PROCA1 (protein interacting with cyclin A1)

Gene: PROCA1 (protein interacting with cyclin A1) Homo sapiens

Analyze

Symbol:

PROCA1

Name:

protein interacting with cyclin A1

RGD ID:

1603267

HGNC Page

HGNC:28600

Description:

Enables cyclin binding activity. Predicted to be involved in arachidonic acid secretion and phospholipid metabolic process.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

MGC39650; proline-rich cyclin A1-interacting protein

RGD Orthologs

Alliance Genes

More Info

more info ...

Allele / Splice:

See ClinVar data

Latest Assembly:

GRCh38 - Human Genome Assembly GRCh38

Position:

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	28,703,197 - 28,711,888 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	28,703,197 - 28,711,888 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	17	27,030,215 - 27,038,906 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	24,054,661 - 24,062,999 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	17	23,889,570 - 23,898,038 (-)	NCBI		Celera
Cytogenetic Map	17	q11.2	NCBI
HuRef	17	23,239,164 - 23,247,772 (-)	NCBI		HuRef
CHM1_1	17	27,093,006 - 27,101,344 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	17	29,645,981 - 29,654,697 (-)	NCBI		T2T-CHM13v2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (IAGP)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dichloroethane (ISO)

17beta-estradiol (EXP)

2,2',4,4',5,5'-hexachlorobiphenyl (ISO)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

4-hydroxyphenyl retinamide (ISO)

6-propyl-2-thiouracil (ISO)

aflatoxin B1 (EXP)

aflatoxin M1 (EXP)

amitrole (ISO)

atrazine (ISO)

benzo[a]pyrene (EXP)

benzo[b]fluoranthene (ISO)

benzo[e]pyrene (EXP)

bisphenol A (ISO)

butanal (EXP)

cadmium atom (EXP)

cadmium dichloride (EXP)

carbon nanotube (ISO)

dibutyl phthalate (ISO)

dorsomorphin (EXP)

ethylparaben (EXP)

folic acid (ISO)

genistein (ISO)

gentamycin (ISO)

glycidol (ISO)

glycidyl methacrylate (EXP)

methapyrilene (EXP)

methimazole (ISO)

ozone (ISO)

paracetamol (EXP,ISO)

PCB138 (ISO)

pirinixic acid (ISO)

resveratrol (EXP)

SB 431542 (EXP)

thioacetamide (ISO)

toluene (EXP)

trichloroethene (ISO)

trichostatin A (EXP)

triptonide (ISO)

troglitazone (ISO)

urethane (EXP)

valproic acid (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

arachidonic acid secretion (IEA)

phospholipid metabolic process (IEA)

Molecular Function

cyclin binding (IPI)

phospholipase A2 activity (IEA)

protein binding (IPI)

References

References - curated

#	Reference Title	Reference Citation
1.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:15159402	PMID:16344560	PMID:17207965	PMID:29449217	PMID:29987050	PMID:30021884

Genomics

Comparative Map Data

PROCA1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	28,703,197 - 28,711,888 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	28,703,197 - 28,711,888 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	17	27,030,215 - 27,038,906 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	24,054,661 - 24,062,999 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	17	23,889,570 - 23,898,038 (-)	NCBI		Celera
Cytogenetic Map	17	q11.2	NCBI
HuRef	17	23,239,164 - 23,247,772 (-)	NCBI		HuRef
CHM1_1	17	27,093,006 - 27,101,344 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	17	29,645,981 - 29,654,697 (-)	NCBI		T2T-CHM13v2.0

Proca1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	78,083,086 - 78,096,589 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	78,084,218 - 78,096,589 (+)	Ensembl		GRCm39 Ensembl
GRCm38	11	78,192,677 - 78,205,763 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	78,193,392 - 78,205,763 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	78,006,894 - 78,019,265 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	78,011,068 - 78,021,957 (+)	NCBI		MGSCv36	mm8
Celera	11	86,225,728 - 86,234,225 (-)	NCBI		Celera
Cytogenetic Map	11	B5	NCBI
cM Map	11	46.74	NCBI

Proca1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	63,588,061 - 63,601,011 (+)	NCBI		GRCr8
mRatBN7.2	10	63,090,018 - 63,102,941 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	63,090,018 - 63,102,940 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	67,722,308 - 67,735,231 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	67,227,662 - 67,240,585 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	62,698,537 - 62,711,467 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	65,454,451 - 65,469,491 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	65,454,658 - 65,469,490 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	66,167,555 - 66,180,522 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	64,426,828 - 64,440,614 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	10	62,067,529 - 62,080,628 (+)	NCBI		Celera
Cytogenetic Map	10	q25	NCBI

Proca1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955481	4,451,769 - 4,460,922 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955481	4,451,649 - 4,461,296 (+)	NCBI	ChiLan1.0	ChiLan1.0

PROCA1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	35,747,350 - 35,756,210 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	37,627,857 - 37,636,399 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	28,063,498 - 28,072,327 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	17	28,568,429 - 28,577,232 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	28,568,429 - 28,577,232 (+)	Ensembl	panpan1.1		panPan2

PROCA1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	42,897,015 - 42,904,460 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	9	42,897,392 - 42,904,432 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	42,053,097 - 42,061,320 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	43,715,268 - 43,723,463 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	9	43,715,645 - 43,723,142 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	9	42,498,694 - 42,506,888 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	42,790,919 - 42,799,114 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	42,868,919 - 42,877,142 (-)	NCBI		UU_Cfam_GSD_1.0

Proca1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	42,033,970 - 42,043,281 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936538	4,911,921 - 4,921,284 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936538	4,911,915 - 4,921,281 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PROCA1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	44,942,148 - 44,947,417 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	12	44,942,146 - 44,950,899 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	46,926,713 - 46,934,097 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PROCA1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	22,471,135 - 22,480,161 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	16	22,470,629 - 22,474,767 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666075	7,642,305 - 7,652,705 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Proca1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624786	1,273,326 - 1,283,543 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624786	1,272,959 - 1,283,923 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in PROCA1
27 total Variants

