,933 (+)	Ensembl

RefSeq Acc Id:

ENST00000525866 ⟹ ENSP00000434300

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	11	111,540,720 - 111,561,539 (+)	Ensembl

RefSeq Acc Id:

ENST00000528102

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	11	111,541,552 - 111,551,416 (+)	Ensembl

RefSeq Acc Id:

ENST00000528924 ⟹ ENSP00000486561

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	11	111,541,440 - 111,557,643 (+)	Ensembl

RefSeq Acc Id:

ENST00000530962 ⟹ ENSP00000431627

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	11	111,541,333 - 111,557,641 (+)	Ensembl

RefSeq Acc Id:

ENST00000533265 ⟹ ENSP00000434972

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	11	111,540,730 - 111,560,918 (+)	Ensembl

RefSeq Acc Id:

ENST00000533999 ⟹ ENSP00000432434

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	11	111,540,280 - 111,555,212 (+)	Ensembl

RefSeq Acc Id:

NM_001258390 ⟹ NP_001245319

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	11	111,540,720 - 111,561,745 (+)	NCBI
HuRef	11	107,335,428 - 107,356,671 (+)	NCBI
CHM1_1	11	111,294,325 - 111,315,557 (+)	NCBI
T2T-CHM13v2.0	11	111,550,865 - 111,571,891 (+)	NCBI

Sequence:

show sequence

GTGCGGTCCGTCGGTGGCCTAGAGATGCTGCTGCCGCGGTTGCAGTTGTCGCGCACGCCTCTGC
CCGCCAGCCCGCTCCACCGCCGTAGCGCCCGAGTGTCGGGGGGCGCACCCGAGTCGGGCCATGA
GGCCGGGAACCGCGCTACAGGCCGTGCTGCTGGCCGTGCTGCTGGTGGGGCTGCGGGCCGCGAC
GGGTCGCCTGCTGAGTGCCTCGGATTTGGACCTCAGAGGAGGGCAGCCAGTCTGCCGGGGAGGG
ACACAGAGGCCTTGTTATAAAGTCATTTACTTCCATGATACTTCTCGAAGACTGAACTTTGAGG
AAGCCAAAGAAGCCTGCAGGAGGGATGGAGGCCAGCTAGTCAGCATCGAGTCTGAAGATGAACA
GAAACTGATAGAAAAGTTCATTGAAAACCTCTTGCCATCTGATGGTGACTTCTGGATTGGGCTC
AGGAGGCGTGAGGAGAAACAAAGCAATAGCACAGCCTGCCAGGACCTTTATGCTTGGACTGATG
GCAGCATATCACAATTTAGGAACTGGTATGTGGATGAGCCATCCTGCGGCAGCGAGGTCTGCGT
GGTCATGTACCATCAGCCATCGGCACCCGCTGGCATCGGAGGCCCCTACATGTTCCAGTGGAAT
GATGACCGGTGCAACATGAAGAACAATTTCATTTGCAAATATTCTGATGAGAAACCAGCAGTTC