Clinical Variants

Name	Type	Condition(s)	Position(s)	Clinical significance
NM_003170.3(SUPT6H):c.5135C>T (p.Ser1712Phe)	single nucleotide variant	Malignant melanoma [RCV000071384]	Chr17:28701579 [GRCh38] Chr17:27028597 [GRCh37] Chr17:24052724 [NCBI36] Chr17:17q11.2	not provided
GRCh38/hg38 17q11.2(chr17:28283125-28904397)x3	copy number gain	See cases [RCV000136494]	Chr17:28283125..28904397 [GRCh38] Chr17:26610151..27231415 [GRCh37] Chr17:23634278..24255541 [NCBI36] Chr17:17q11.2	benign
GRCh37/hg19 17q11.1-11.2(chr17:25403446-31685464)x3	copy number gain	not provided [RCV000762776]	Chr17:25403446..31685464 [GRCh37] Chr17:17q11.1-11.2	likely pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:526-81041938)	copy number gain	See cases [RCV000511439]	Chr17:526..81041938 [GRCh37] Chr17:17p13.3-q25.3	pathogenic
GRCh37/hg19 17q11.1-11.2(chr17:25248166-30645676)x1	copy number loss	Mitogen-activated protein kinase kinase inhibitor response [RCV000626439]	Chr17:25248166..30645676 [GRCh37] Chr17:17q11.1-11.2	drug response
NM_001366301.1(PROCA1):c.362C>T (p.Thr121Ile)	single nucleotide variant	Inborn genetic diseases [RCV003285301]	Chr17:28704385 [GRCh38] Chr17:27031403 [GRCh37] Chr17:17q11.2	uncertain significance
GRCh37/hg19 17p13.3-q25.3(chr17:526-81041938)x3	copy number gain	See cases [RCV000512441]	Chr17:526..81041938 [GRCh37] Chr17:17p13.3-q25.3	pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:12344-81057996)x3	copy number gain	not provided [RCV000739325]	Chr17:12344..81057996 [GRCh37] Chr17:17p13.3-q25.3	pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:8547-81060040)x3	copy number gain	not provided [RCV000739324]	Chr17:8547..81060040 [GRCh37] Chr17:17p13.3-q25.3	pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:7214-81058310)x3	copy number gain	not provided [RCV000739320]	Chr17:7214..81058310 [GRCh37] Chr17:17p13.3-q25.3	pathogenic
GRCh37/hg19 17p11.2-q11.2(chr17:21279289-27474974)x2	copy number gain	not provided [RCV000739439]	Chr17:21279289..27474974 [GRCh37] Chr17:17p11.2-q11.2	likely pathogenic
NM_001366301.1(PROCA1):c.601G>A (p.Gly201Ser)	single nucleotide variant	not provided [RCV000969679]	Chr17:28704052 [GRCh38] Chr17:27031070 [GRCh37] Chr17:17q11.2	benign
NM_001366301.1(PROCA1):c.978A>C (p.Ser326=)	single nucleotide variant	not provided [RCV000927791]	Chr17:28703675 [GRCh38] Chr17:27030693 [GRCh37] Chr17:17q11.2	likely benign
NM_001366301.1(PROCA1):c.1041dup (p.Arg348fs)	duplication	not provided [RCV000894459]	Chr17:28703611..28703612 [GRCh38] Chr17:27030629..27030630 [GRCh37] Chr17:17q11.2	benign
GRCh37/hg19 17p11.2-q21.2(chr17:21690653-38772647)x3	copy number gain	not provided [RCV000846852]	Chr17:21690653..38772647 [GRCh37] Chr17:17p11.2-q21.2	pathogenic
NM_001366301.1(PROCA1):c.726A>G (p.Lys242=)	single nucleotide variant	not provided [RCV000974295]	Chr17:28703927 [GRCh38] Chr17:27030945 [GRCh37] Chr17:17q11.2	benign
GRCh37/hg19 17q11.1-11.2(chr17:25274363-28450707)x3	copy number gain	not provided [RCV001006886]	Chr17:25274363..28450707 [GRCh37] Chr17:17q11.1-11.2	pathogenic
GRCh37/hg19 17p11.2-q11.2(chr17:21690653-28281232)	copy number gain	not specified [RCV002052591]	Chr17:21690653..28281232 [GRCh37] Chr17:17p11.2-q11.2	pathogenic
NC_000017.10:g.(?_26684694)_(27581367_?)dup	duplication	not provided [RCV003116316]	Chr17:26684694..27581367 [GRCh37] Chr17:17q11.2	uncertain significance
NC_000017.10:g.(?_26684694)_(29701173_?)dup	duplication	not provided [RCV003123018]	Chr17:26684694..29701173 [GRCh37] Chr17:17q11.2	uncertain significance
NM_001366301.1(PROCA1):c.563C>T (p.Pro188Leu)	single nucleotide variant	Inborn genetic diseases [RCV002779323]	Chr17:28704090 [GRCh38] Chr17:27031108 [GRCh37] Chr17:17q11.2	uncertain significance
NM_001366301.1(PROCA1):c.908T>G (p.Leu303Arg)	single nucleotide variant	Inborn genetic diseases [RCV002773029]	Chr17:28703745 [GRCh38] Chr17:27030763 [GRCh37] Chr17:17q11.2	uncertain significance
NM_001366301.1(PROCA1):c.767A>C (p.Lys256Thr)	single nucleotide variant	Inborn genetic diseases [RCV002785027]	Chr17:28703886 [GRCh38] Chr17:27030904 [GRCh37] Chr17:17q11.2	uncertain significance
NM_001366301.1(PROCA1):c.1070C>A (p.Pro357Gln)	single nucleotide variant	Inborn genetic diseases [RCV002912404]	Chr17:28703583 [GRCh38] Chr17:27030601 [GRCh37] Chr17:17q11.2	uncertain significance
NM_001366301.1(PROCA1):c.290A>G (p.Asn97Ser)	single nucleotide variant	Inborn genetic diseases [RCV002767156]	Chr17:28704729 [GRCh38] Chr17:27031747 [GRCh37] Chr17:17q11.2	likely benign
NM_001366301.1(PROCA1):c.353C>T (p.Ala118Val)	single nucleotide variant	Inborn genetic diseases [RCV002956138]	Chr17:28704394 [GRCh38] Chr17:27031412 [GRCh37] Chr17:17q11.2	likely benign
NM_001366301.1(PROCA1):c.965T>C (p.Ile322Thr)	single nucleotide variant	Inborn genetic diseases [RCV002931383]	Chr17:28703688 [GRCh38] Chr17:27030706 [GRCh37] Chr17:17q11.2	uncertain significance
NM_001366301.1(PROCA1):c.525A>C (p.Glu175Asp)	single nucleotide variant	Inborn genetic diseases [RCV002931553]	Chr17:28704128 [GRCh38] Chr17:27031146 [GRCh37] Chr17:17q11.2	uncertain significance
NM_001366301.1(PROCA1):c.571G>A (p.Val191Met)	single nucleotide variant	Inborn genetic diseases [RCV002672765]	Chr17:28704082 [GRCh38] Chr17:27031100 [GRCh37] Chr17:17q11.2	uncertain significance
NM_001366301.1(PROCA1):c.620G>A (p.Gly207Asp)	single nucleotide variant	Inborn genetic diseases [RCV002679163]	Chr17:28704033 [GRCh38] Chr17:27031051 [GRCh37] Chr17:17q11.2	uncertain significance
NM_001366301.1(PROCA1):c.409G>A (p.Glu137Lys)	single nucleotide variant	Inborn genetic diseases [RCV002679490]	Chr17:28704338 [GRCh38] Chr17:27031356 [GRCh37] Chr17:17q11.2	uncertain significance
NM_001366301.1(PROCA1):c.262C>T (p.Arg88Cys)	single nucleotide variant	Inborn genetic diseases [RCV003279905]	Chr17:28704757 [GRCh38] Chr17:27031775 [GRCh37] Chr17:17q11.2	likely benign
NM_001366301.1(PROCA1):c.302G>A (p.Cys101Tyr)	single nucleotide variant	Inborn genetic diseases [RCV003211974]	Chr17:28704717 [GRCh38] Chr17:27031735 [GRCh37] Chr17:17q11.2	uncertain significance
NM_001366301.1(PROCA1):c.1061A>G (p.Lys354Arg)	single nucleotide variant	Inborn genetic diseases [RCV003219412]	Chr17:28703592 [GRCh38] Chr17:27030610 [GRCh37] Chr17:17q11.2	uncertain significance
NM_001366301.1(PROCA1):c.62C>T (p.Ala21Val)	single nucleotide variant	Inborn genetic diseases [RCV003191815]	Chr17:28711599 [GRCh38] Chr17:27038617 [GRCh37] Chr17:17q11.2	likely benign
NM_001366301.1(PROCA1):c.425G>A (p.Arg142Gln)	single nucleotide variant	Inborn genetic diseases [RCV003192481]	Chr17:28704322 [GRCh38] Chr17:27031340 [GRCh37] Chr17:17q11.2	uncertain significance
NM_001366301.1(PROCA1):c.365G>T (p.Cys122Phe)	single nucleotide variant	Inborn genetic diseases [RCV003194833]	Chr17:28704382 [GRCh38] Chr17:27031400 [GRCh37] Chr17:17q11.2	uncertain significance
GRCh37/hg19 17q11.1-11.2(chr17:25263507-27829791)x3	copy number gain	Developmental delay with or without intellectual impairment or behavioral abnormalities [RCV003329553]	Chr17:25263507..27829791 [GRCh37] Chr17:17q11.1-11.2	uncertain significance
NM_001366301.1(PROCA1):c.54G>T (p.Glu18Asp)	single nucleotide variant	Inborn genetic diseases [RCV003360303]	Chr17:28711607 [GRCh38] Chr17:27038625 [GRCh37] Chr17:17q11.2	uncertain significance
NM_001366301.1(PROCA1):c.242C>G (p.Pro81Arg)	single nucleotide variant	Inborn genetic diseases [RCV003372373]	Chr17:28704777 [GRCh38] Chr17:27031795 [GRCh37] Chr17:17q11.2	uncertain significance
NM_001366301.1(PROCA1):c.838G>A (p.Val280Met)	single nucleotide variant	Inborn genetic diseases [RCV003364954]	Chr17:28703815 [GRCh38] Chr17:27030833 [GRCh37] Chr17:17q11.2	uncertain significance
NM_001366301.1(PROCA1):c.934C>G (p.Arg312Gly)	single nucleotide variant	Inborn genetic diseases [RCV003364955]	Chr17:28703719 [GRCh38] Chr17:27030737 [GRCh37] Chr17:17q11.2	uncertain significance
NM_001366301.1(PROCA1):c.802A>G (p.Lys268Glu)	single nucleotide variant	Inborn genetic diseases [RCV003369342]	Chr17:28703851 [GRCh38] Chr17:27030869 [GRCh37] Chr17:17q11.2	uncertain significance

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	3215
Count of miRNA genes:	874
Interacting mature miRNAs:	1080
Transcripts:	ENST00000301039, ENST00000415329, ENST00000422880, ENST00000439862, ENST00000473751, ENST00000495203, ENST00000578097, ENST00000579650, ENST00000581289, ENST00000584073
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system

circulatory system

endocrine system

exocrine system

hemolymphoid system

hepatobiliary system

integumental system

musculoskeletal system

nervous system

renal system

reproductive system

respiratory system

sensory system

visual system

adipose tissue

appendage

entire extraembryonic component

High

Medium

171

140

138

468

Low

2375

2819

1508

432

1712

277

3531

1413

3580

392

960

1542

168

1197

2100

Below cutoff

165

208

186

184

684

770

660

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001304949	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001304951	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001304952	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001304953	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001304954	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001366301	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001366302	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001366303	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_152465	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006721723	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_011524398	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_011524399	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_011524401	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_047435473	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_047435474	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_047435475	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_047435476	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_047435477	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_054315227	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_054315228	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_054315229	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_054315230	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_054315231	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_054315232	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC010761	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AI797917	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK301868	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK310299	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AL137531	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY601916	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC029574	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BQ215318	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CD300282	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH471159	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CP068261	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CR984201	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DB038438	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HY044209	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENST00000301039 ⟹ ENSP00000301039

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	17	28,703,197 - 28,711,854 (-)	Ensembl

RefSeq Acc Id:

ENST00000415329 ⟹ ENSP00000468747

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	17	28,703,714 - 28,707,883 (-)	Ensembl