CTTCTAGAGAAGCTGAAGGTGAGGAAACAGAGCTGACAACACCTGTACTTCCAGAAGAAACACA
GGAAGAAGATGCCAAAAAAACATTTAAAGAAAGTAGAGAAGCTGCCTTGAATCTGGCCTACATC
CTAATCCCCAGCATTCCCCTTCTCCTCCTCCTTGTGGTCACCACAGTTGTATGTTGGGTTTGGA
TCTGTAGAAAAAGAAAACGGGAGCAGCCAGACCCTAGCACAAAGAAGCAACACACCATCTGGCC
CTCTCCTCACCAGGGAAACAGCCCGGACCTAGAGGTCTACAATGTCATAAGAAAACAAAGCGAA
GCTGACTTAGCTGAGACCCGGCCAGACCTGAAGAATATTTCATTCCGAGTGTGTTCGGGAGAAG
CCACTCCCGATGACATGTCTTGTGACTATGACAACATGGCTGTGAACCCATCAGAAAGTGGGTT
TGTGACTCTGGTGAGCGTGGAGAGTGGATTTGTGACCAATGACATTTATGAGTTCTCCCCAGAC
CAAATGGGGAGGAGTAAGGAGTCTGGATGGGTGGAAAATGAAATATATGGTTATTAGGACATAT
AAAAAACTGAAACTGACAACAATGGAAAAGAAATGATAAGCAAAATCCTCTTATTTTCTATAAG
GAAAATACACAGAAGGTCTATGAACAAGCTTAGATCAGGTCCTGTGGATGAGCATGTGGTCCCC
ACGACCTCCTGTTGGACCCCCACGTTTTGGCTGTATCCTTTATCCCAGCCAGTCATCCAGCTCG
ACCTTATGAGAAGGTACCTTGCCCAGGTCTGGCACATAGTAGAGTCTCAATAAATGTCACTTGG
TTGGTTGTATCTAACTTTTAAGGGACAGAGCTTTACCTGGCAGTGATAAAGATGGGCTGTGGAG
CTTGGAAAACCACCTCTGTTTTCCTTGCTCTATACAGCAGCACATATTATCATACAGACAGAAA
ATCCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTGTGCATCGGCAATTCTCA
TATCTGTTTTTTTCAAAGAATAATAAAATCAAATAAAGAGCAGGAAACAGAGTGTTAGTCTGTG
TCTACAGCCCTTCCTCTGCATGTGGCCACAGGGGACCTTTTTTTGTTTCTCCTGACATCCAGAC
TTGGAAATATCTAACTACTTGCAAAACTAAAAATGAGGCCAGGCGCAGTGGCTGACGCCTGTAA
TCCCAGAACCTTGGGAGACCAAGATTGGAGGATAGCTTGAGTTCAGGAGTTCCAGACCTTCCTG
GGCAAAATAGTGAGACTCTGACTCTACAAAAAATTTAAAAATTAGCAGGGCATGGTGGCATGCG
CCTGCAGTCCCAGCTACTCAGGAGGCCGAGGTGGGGGAATTGCTTGAGCCCAGGAGGTTGAGGC
TGCAGTGAGCTAGGATCACGCCACTGCTCTCCTGCGTGGGCAACAGAATGAGACCCTGTCTCTA
AACAAAAATATTTTTTAAAGAAACTAAAAATGAAATTTGAGTCTCAGCTTCTAGGCTTATGTAC
TCCCATCCCTGATACTACACGTTGTTCTGTTTGCATGTTTGTTACTGCAGCATCAACATAACAT
GACTAATAATGATGACAGTTCTACCTTTTGTTGACAGACCTCATTGTTTCAATTGTGTTTGGCC
TCAAATTCAGAGAAAAGTTTCTCAGCCCAGCATCAATCATATACACATTGGAGGTCTGAAAGCC
ATTATTTAAATCACCAGCAATTTCCCTCAATCAGCTTCATAATCTCATATTTTAACCTTTCCTC
ATATGTCTTATTTTTTAATAGCTCAGCAACTTTGCTTCACATATGGAGCCCCAACCTCTAGAGT