RefSeq Acc Id:

ENST00000422880

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	17	28,704,307 - 28,711,086 (-)	Ensembl

RefSeq Acc Id:

ENST00000439862 ⟹ ENSP00000411400

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	17	28,703,516 - 28,711,660 (-)	Ensembl

RefSeq Acc Id:

ENST00000473751 ⟹ ENSP00000463898

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	17	28,704,008 - 28,711,682 (-)	Ensembl

RefSeq Acc Id:

ENST00000495203

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	17	28,703,916 - 28,707,449 (-)	Ensembl

RefSeq Acc Id:

ENST00000578097

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	17	28,704,531 - 28,711,091 (-)	Ensembl

RefSeq Acc Id:

ENST00000579650

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	17	28,704,081 - 28,711,299 (-)	Ensembl

RefSeq Acc Id:

ENST00000581289 ⟹ ENSP00000464600

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	17	28,703,625 - 28,711,747 (-)	Ensembl

RefSeq Acc Id:

ENST00000584073

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	17	28,704,084 - 28,706,164 (-)	Ensembl

RefSeq Acc Id:

ENST00000674362

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	17	28,703,281 - 28,710,104 (-)	Ensembl

RefSeq Acc Id:

ENST00000682792 ⟹ ENSP00000507242

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	17	28,703,197 - 28,711,888 (-)	Ensembl

RefSeq Acc Id:

NM_001304949 ⟹ NP_001291878

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	17	28,703,197 - 28,711,888 (-)	NCBI
CHM1_1	17	27,092,687 - 27,101,397 (-)	NCBI
T2T-CHM13v2.0	17	29,645,981 - 29,654,697 (-)	NCBI

Sequence:

show sequence

GGATGAAGAACGCGGCTGACGCTGAGACCCAGCTGGGAAGACTACGCAGCCTGGAGCCGGGCTG
GGGAGGCCGGCGGGGGCTGCGCCAGCATGAGGCGGGGTTAGGGGCTAGGCGGGGGCGAAGCCGA
GACTGGAGTTCACGGCTGGGCCGAGGGCTCGGCCGGGCTGAGGCTCAGGGTTGGACTTCACGCA
AGAGTCCTGTAGAGACGAAGACCTGGGCGGAGAGCGATGTGGGTCAGGACGACGCTCACAATTG
AAAGATGGACTAAGGAAAAGACCGAGCCCAAGGCCCGCTCGTGGGATGAGAGCAGATGCCGCGG
TGGCTGGAAGAGAAGAAAGAAGTGAAGACACTGAGCTCACTGAAGGTGACTGCAAGGAGCCTGA
CAAGTGCTGCTGGAGACACAAGCAGTGCACTGGGCACATCATCTACCCTTTCGCCTCTGACTGT
GTCCGCCACAGCCTGCACCTACACTCTGTCAACCACTGCAACTGTAATTCTAGGCTGAAGGACT
CTTCAGAGGATAGCAGCAGCTCCCGGGGCGCGGGCCCAACCTGCTCCCATGTCATCGAGTCCCC
TTGCTTTGAGCTCACACCGGAGGAGGAGCATGTGGAGCGATTCCGGTATGGCTGGTGCAAAAGC
TACAGACCTGTCTCTGTGGCAGTGATCCACCATCCACTCTACCATGAGTGTGGGGCAGATGATC
TAAATGAAGAAGAGGAAGAGGAGGAGGAGGAAAGCAAGCCCCCCATCCCGACACAGGTGGGGCC
CGCCACCGCCTCCCCTGACCTAGGCACCAGCATGGCCACTGGTACCCCTGACTCCACAGCGCCC
ATCACCATCTGGCGCTCTGAGAGCCCCACAGGGAAGGGTCAGGGCAGCAAGGTGATCAAGAAGG
TAAAGAAGAAAAAGGAAAAAGAGAAAGACAAGGAGGAGATGGATGAGAAGGCAAAGCTGAAGAA
AAAAGCCAAGAAAGGCCAGTTGACTAAGAAGAAAAGCCCGGTTAAATTGGAGCCTTCCCCGCCA
GACGTGAGCCGATCATTAAGCGCAAGACAGCTGGCCAGGATGTCCGAGTCCAGCCCAGAAAGCC
GGGAAGAGCTGGAGAGCGAGGACAGTTACAATGGCCGGGGGCAGGGAGAACTGTCCAGCGAGGA
TATTGTGGAATCATCATCGCCCAGGAAGAGAGAGAACACAGTCCAGGCCAAAAAGACAGGGGCA
AAGCCCTCACAAGCCAGGAAGGTAAACAAGAGAAAATCTCCCCCAGGATCAAACCCCAACCTCA
GTTGAGGCCAGGGTGGTCAGGGTGCAGAATAAATGCCATCGAGCCTGTGGCTGGCCCTCTGCTG
CTGTTCTCTCCCTCCAACCTGGCTGTTTCTTGCGGGGCAAGGGGTGGGCTCAGGGCTGCAGGGG
TTTCTCAAAGGCAATCCAGCTTTCACAAAGGAAGCCCATGGGAAGGCAGGTGGGAGGGAAAGGA
AGGGGCACAGCCCTATTTCTTCCTACCTGCTAGGACAAGGTGGAAGAGTGTATCTGGGGTGGGA
AGGAGGGCTTCCCCTCTCTGCTGCGAGAGACTGGTCTGTGTGAAATCCACTTCTGGGACAGGCA
GTACTGTCTGCAGCGATACCCCCAATAAACGGAACTTTTTAACCCA

hide sequence

RefSeq Acc Id:

NM_001304951 ⟹ NP_001291880

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	17	28,703,197 - 28,711,888 (-)	NCBI
CHM1_1	17	27,092,687 - 27,101,397 (-)	NCBI
T2T-CHM13v2.0	17	29,645,981 - 29,654,697 (-)	NCBI