hide sequence

RefSeq Acc Id:

NM_001258391 ⟹ NP_001245320

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	11	111,540,720 - 111,561,745 (+)	NCBI
GRCh37	11	111,411,233 - 111,432,470 (+)	NCBI
HuRef	11	107,335,428 - 107,356,671 (+)	NCBI
CHM1_1	11	111,294,325 - 111,315,557 (+)	NCBI
T2T-CHM13v2.0	11	111,550,865 - 111,571,891 (+)	NCBI

Sequence:

show sequence

GTGCGGTCCGTCGGTGGCCTAGAGATGCTGCTGCCGCGGTTGCAGTTGTCGCGCACGCCTCTGC
CCGCCAGCCCGCTCCACCGCCGTAGCGCCCGAGTGTCGGGGGGCGCACCCGAGTCGGGCCATGA
GGCCGGGAACCGCGCTACAGGCCGTGCTGCTGGCCGTGCTGCTGGTGGGGCTGCGGGCCGCGAC
GGGTCGCCTGCTGAGTGGGCAGCCAGTCTGCCGGGGAGGGACACAGAGGCCTTGTTATAAAGTC
ATTTACTTCCATGATACTTCTCGAAGACTGAACTTTGAGGAAGCCAAAGAAGCCTGCAGGAGGG
ATGGAGGCCAGCTAGTCAGCATCGAGTCTGAAGATGAACAGAAACTGATAGAAAAGTTCATTGA
AAACCTCTTGCCATCTGATGGTGACTTCTGGATTGGGCTCAGGAGGCGTGAGGAGAAACAAAGC
AATAGCACAGCCTGCCAGGACCTTTATGCTTGGACTGATGGCAGCATATCACAATTTAGAGAAA
CCAGCAGTTCCTTCTAGAGAAGCTGAAGGTGAGGAAACAGAGCTGACAACACCTGTACTTCCAG
AAGAAACACAGGAAGAAGATGCCAAAAAAACATTTAAAGAAAGTAGAGAAGCTGCCTTGAATCT
GGCCTACATCCTAATCCCCAGCATTCCCCTTCTCCTCCTCCTTGTGGTCACCACAGTTGTATGT
TGGGTTTGGATCTGTAGAAAAAGAAAACGGGAGCAGCCAGACCCTAGCACAAAGAAGCAACACA
CCATCTGGCCCTCTCCTCACCAGGGAAACAGCCCGGACCTAGAGGTCTACAATGTCATAAGAAA
ACAAAGCGAAGCTGACTTAGCTGAGACCCGGCCAGACCTGAAGAATATTTCATTCCGAGTGTGT
TCGGGAGAAGCCACTCCCGATGACATGTCTTGTGACTATGACAACATGGCTGTGAACCCATCAG
AAAGTGGGTTTGTGACTCTGGTGAGCGTGGAGAGTGGATTTGTGACCAATGACATTTATGAGTT
CTCCCCAGACCAAATGGGGAGGAGTAAGGAGTCTGGATGGGTGGAAAATGAAATATATGGTTAT
TAGGACATATAAAAAACTGAAACTGACAACAATGGAAAAGAAATGATAAGCAAAATCCTCTTAT
TTTCTATAAGGAAAATACACAGAAGGTCTATGAACAAGCTTAGATCAGGTCCTGTGGATGAGCA
TGTGGTCCCCACGACCTCCTGTTGGACCCCCACGTTTTGGCTGTATCCTTTATCCCAGCCAGTC
ATCCAGCTCGACCTTATGAGAAGGTACCTTGCCCAGGTCTGGCACATAGTAGAGTCTCAATAAA
TGTCACTTGGTTGGTTGTATCTAACTTTTAAGGGACAGAGCTTTACCTGGCAGTGATAAAGATG
GGCTGTGGAGCTTGGAAAACCACCTCTGTTTTCCTTGCTCTATACAGCAGCACATATTATCATA
CAGACAGAAAATCCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTGTGCATCG
GCAATTCTCATATCTGTTTTTTTCAAAGAATAATAAAATCAAATAAAGAGCAGGAAACAGAGTG
TTAGTCTGTGTCTACAGCCCTTCCTCTGCATGTGGCCACAGGGGACCTTTTTTTGTTTCTCCTG
ACATCCAGACTTGGAAATATCTAACTACTTGCAAAACTAAAAATGAGGCCAGGCGCAGTGGCTG
ACGCCTGTAATCCCAGAACCTTGGGAGACCAAGATTGGAGGATAGCTTGAGTTCAGGAGTTCCA
GACCTTCCTGGGCAAAATAGTGAGACTCTGACTCTACAAAAAATTTAAAAATTAGCAGGGCATG
GTGGCATGCGCCTGCAGTCCCAGCTACTCAGGAGGCCGAGGTGGGGGAATTGCTTGAGCCCAGG
AGGTTGAGGCTGCAGTGAGCTAGGATCACGCCACTGCTCTCCTGCGTGGGCAACAGAATGAGAC
CCTGTCTCTAAACAAAAATATTTTTTAAAGAAACTAAAAATGAAATTTGAGTCTCAGCTTCTAG
GCTTATGTACTCCCATCCCTGATACTACACGTTGTTCTGTTTGCATGTTTGTTACTGCAGCATC
AACATAACATGACTAATAATGATGACAGTTCTACCTTTTGTTGACAGACCTCATTGTTTCAATT
GTGTTTGGCCTCAAATTCAGAGAAAAGTTTCTCAGCCCAGCATCAATCATATACACATTGGAGG
TCTGAAAGCCATTATTTAAATCACCAGCAATTTCCCTCAATCAGCTTCATAATCTCATATTTTA
ACCTTTCCTCATATGTCTTATTTTTTAATAGCTCAGCAACTTTGCTTCACATATGGAGCCCCAA
CCTCTAGAGT

hide sequence

RefSeq Acc Id:

NM_001318799 ⟹ NP_001305728

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	11	111,540,280 - 111,561,745 (+)	NCBI
CHM1_1	11	111,294,097 - 111,315,557 (+)	NCBI
T2T-CHM13v2.0	11	111,550,425 - 111,571,891 (+)	NCBI

Sequence:

show sequence

ATTCCCTGCTCAGGCGTCGCCCTTCGTGCTGGGACTGCGGCCTGCTGAGCCCCAGGGCAGCCAG
TCTGCCGGGGAGGGACACAGAGGCCTTGTTATAAAGTCATTTACTTCCATGATACTTCTCGAAG
ACTGAACTTTGAGGAAGCCAAAGAAGCCTGCAGGAGGGATGGAGGCCAGCTAGTCAGCATCGAG
TCTGAAGATGAACAGAAACTGATAGAAAAGTTCATTGAAAACCTCTTGCCATCTGATGGTGACT
TCTGGATTGGGCTCAGGAGGCGTGAGGAGAAACAAAGCAATAGCACAGCCTGCCAGGACCTTTA
TGCTTGGACTGATGGCAGCATATCACAATTTAGGAACTGGTATGTGGATGAGCCATCCTGCGGC
AGCGAGGTCTGCGTGGTCATGTACCATCAGCCATCGGCACCCGCTGGCATCGGAGGCCCCTACA
TGTTCCAGTGGAATGATGACCGGTGCAACATGAAGAACAATTTCATTTGCAAATATTCTGATGA
GAAACCAGCAGTTCCTTCTAGAGAAGCTGAAGGTGAGGAAACAGAGCTGACAACACCTGTACTT
CCAGAAGAAACACAGGAAGAAGATGCCAAAAAAACATTTAAAGAAAGTAGAGAAGCTGCCTTGA
ATCTGGCCTACATCCTAATCCCCAGCATTCCCCTTCTCCTCCTCCTTGTGGTCACCACAGTTGT
ATGTTGGGTTTGGATCTGTAGAAAAAGAAAACGGGAGCAGCCAGACCCTAGCACAAAGAAGCAA
CACACCATCTGGCCCTCTCCTCACCAGGGAAACAGCCCGGACCTAGAGGTCTACAATGTCATAA
GAAAACAAAGCGAAGCTGACTTAGCTGAGACCCGGCCAGACCTGAAGAATATTTCATTCCGAGT
GTGTTCGGGAGAAGCCACTCCCGATGACATGTCTTGTGACTATGACAACATGGCTGTGAACCCA
TCAGAAAGTGGGTTTGTGACTCTGGTGAGCGTGGAGAGTGGATTTGTGACCAATGACATTTATG
AGTTCTCCCCAGACCAAATGGGGAGGAGTAAGGAGTCTGGATGGGTGGAAAATGAAATATATGG
TTATTAGGACATATAAAAAACTGAAACTGACAACAATGGAAAAGAAATGATAAGCAAAATCCTC
TTATTTTCTATAAGGAAAATACACAGAAGGTCTATGAACAAGCTTAGATCAGGTCCTGTGGATG
AGCATGTGGTCCCCACGACCTCCTGTTGGACCCCCACGTTTTGGCTGTATCCTTTATCCCAGCC
AGTCATCCAGCTCGACCTTATGAGAAGGTACCTTGCCCAGGTCTGGCACATAGTAGAGTCTCAA
TAAATGTCACTTGGTTGGTTGTATCTAACTTTTAAGGGACAGAGCTTTACCTGGCAGTGATAAA
GATGGGCTGTGGAGCTTGGAAAACCACCTCTGTTTTCCTTGCTCTATACAGCAGCACATATTAT
CATACAGACAGAAAATCCAGAATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTGTGC
ATCGGCAATTCTCATATCTGTTTTTTTCAAAGAATAATAAAATCAAATAAAGAGCAGGAAACAG
AGTGTTAGTCTGTGTCTACAGCCCTTCCTCTGCATGTGGCCACAGGGGACCTTTTTTTGTTTCT
CCTGACATCCAGACTTGGAAATATCTAACTACTTGCAAAACTAAAAATGAGGCCAGGCGCAGTG
GCTGACGCCTGTAATCCCAGAACCTTGGGAGACCAAGATTGGAGGATAGCTTGAGTTCAGGAGT
TCCAGACCTTCCTGGGCAAAATAGTGAGACTCTGACTCTACAAAAAATTTAAAAATTAGCAGGG
CATGGTGGCATGCGCCTGCAGTCCCAGCTACTCAGGAGGCCGAGGTGGGGGAATTGCTTGAGCC
CAGGAGGTTGAGGCTGCAGTGAGCTAGGATCACGCCACTGCTCTCCTGCGTGGGCAACAGAATG
AGACCCTGTCTCTAAACAAAAATATTTTTTAAAGAAACTAAAAATGAAATTTGAGTCTCAGCTT
CTAGGCTTATGTACTCCCATCCCTGATACTACACGTTGTTCTGTTTGCATGTTTGTTACTGCAG
CATCAACATAACATGACTAATAATGATGACAGTTCTACCTTTTGTTGACAGACCTCATTGTTTC
AATTGTGTTTGGCCTCAAATTCAGAGAAAAGTTTCTCAGCCCAGCATCAATCATATACACATTG
GAGGTCTGAAAGCCATTATTTAAATCACCAGCAATTTCCCTCAATCAGCTTCATAATCTCATAT
TTTAACCTTTCCTCATATGTCTTATTTTTTAATAGCTCAGCAACTTTGCTTCACATATGGAGCC
CCAACCTCTAGAGT

hide sequence

RefSeq Acc Id:

NM_178834 ⟹ NP_849156

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	11	111,540,720 - 111,561,745 (+)	NCBI
GRCh37	11	111,411,233 - 111,432,470 (+)	NCBI
Build 36	11	110,916,443 - 110,936,998 (+)	NCBI Archive
Celera	11	108,564,419 - 108,584,973 (+)	RGD
HuRef	11	107,335,428 - 107,356,671 (+)	NCBI
CHM1_1	11	111,294,325 - 111,315,557 (+)	NCBI
T2T-CHM13v2.0	11	111,550,865 - 111,571,891 (+)	NCBI

Sequence:

show sequence

GTGCGGTCCGTCGGTGGCCTAGAGATGCTGCTGCCGCGGTTGCAGTTGTCGCGCACGCCTCTGC
CCGCCAGCCCGCTCCACCGCCGTAGCGCCCGAGTGTCGGGGGGCGCACCCGAGTCGGGCCATGA
GGCCGGGAACCGCGCTACAGGCCGTGCTGCTGGCCGTGCTGCTGGTGGGGCTGCGGGCCGCGAC
GGGTCGCCTGCTGAGTGGGCAGCCAGTCTGCCGGGGAGGGACACAGAGGCCTTGTTATAAAGTC
ATTTACTTCCATGATACTTCTCGAAGACTGAACTTTGAGGAAGCCAAAGAAGCCTGCAGGAGGG
ATGGAGGCCAGCTAGTCAGCATCGAGTCTGAAGATGAACAGAAACTGATAGAAAAGTTCATTGA
AAACCTCTTGCCATCTGATGGTGACTTCTGGATTGGGCTCAGGAGGCGTGAGGAGAAACAAAGC
AATAGCACAGCCTGCCAGGACCTTTATGCTTGGACTGATGGCAGCATATCACAATTTAGGAACT
GGTATGTGGATGAGCCATCCTGCGGCAGCGAGGTCTGCGTGGTCATGTACCATCAGCCATCGGC
ACCCGCTGGCATCGGAGGCCCCTACATGTTCCAGTGGAATGATGACCGGTGCAACATGAAGAAC
AATTTCATTTGCAAATATTCTGATGAGAAACCAGCAGTTCCTTCTAGAGAAGCTGAAGGTGAGG
AAACAGAGCTGACAACACCTGTACTTCCAGAAGAAACACAGGAAGAAGATGCCAAAAAAACATT
TAAAGAAAGTAGAGAAGCTGCCTTGAATCTGGCCTACATCCTAATCCCCAGCATTCCCCTTCTC
CTCCTCCTTGTGGTCACCACAGTTGTATGTTGGGTTTGGATCTGTAGAAAAAGAAAACGGGAGC
AGCCAGACCCTAGCACAAAGAAGCAACACACCATCTGGCCCTCTCCTCACCAGGGAAACAGCCC
GGACCTAGAGGTCTACAATGTCATAAGAAAACAAAGCGAAGCTGACTTAGCTGAGACCCGGCCA
GACCTGAAGAATATTTCATTCCGAGTGTGTTCGGGAGAAGCCACTCCCGATGACATGTCTTGTG
ACTATGACAACATGGCTGTGAACCCATCAGAAAGTGGGTTTGTGACTCTGGTGAGCGTGGAGAG
TGGATTTGTGACCAATGACATTTATGAGTTCTCCCCAGACCAAATGGGGAGGAGTAAGGAGTCT
GGATGGGTGGAAAATGAAATATATGGTTATTAGGACATATAAAAAACTGAAACTGACAACAATG
GAAAAGAAATGATAAGCAAAATCCTCTTATTTTCTATAAGGAAAATACACAGAAGGTCTATGAA
CAAGCTTAGATCAGGTCCTGTGGATGAGCATGTGGTCCCCACGACCTCCTGTTGGACCCCCACG
TTTTGGCTGTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTATGAGAAGGTACCTTGCCC
AGGTCTGGCACATAGTAGAGTCTCAATAAATGTCACTTGGTTGGTTGTATCTAACTTTTAAGGG
ACAGAGCTTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGGAAAACCACCTCTGTTTTCC
TTGCTCTATACAGCAGCACATATTATCATACAGACAGAAAATCCAGAATCTTTTCAAAGCCCAC
ATATGGTAGCACAGGCTGGCCTGTGCATCGGCAATTCTCATATCTGTTTTTTTCAAAGAATAAT
AAAATCAAATAAAGAGCAGGAAACAGAGTGTTAGTCTGTGTCTACAGCCCTTCCTCTGCATGTG
GCCACAGGGGACCTTTTTTTGTTTCTCCTGACATCCAGACTTGGAAATATCTAACTACTTGCAA
AACTAAAAATGAGGCCAGGCGCAGTGGCTGACGCCTGTAATCCCAGAACCTTGGGAGACCAAGA
TTGGAGGATAGCTTGAGTTCAGGAGTTCCAGACCTTCCTGGGCAAAATAGTGAGACTCTGACTC
TACAAAAAATTTAAAAATTAGCAGGGCATGGTGGCATGCGCCTGCAGTCCCAGCTACTCAGGAG
GCCGAGGTGGGGGAATTGCTTGAGCCCAGGAGGTTGAGGCTGCAGTGAGCTAGGATCACGCCAC
TGCTCTCCTGCGTGGGCAACAGAATGAGACCCTGTCTCTAAACAAAAATATTTTTTAAAGAAAC
TAAAAATGAAATTTGAGTCTCAGCTTCTAGGCTTATGTACTCCCATCCCTGATACTACACGTTG
TTCTGTTTGCATGTTTGTTACTGCAGCATCAACATAACATGACTAATAATGATGACAGTTCTAC
CTTTTGTTGACAGACCTCATTGTTTCAATTGTGTTTGGCCTCAAATTCAGAGAAAAGTTTCTCA
GCCCAGCATCAATCATATACACATTGGAGGTCTGAAAGCCATTATTTAAATCACCAGCAATTTC
CCTCAATCAGCTTCATAATCTCATATTTTAACCTTTCCTCATATGTCTTATTTTTTAATAGCTC
AGCAACTTTGCTTCACATATGGAGCCCCAACCTCTAGAGT

hide sequence

RefSeq Acc Id:

XM_006718769 ⟹ XP_006718832

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	11	111,541,334 - 111,561,745 (+)	NCBI

Sequence:

show sequence

GTCACTGCAGCCTCGGATTTGGACCTCAGAGGAGGGCAGCCAGTCTGCCGGGGAGGGACACAGA
GGCCTTGTTATAAAGTCATTTACTTCCATGATACTTCTCGAAGACTGAACTTTGAGGAAGCCAA
AGAAGCCTGCAGGAGGGATGGAGGCCAGCTAGTCAGCATCGAGTCTGAAGATGAACAGAAACTG
ATAGAAAAGTTCATTGAAAACCTCTTGCCATCTGATGGTGACTTCTGGATTGGGCTCAGGAGGC
GTGAGGAGAAACAAAGCAATAGCACAGCCTGCCAGGACCTTTATGCTTGGACTGATGGCAGCAT
ATCACAATTTAGGAACTGGTATGTGGATGAGCCATCCTGCGGCAGCGAGGTCTGCGTGGTCATG
TACCATCAGCCATCGGCACCCGCTGGCATCGGAGGCCCCTACATGTTCCAGTGGAATGATGACC
GGTGCAACATGAAGAACAATTTCATTTGCAAATATTCTGATGAGAAACCAGCAGTTCCTTCTAG
AGAAGCTGAAGGTGAGGAAACAGAGCTGACAACACCTGTACTTCCAGAAGAAACACAGGAAGAA
GATGCCAAAAAAACATTTAAAGAAAGTAGAGAAGCTGCCTTGAATCTGGCCTACATCCTAATCC
CCAGCATTCCCCTTCTCCTCCTCCTTGTGGTCACCACAGTTGTATGTTGGGTTTGGATCTGTAG
AAAAAGAAAACGGGAGCAGCCAGACCCTAGCACAAAGAAGCAACACACCATCTGGCCCTCTCCT
CACCAGGGAAACAGCCCGGACCTAGAGGTCTACAATGTCATAAGAAAACAAAGCGAAGCTGACT
TAGCTGAGACCCGGCCAGACCTGAAGAATATTTCATTCCGAGTGTGTTCGGGAGAAGCCACTCC
CGATGACATGTCTTGTGACTATGACAACATGGCTGTGAACCCATCAGAAAGTGGGTTTGTGACT
CTGGTGAGCGTGGAGAGTGGATTTGTGACCAATGACATTTATGAGTTCTCCCCAGACCAAATGG
GGAGGAGTAAGGAGTCTGGATGGGTGGAAAATGAAATATATGGTTATTAGGACATATAAAAAAC
TGAAACTGACAACAATGGAAAAGAAATGATAAGCAAAATCCTCTTATTTTCTATAAGGAAAATA
CACAGAAGGTCTATGAACAAGCTTAGATCAGGTCCTGTGGATGAGCATGTGGTCCCCACGACCT
CCTGTTGGACCCCCACGTTTTGGCTGTATCCTTTATCCCAGCCAGTCATCCAGCTCGACCTTAT
GAGAAGGTACCTTGCCCAGGTCTGGCACATAGTAGAGTCTCAATAAATGTCACTTGGTTGGTTG
TATCTAACTTTTAAGGGACAGAGCTTTACCTGGCAGTGATAAAGATGGGCTGTGGAGCTTGGAA
AACCACCTCTGTTTTCCTTGCTCTATACAGCAGCACATATTATCATACAGACAGAAAATCCAGA
ATCTTTTCAAAGCCCACATATGGTAGCACAGGCTGGCCTGTGCATCGGCAATTCTCATATCTGT
TTTTTTCAAAGAATAATAAAATCAAATAAAGAGCAGGAAACAGAGTGTTAGTCTGTGTCTACAG
CCCTTCCTCTGCATGTGGCCACAGGGGACCTTTTTTTGTTTCTCCTGACATCCAGACTTGGAAA
TATCTAACTACTTGCAAAACTAAAAATGAGGCCAGGCGCAGTGGCTGACGCCTGTAATCCCAGA
ACCTTGGGAGACCAAGATTGGAGGATAGCTTGAGTTCAGGAGTTCCAGACCTTCCTGGGCAAAA
TAGTGAGACTCTGACTCTACAAAAAATTTAAAAATTAGCAGGGCATGGTGGCATGCGCCTGCAG
TCCCAGCTACTCAGGAGGCCGAGGTGGGGGAATTGCTTGAGCCCAGGAGGTTGAGGCTGCAGTG
AGCTAGGATCACGCCACTGCTCTCCTGCGTGGGCAACAGAATGAGACCCTGTCTCTAAACAAAA
ATATTTTTTAAAGAAACTAAAAATGAAATTTGAGTCTCAGCTTCTAGGCTTATGTACTCCCATC
CCTGATACTACACGTTGTTCTGTTTGCATGTTTGTTACTGCAGCATCAACATAACATGACTAAT
AATGATGACA

hide sequence

RefSeq Acc Id:

XM_054367767 ⟹ XP_054223742

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
T2T-CHM13v2.0	11	111,551,641 - 111,571,891 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001245319	(Get FASTA)	NCBI Sequence Viewer
	NP_001245320	(Get FASTA)	NCBI Sequence Viewer
	NP_001305728	(Get FASTA)	NCBI Sequence Viewer
	NP_849156	(Get FASTA)	NCBI Sequence Viewer
	XP_006718832	(Get FASTA)	NCBI Sequence Viewer
	XP_054223742	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH25407	(Get FASTA)	NCBI Sequence Viewer
	AAQ88918	(Get FASTA)	NCBI Sequence Viewer
	BAB70946	(Get FASTA)	NCBI Sequence Viewer
	BAB70978	(Get FASTA)	NCBI Sequence Viewer
	BAG56836	(Get FASTA)	NCBI Sequence Viewer
	BAG58952	(Get FASTA)	NCBI Sequence Viewer
	BAG60438	(Get FASTA)	NCBI Sequence Viewer
	EAW67143	(Get FASTA)	NCBI Sequence Viewer
	EAW67144	(Get FASTA)	NCBI Sequence Viewer
	EAW67145	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSP00000364764
	ENSP00000364764.2
	ENSP00000364765
	ENSP00000364765.3
	ENSP00000392942
	ENSP00000392942.2
	ENSP00000431627.1
	ENSP00000432434.1
	ENSP00000434300.1
	ENSP00000434328.1
	ENSP00000434972.1
	ENSP00000486561.1
GenBank Protein	Q6UX15	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_849156 ⟸ NM_178834
- Peptide Label:	isoform 2 precursor
- UniProtKB:	B4DP26 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRPGTALQAVLLAVLLVGLRAATGRLLSGQPVCRGGTQRPCYKVIYFHDTSRRLNFEEAKEACR RDGGQLVSIESEDEQKLIEKFIENLLPSDGDFWIGLRRREEKQSNSTACQDLYAWTDGSISQFR NWYVDEPSCGSEVCVVMYHQPSAPAGIGGPYMFQWNDDRCNMKNNFICKYSDEKPAVPSREAEG EETELTTPVLPEETQEEDAKKTFKESREAALNLAYILIPSIPLLLLLVVTTVVCWVWICRKRKR EQPDPSTKKQHTIWPSPHQGNSPDLEVYNVIRKQSEADLAETRPDLKNISFRVCSGEATPDDMS CDYDNMAVNPSESGFVTLVSVESGFVTNDIYEFSPDQMGRSKESGWVENEIYGY hide sequence

RefSeq Acc Id:	NP_001245319 ⟸ NM_001258390
- Peptide Label:	isoform 1 precursor
- UniProtKB:	Q96NC5 (UniProtKB/Swiss-Prot), Q8TAY8 (UniProtKB/Swiss-Prot), B4DJU0 (UniProtKB/Swiss-Prot), A6NJB0 (UniProtKB/Swiss-Prot), Q96NF3 (UniProtKB/Swiss-Prot), Q6UX15 (UniProtKB/Swiss-Prot), B4DP26 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRPGTALQAVLLAVLLVGLRAATGRLLSASDLDLRGGQPVCRGGTQRPCYKVIYFHDTSRRLNF EEAKEACRRDGGQLVSIESEDEQKLIEKFIENLLPSDGDFWIGLRRREEKQSNSTACQDLYAWT DGSISQFRNWYVDEPSCGSEVCVVMYHQPSAPAGIGGPYMFQWNDDRCNMKNNFICKYSDEKPA VPSREAEGEETELTTPVLPEETQEEDAKKTFKESREAALNLAYILIPSIPLLLLLVVTTVVCWV WICRKRKREQPDPSTKKQHTIWPSPHQGNSPDLEVYNVIRKQSEADLAETRPDLKNISFRVCSG EATPDDMSCDYDNMAVNPSESGFVTLVSVESGFVTNDIYEFSPDQMGRSKESGWVENEIYGY hide sequence

RefSeq Acc Id:	NP_001245320 ⟸ NM_001258391
- Peptide Label:	isoform 3
- UniProtKB:	Q6UX15 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MVTSGLGSGGVRRNKAIAQPARTFMLGLMAAYHNLEKPAVPSREAEGEETELTTPVLPEETQEE DAKKTFKESREAALNLAYILIPSIPLLLLLVVTTVVCWVWICRKRKREQPDPSTKKQHTIWPSP HQGNSPDLEVYNVIRKQSEADLAETRPDLKNISFRVCSGEATPDDMSCDYDNMAVNPSESGFVT LVSVESGFVTNDIYEFSPDQMGRSKESGWVENEIYGY hide sequence

RefSeq Acc Id:	XP_006718832 ⟸ XM_006718769
- Peptide Label:	isoform X1
- UniProtKB:	B4DDS5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MYHQPSAPAGIGGPYMFQWNDDRCNMKNNFICKYSDEKPAVPSREAEGEETELTTPVLPEETQE EDAKKTFKESREAALNLAYILIPSIPLLLLLVVTTVVCWVWICRKRKREQPDPSTKKQHTIWPS PHQGNSPDLEVYNVIRKQSEADLAETRPDLKNISFRVCSGEATPDDMSCDYDNMAVNPSESGFV TLVSVESGFVTNDIYEFSPDQMGRSKESGWVENEIYGY hide sequence