Sequence:

show sequence

GGATGAAGAACGCGGCTGACGCTGAGACCCAGCTGGGAAGACTACGCAGCCTGGAGCCGGGCTG
GGGAGGCCGGCGGGGGCTGCGCCAGCATGAGGCGGGGTTAGGGGCTAGGCGGGGGCGAAGCCGA
GACTGGAGTTCACGGCTGGGCCGAGGGCTCGGCCGGGCTGAGGCTCAGGGTTGGACTTCACGCA
AGAGTCCTGTAGAGACGAAGACCTGGGCGGAGAGCGATGTGGGTCAGGACGACGCTCACAATTG
AAAGATGGACTAAGGAAAAGACCGAGCCCAAGGCCCGCTCGTGGGATGAGAGCAGATGCCGCGG
TGCAAAAGCTACAGACCTGTCTCTGTGGCAGTGATCCACCATCCACTCTACCATGAGTGTGGGG
CAGATGATCTAAATGAAGAAGAGGAAGAGGAGGAGGAGGAAAGCAAGCCCCCCATCCCGACACA
GGTGGGGCCCGCCACCGCCTCCCCTGACCTAGGCACCAGCATGGCCACTGGTACCCCTGACTCC
ACAGCGCCCATCACCATCTGGCGCTCTGAGAGCCCCACAGGGAAGGGTCAGGGCAGCAAGGTGA
TCAAGAAGGTAAAGAAGAAAAAGGAAAAAGAGAAAGACAAGGAGGAGATGGATGAGAAGGCAAA
GCTGAAGAAAAAAGCCAAGAAAGGCCAGTTGACTAAGAAGAAAAGCCCGGTTAAATTGGAGCCT
TCCCCGCCAGACGTGAGCCGATCATTAAGCGCAAGACAGCTGGCCAGGATGTCCGAGTCCAGCC
CAGAAAGCCGGGAAGAGCTGGAGAGCGAGGACAGTTACAATGGCCGGGGGCAGGGAGAACTGTC
CAGCGAGGATATTGTGGAATCATCATCGCCCAGGAAGAGAGAGAACACAGTCCAGGCCAAAAAG
ACAGGGGCAAAGCCCTCACAAGCCAGGAAGGTAAACAAGAGAAAATCTCCCCCAGGATCAAACC
CCAACCTCAGTTGAGGCCAGGGTGGTCAGGGTGCAGAATAAATGCCATCGAGCCTGTGGCTGGC
CCTCTGCTGCTGTTCTCTCCCTCCAACCTGGCTGTTTCTTGCGGGGCAAGGGGTGGGCTCAGGG
CTGCAGGGGTTTCTCAAAGGCAATCCAGCTTTCACAAAGGAAGCCCATGGGAAGGCAGGTGGGA
GGGAAAGGAAGGGGCACAGCCCTATTTCTTCCTACCTGCTAGGACAAGGTGGAAGAGTGTATCT
GGGGTGGGAAGGAGGGCTTCCCCTCTCTGCTGCGAGAGACTGGTCTGTGTGAAATCCACTTCTG
GGACAGGCAGTACTGTCTGCAGCGATACCCCCAATAAACGGAACTTTTTAACCCA

hide sequence

RefSeq Acc Id:

NM_001304952 ⟹ NP_001291881

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	17	28,703,197 - 28,711,299 (-)	NCBI
CHM1_1	17	27,092,687 - 27,100,581 (-)	NCBI
T2T-CHM13v2.0	17	29,645,981 - 29,654,108 (-)	NCBI

Sequence:

show sequence

AGAGCTGGAACGCTCGGCTATCGGACTGGGTGGCACCGGGCGCAGGCCGCTGCCCTTGAAGCGC
CGGCCTTGGCTGGAGCCCGTGGACCAGCGCCCACCCGGACGCCGGGGCGGGAGCGGGCGGTTCC
ATCGACCCTGAGGGTGGACCAAGGAGACTGAGGGTTCCACCCGTGGCATCACAATTACCTCCGC
GGCGGCGAGGCCAGAGAGGCATTTCCAAGGAGACGCGGGCGCACTGCCCCTCCCTTGCTTCCTC
CTCTTCCCTCCTTCCTCTCCTAGTTTCTTCCCTCCCTTCCCGCCCTACTCCTTCCCTCCCTTCC
CACCCTACTCCTTTCGGCTGCTCTGGTGCCCACCCCCAGTGCCTCGAGGTCGAGGAGAGCTCCT
CGGCCCCGCAGGACGGGGAGGATTCTGTACAGATGAGCATAACTTATGTAAACAGGTTACCCAG
CTGGGAGAGAGGACATCTGCTGGCTGGTGTGGCGTCCAGCACTGATGTGTCTACCTTCTCTGAA
GGTGACTGCAAGGAGCCTGACAAGTGCTGCTGGAGACACAAGCAGTGCACTGGGCACATCATCT
ACCCTTTCGCCTCTGACTGTGTCCGCCACAGCCTGCACCTACACTCTGTCAACCACTGCAACTG
TAATTCTAGGCTGAAGGACTCTTCAGAGGATAGCAGCAGCTCCCGGGGCGCGGGCCCAACCTGC
TCCCATGTCATCGAGTCCCCTTGCTTTGAGCTCACACCGGAGGAGGAGCATGTGGAGCGATTCC
GGTATGGCTGGTGCAAAAGCTACAGACCTGTCTCTGTGGCAGTGATCCACCATCCACTCTACCA
TGAGTGTGGGGCAGATGATCTAAATGAAGAAGAGGAAGAGGAGGAGGAGGAAAGCAAGCCCCCC
ATCCCGACACAGGTGGGGCCCGCCACCGCCTCCCCTGACCTAGGCACCAGCATGGCCACTGGTA
CCCCTGACTCCACAGCGCCCATCACCATCTGGCGCTCTGAGAGCCCCACAGGGAAGGGTCAGGG
CAGCAAGGTGATCAAGAAGGTAAAGAAGAAAAAGGAAAAAGAGAAAGACAAGGAGGAGATGGAT
GAGAAGGCAAAGCTGAAGAAAAAAGCCAAGAAAGGCCAGTTGACTAAGAAGAAAAGCCCGGTTA
AATTGGAGCCTTCCCCGCCAGACGTGAGCCGATCATTAAGCGCAAGACAGCTGGCCAGGATGTC
CGAGTCCAGCCCAGAAAGCCGGGAAGAGCTGGAGAGCGAGGACAGTTACAATGGCCGGGGGCAG
GGAGAACTGTCCAGCGAGGATATTGTGGAATCATCATCGCCCAGGAAGAGAGAGAACACAGTCC
AGGCCAAAAAGACAGGGGCAAAGCCCTCACAAGCCAGGAAGGTAAACAAGAGAAAATCTCCCCC
AGGATCAAACCCCAACCTCAGTTGAGGCCAGGGTGGTCAGGGTGCAGAATAAATGCCATCGAGC
CTGTGGCTGGCCCTCTGCTGCTGTTCTCTCCCTCCAACCTGGCTGTTTCTTGCGGGGCAAGGGG
TGGGCTCAGGGCTGCAGGGGTTTCTCAAAGGCAATCCAGCTTTCACAAAGGAAGCCCATGGGAA
GGCAGGTGGGAGGGAAAGGAAGGGGCACAGCCCTATTTCTTCCTACCTGCTAGGACAAGGTGGA
AGAGTGTATCTGGGGTGGGAAGGAGGGCTTCCCCTCTCTGCTGCGAGAGACTGGTCTGTGTGAA
ATCCACTTCTGGGACAGGCAGTACTGTCTGCAGCGATACCCCCAATAAACGGAACTTTTTAACC
CA

hide sequence

RefSeq Acc Id:

NM_001304953 ⟹ NP_001291882

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	17	28,703,197 - 28,711,888 (-)	NCBI
CHM1_1	17	27,092,687 - 27,101,397 (-)	NCBI
T2T-CHM13v2.0	17	29,645,981 - 29,654,697 (-)	NCBI

Sequence:

show sequence

GGATGAAGAACGCGGCTGACGCTGAGACCCAGCTGGGAAGACTACGCAGCCTGGAGCCGGGCTG
GGGAGGCCGGCGGGGGCTGCGCCAGCATGAGGCGGGGTTAGGGGCTAGGCGGGGGCGAAGCCGA
GACTGGAGTTCACGGCTGGGCCGAGGGCTCGGCCGGGCTGAGGCTCAGGGTTGGACTTCACGCA
AGAGTCCTGTAGAGACGAAGACCTGGGCGGAGAGCGATGTGGGTCAGGACGACGCTCACAATTG
AAAGATGGACTAAGGAAAAGACCGAGCCCAAGGCCCGCTCGTGGGATGAGAGCAGATGCCGCGA
TGTAAACAGGTTACCCAGCTGGGAGAGAGGACATCTGCTGGCTGGTGTGGCGTCCAGCACTGAT
GTGTCTACCTTCTCTGAAGGTGACTGCAAGGAGCCTGACAAGTGCTGCTGGAGACACAAGCAGT
GCACTGGGCACATCATCTACCCTTTCGCCTCTGACTGTGTCCGCCACAGCCTGCACCTACACTC
TGTCAACCACTGCAACTGTAATTCTAGCTTTGAATTGGTGCTGCCAGCCCAGTCCCAGCTCTGC
ACACCTTGCTCTGCTCTAAGAGAAATGGGGAGGAGGTCTGTTGGCCTGAGGCAGGCCCAGCGGA
AGCCCACTGTCCCTCAGGCTTCTGGCTCTGGGTCCCTGGGGGAGTGATGGGAGCCAGGCTGAGA
GTCCCATGTGTGGCAGGCTGAAGGACTCTTCAGAGGATAGCAGCAGCTCCCGGGGCGCGGGCCC
AACCTGCTCCCATGTCATCGAGTCCCCTTGCTTTGAGCTCACACCGGAGGAGGAGCATGTGGAG
CGATTCCGGTATGGCTGGTGCAAAAGCTACAGACCTGTCTCTGTGGCAGTGATCCACCATCCAC
TCTACCATGAGTGTGGGGCAGATGATCTAAATGAAGAAGAGGAAGAGGAGGAGGAGGAAAGCAA
GCCCCCCATCCCGACACAGGTGGGGCCCGCCACCGCCTCCCCTGACCTAGGCACCAGCATGGCC
ACTGGTACCCCTGACTCCACAGCGCCCATCACCATCTGGCGCTCTGAGAGCCCCACAGGGAAGG
GTCAGGGCAGCAAGGTGATCAAGAAGGTAAAGAAGAAAAAGGAAAAAGAGAAAGACAAGGAGGA
GATGGATGAGAAGGCAAAGCTGAAGAAAAAAGCCAAGAAAGGCCAGTTGACTAAGAAGAAAAGC
CCGGTTAAATTGGAGCCTTCCCCGCCAGACGTGAGCCGATCATTAAGCGCAAGACAGCTGGCCA
GGATGTCCGAGTCCAGCCCAGAAAGCCGGGAAGAGCTGGAGAGCGAGGACAGTTACAATGGCCG
GGGGCAGGGAGAACTGTCCAGCGAGGATATTGTGGAATCATCATCGCCCAGGAAGAGAGAGAAC
ACAGTCCAGGCCAAAAAGACAGGGGCAAAGCCCTCACAAGCCAGGAAGGTAAACAAGAGAAAAT
CTCCCCCAGGATCAAACCCCAACCTCAGTTGAGGCCAGGGTGGTCAGGGTGCAGAATAAATGCC
ATCGAGCCTGTGGCTGGCCCTCTGCTGCTGTTCTCTCCCTCCAACCTGGCTGTTTCTTGCGGGG
CAAGGGGTGGGCTCAGGGCTGCAGGGGTTTCTCAAAGGCAATCCAGCTTTCACAAAGGAAGCCC
ATGGGAAGGCAGGTGGGAGGGAAAGGAAGGGGCACAGCCCTATTTCTTCCTACCTGCTAGGACA
AGGTGGAAGAGTGTATCTGGGGTGGGAAGGAGGGCTTCCCCTCTCTGCTGCGAGAGACTGGTCT
GTGTGAAATCCACTTCTGGGACAGGCAGTACTGTCTGCAGCGATACCCCCAATAAACGGAACTT
TTTAACCCA

hide sequence

RefSeq Acc Id:

NM_001304954 ⟹ NP_001291883

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	17	28,703,197 - 28,711,299 (-)	NCBI
CHM1_1	17	27,092,687 - 27,100,581 (-)	NCBI
T2T-CHM13v2.0	17	29,645,981 - 29,654,108 (-)	NCBI