RefSeq Acc Id:	NP_001305728 ⟸ NM_001318799
- Peptide Label:	isoform 4
- UniProtKB:	B4DDS5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MYHQPSAPAGIGGPYMFQWNDDRCNMKNNFICKYSDEKPAVPSREAEGEETELTTPVLPEETQE EDAKKTFKESREAALNLAYILIPSIPLLLLLVVTTVVCWVWICRKRKREQPDPSTKKQHTIWPS PHQGNSPDLEVYNVIRKQSEADLAETRPDLKNISFRVCSGEATPDDMSCDYDNMAVNPSESGFV TLVSVESGFVTNDIYEFSPDQMGRSKESGWVENEIYGY hide sequence

RefSeq Acc Id:

ENSP00000431627 ⟸ ENST00000530962

RefSeq Acc Id:

ENSP00000364764 ⟸ ENST00000375614

RefSeq Acc Id:

ENSP00000364765 ⟸ ENST00000375615

RefSeq Acc Id:

ENSP00000434972 ⟸ ENST00000533265

RefSeq Acc Id:

ENSP00000432434 ⟸ ENST00000533999

RefSeq Acc Id:

ENSP00000434300 ⟸ ENST00000525866

RefSeq Acc Id:

ENSP00000434328 ⟸ ENST00000525126

RefSeq Acc Id:

ENSP00000486561 ⟸ ENST00000528924

RefSeq Acc Id:

ENSP00000392942 ⟸ ENST00000436913

RefSeq Acc Id:	XP_054223742 ⟸ XM_054367767
- Peptide Label:	isoform X1
- UniProtKB:	B4DDS5 (UniProtKB/TrEMBL)

Protein Domains

C-type lectin

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q6UX15-F1-model_v2	AlphaFold	Q6UX15	1-382	view protein structure

Promoters

RGD ID:

7222069

Promoter ID:

EPDNEW_H16780

Type:

initiation region

Name:

LAYN_1

Description:

layilin

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	11	111,540,722 - 111,540,782	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	HGNC:29471	AgrOrtholog
COSMIC	LAYN	COSMIC
Ensembl Genes	ENSG00000204381	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript	ENST00000375614	ENTREZGENE
	ENST00000375614.7	UniProtKB/Swiss-Prot
	ENST00000375615	ENTREZGENE
	ENST00000375615.7	UniProtKB/Swiss-Prot
	ENST00000436913	ENTREZGENE
	ENST00000436913.6	UniProtKB/Swiss-Prot
	ENST00000525126.5	UniProtKB/TrEMBL
	ENST00000525866.5	UniProtKB/TrEMBL
	ENST00000528924.4	UniProtKB/TrEMBL
	ENST00000530962.5	UniProtKB/TrEMBL
	ENST00000533265.5	UniProtKB/TrEMBL
	ENST00000533999.5	UniProtKB/TrEMBL
Gene3D-CATH	3.10.100.10	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx	ENSG00000204381	GTEx
HGNC ID	HGNC:29471	ENTREZGENE
Human Proteome Map	LAYN	Human Proteome Map
InterPro	C-type_lectin-like	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	C-type_lectin-like/link_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	CTDL_fold	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	hsa:143903	UniProtKB/Swiss-Prot
NCBI Gene	143903	ENTREZGENE
OMIM	618843	OMIM
PANTHER	CHONDROLECTIN VARIANT CHODLFDELTAE	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	LAYILIN	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	Lectin_C	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB	PA142671570	PharmGKB
PROSITE	C_TYPE_LECTIN_2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART	CLECT	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SSF56436	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A0D9SFG0_HUMAN	UniProtKB/TrEMBL
	A6NJB0	ENTREZGENE
	B4DDS5	ENTREZGENE, UniProtKB/TrEMBL
	B4DJU0	ENTREZGENE
	B4DP26	ENTREZGENE, UniProtKB/TrEMBL
	E9PK64_HUMAN	UniProtKB/TrEMBL
	E9PMI0_HUMAN	UniProtKB/TrEMBL
	E9PQU7_HUMAN	UniProtKB/TrEMBL
	E9PQY8_HUMAN	UniProtKB/TrEMBL
	E9PR90_HUMAN	UniProtKB/TrEMBL
	LAYN_HUMAN	UniProtKB/Swiss-Prot, ENTREZGENE
	Q8TAY8	ENTREZGENE
	Q96NC5	ENTREZGENE
	Q96NF3	ENTREZGENE
UniProt Secondary	A6NJB0	UniProtKB/Swiss-Prot
	B4DJU0	UniProtKB/Swiss-Prot
	Q8TAY8	UniProtKB/Swiss-Prot
	Q96NC5	UniProtKB/Swiss-Prot
	Q96NF3	UniProtKB/Swiss-Prot

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Human Phenotype Annotations - ClinVar

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Imported Disease Annotations - ClinVar

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