Sequence:

show sequence

AGAGCTGGAACGCTCGGCTATCGGACTGGGTGGCACCGGGCGCAGGCCGCTGCCCTTGAAGCGC
CGGCCTTGGCTGGAGCCCGTGGACCAGCGCCCACCCGGACGCCGGGGCGGGAGCGGGCGGTTCC
ATCGACCCTGAGGGTGGACCAAGGAGACTGAGGGTTCCACCCGTGGCATCACAATTACCTCCGC
GGCGGCGAGGCCAGAGAGGCATTTCCAAGGAGACGCGGGCGCACTGCCCCTCCCTTGCTTCCTC
CTCTTCCCTCCTTCCTCTCCTAGTTTCTTCCCTCCCTTCCCGCCCTACTCCTTCCCTCCCTTCC
CACCCTACTCCTTTCGGCTGCTCTGGTGCCCACCCCCAGTGCCTCGAGGTCGAGGAGAGCTCCT
CGGCCCCGCAGGACGGGGAGGATTCTGTACAGATGAGCATAACTTGTGACTGCAAGGAGCCTGA
CAAGTGCTGCTGGAGACACAAGCAGTGCACTGGGCACATCATCTACCCTTTCGCCTCTGACTGT
GTCCGCCACAGCCTGCACCTACACTCTGTCAACCACTGCAACTGTAATTCTAGCTTTGAATTGG
TGCTGCCAGCCCAGTCCCAGCTCTGCACACCTTGCTCTGCTCTAAGAGAAATGGGGAGGAGGTC
TGTTGGCCTGAGGCAGGCCCAGCGGAAGCCCACTGTCCCTCAGGCTTCTGGCTCTGGGTCCCTG
GGGGAGTGATGGGAGCCAGGCTGAGAGTCCCATGTGTGGCAGGCTGAAGGACTCTTCAGAGGAT
AGCAGCAGCTCCCGGGGCGCGGGCCCAACCTGCTCCCATGTCATCGAGTCCCCTTGCTTTGAGC
TCACACCGGAGGAGGAGCATGTGGAGCGATTCCGGTATGGCTGGTGCAAAAGCTACAGACCTGT
CTCTGTGGCAGTGATCCACCATCCACTCTACCATGAGTGTGGGGCAGATGATCTAAATGAAGAA
GAGGAAGAGGAGGAGGAGGAAAGCAAGCCCCCCATCCCGACACAGGTGGGGCCCGCCACCGCCT
CCCCTGACCTAGGCACCAGCATGGCCACTGGTACCCCTGACTCCACAGCGCCCATCACCATCTG
GCGCTCTGAGAGCCCCACAGGGAAGGGTCAGGGCAGCAAGGTGATCAAGAAGGTAAAGAAGAAA
AAGGAAAAAGAGAAAGACAAGGAGGAGATGGATGAGAAGGCAAAGCTGAAGAAAAAAGCCAAGA
AAGGCCAGTTGACTAAGAAGAAAAGCCCGGTTAAATTGGAGCCTTCCCCGCCAGACGTGAGCCG
ATCATTAAGCGCAAGACAGCTGGCCAGGATGTCCGAGTCCAGCCCAGAAAGCCGGGAAGAGCTG
GAGAGCGAGGACAGTTACAATGGCCGGGGGCAGGGAGAACTGTCCAGCGAGGATATTGTGGAAT
CATCATCGCCCAGGAAGAGAGAGAACACAGTCCAGGCCAAAAAGACAGGGGCAAAGCCCTCACA
AGCCAGGAAGGTAAACAAGAGAAAATCTCCCCCAGGATCAAACCCCAACCTCAGTTGAGGCCAG
GGTGGTCAGGGTGCAGAATAAATGCCATCGAGCCTGTGGCTGGCCCTCTGCTGCTGTTCTCTCC
CTCCAACCTGGCTGTTTCTTGCGGGGCAAGGGGTGGGCTCAGGGCTGCAGGGGTTTCTCAAAGG
CAATCCAGCTTTCACAAAGGAAGCCCATGGGAAGGCAGGTGGGAGGGAAAGGAAGGGGCACAGC
CCTATTTCTTCCTACCTGCTAGGACAAGGTGGAAGAGTGTATCTGGGGTGGGAAGGAGGGCTTC
CCCTCTCTGCTGCGAGAGACTGGTCTGTGTGAAATCCACTTCTGGGACAGGCAGTACTGTCTGC
AGCGATACCCCCAATAAACGGAACTTTTTAACCCA

hide sequence

RefSeq Acc Id:

NM_001366301 ⟹ NP_001353230

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	17	28,703,197 - 28,711,888 (-)	NCBI
T2T-CHM13v2.0	17	29,645,981 - 29,654,697 (-)	NCBI

Sequence:

show sequence

GGATGAAGAACGCGGCTGACGCTGAGACCCAGCTGGGAAGACTACGCAGCCTGGAGCCGGGCTG
GGGAGGCCGGCGGGGGCTGCGCCAGCATGAGGCGGGGTTAGGGGCTAGGCGGGGGCGAAGCCGA
GACTGGAGTTCACGGCTGGGCCGAGGGCTCGGCCGGGCTGAGGCTCAGGGTTGGACTTCACGCA
AGAGTCCTGTAGAGACGAAGACCTGGGCGGAGAGCGATGTGGGTCAGGACGACGCTCACAATTG
AAAGATGGACTAAGGAAAAGACCGAGCCCAAGGCCCGCTCGTGGGATGAGAGCAGATGCCGCGA
TGTAAACAGGTTACCCAGCTGGGAGAGAGGACATCTGCTGGCTGGTGTGGCGTCCAGCACTGAT
GTGTCTACCTTCTCTGAAGGTGACTGCAAGGAGCCTGACAAGTGCTGCTGGAGACACAAGCAGT
GCACTGGGCACATCATCTACCCTTTCGCCTCTGACTGTGTCCGCCACAGCCTGCACCTACACTC
TGTCAACCACTGCAACTGTAATTCTAGGCTGAAGGACTCTTCAGAGGATAGCAGCAGCTCCCGG
GGCGCGGGCCCAACCTGCTCCCATGTCATCGAGTCCCCTTGCTTTGAGCTCACACCGGAGGAGG
AGCATGTGGAGCGATTCCGGTATGGCTGGTGCAAAAGCTACAGACCTGTCTCTGTGGCAGTGAT
CCACCATCCACTCTACCATGAGTGTGGGGCAGATGATCTAAATGAAGAAGAGGAAGAGGAGGAG
GAGGAAAGCAAGCCCCCCATCCCGACACAGGTGGGGCCCGCCACCGCCTCCCCTGACCTAGGCA
CCAGCATGGCCACTGGTACCCCTGACTCCACAGCGCCCATCACCATCTGGCGCTCTGAGAGCCC
CACAGGGAAGGGTCAGGGCAGCAAGGTGATCAAGAAGGTAAAGAAGAAAAAGGAAAAAGAGAAA
GACAAGGAGGAGATGGATGAGAAGGCAAAGCTGAAGAAAAAAGCCAAGAAAGGCCAGTTGACTA
AGAAGAAAAGCCCGGTTAAATTGGAGCCTTCCCCGCCAGACGTGAGCCGATCATTAAGCGCAAG
ACAGCTGGCCAGGATGTCCGAGTCCAGCCCAGAAAGCCGGGAAGAGCTGGAGAGCGAGGACAGT
TACAATGGCCGGGGGCAGGGAGAACTGTCCAGCGAGGATATTGTGGAATCATCATCGCCCAGGA
AGAGAGAGAACACAGTCCAGGCCAAAAAGACAGGGGCAAAGCCCTCACAAGCCAGGAAGGTAAA
CAAGAGAAAATCTCCCCCAGGATCAAACCCCAACCTCAGTTGAGGCCAGGGTGGTCAGGGTGCA
GAATAAATGCCATCGAGCCTGTGGCTGGCCCTCTGCTGCTGTTCTCTCCCTCCAACCTGGCTGT
TTCTTGCGGGGCAAGGGGTGGGCTCAGGGCTGCAGGGGTTTCTCAAAGGCAATCCAGCTTTCAC
AAAGGAAGCCCATGGGAAGGCAGGTGGGAGGGAAAGGAAGGGGCACAGCCCTATTTCTTCCTAC
CTGCTAGGACAAGGTGGAAGAGTGTATCTGGGGTGGGAAGGAGGGCTTCCCCTCTCTGCTGCGA
GAGACTGGTCTGTGTGAAATCCACTTCTGGGACAGGCAGTACTGTCTGCAGCGATACCCCCAAT
AAACGGAACTTTTTAACCCA

hide sequence

RefSeq Acc Id:

NM_001366302 ⟹ NP_001353231

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	17	28,703,197 - 28,711,299 (-)	NCBI
T2T-CHM13v2.0	17	29,645,981 - 29,654,108 (-)	NCBI

Sequence:

show sequence

AGAGCTGGAACGCTCGGCTATCGGACTGGGTGGCACCGGGCGCAGGCCGCTGCCCTTGAAGCGC
CGGCCTTGGCTGGAGCCCGTGGACCAGCGCCCACCCGGACGCCGGGGCGGGAGCGGGCGGTTCC
ATCGACCCTGAGGGTGGACCAAGGAGACTGAGGGTTCCACCCGTGGCATCACAATTACCTCCGC
GGCGGCGAGGCCAGAGAGGCATTTCCAAGGAGACGCGGGCGCACTGCCCCTCCCTTGCTTCCTC
CTCTTCCCTCCTTCCTCTCCTAGTTTCTTCCCTCCCTTCCCGCCCTACTCCTTCCCTCCCTTCC
CACCCTACTCCTTTCGGCTGCTCTGGTGCCCACCCCCAGTGCCTCGAGGTCGAGGAGAGCTCCT
CGGCCCCGCAGGACGGGGAGGATTCTGTACAGATGAGCATAACTTGTGACTGCAAGGAGCCTGA
CAAGTGCTGCTGGAGACACAAGCAGTGCACTGGGCACATCATCTACCCTTTCGCCTCTGACTGT
GTCCGCCACAGCCTGCACCTACACTCTGTCAACCACTGCAACTGTAATTCTAGGCTGAAGGACT
CTTCAGAGGATAGCAGCAGCTCCCGGGGCGCGGGCCCAACCTGCTCCCATGTCATCGAGTCCCC
TTGCTTTGAGCTCACACCGGAGGAGGAGCATGTGGAGCGATTCCGGTATGGCTGGTGCAAAAGC
TACAGACCTGTCTCTGTGGCAGTGATCCACCATCCACTCTACCATGAGTGTGGGGCAGATGATC
TAAATGAAGAAGAGGAAGAGGAGGAGGAGGAAAGCAAGCCCCCCATCCCGACACAGGTGGGGCC
CGCCACCGCCTCCCCTGACCTAGGCACCAGCATGGCCACTGGTACCCCTGACTCCACAGCGCCC
ATCACCATCTGGCGCTCTGAGAGCCCCACAGGGAAGGGTCAGGGCAGCAAGGTGATCAAGAAGG
TAAAGAAGAAAAAGGAAAAAGAGAAAGACAAGGAGGAGATGGATGAGAAGGCAAAGCTGAAGAA
AAAAGCCAAGAAAGGCCAGTTGACTAAGAAGAAAAGCCCGGTTAAATTGGAGCCTTCCCCGCCA
GACGTGAGCCGATCATTAAGCGCAAGACAGCTGGCCAGGATGTCCGAGTCCAGCCCAGAAAGCC
GGGAAGAGCTGGAGAGCGAGGACAGTTACAATGGCCGGGGGCAGGGAGAACTGTCCAGCGAGGA
TATTGTGGAATCATCATCGCCCAGGAAGAGAGAGAACACAGTCCAGGCCAAAAAGACAGGGGCA
AAGCCCTCACAAGCCAGGAAGGTAAACAAGAGAAAATCTCCCCCAGGATCAAACCCCAACCTCA
GTTGAGGCCAGGGTGGTCAGGGTGCAGAATAAATGCCATCGAGCCTGTGGCTGGCCCTCTGCTG
CTGTTCTCTCCCTCCAACCTGGCTGTTTCTTGCGGGGCAAGGGGTGGGCTCAGGGCTGCAGGGG
TTTCTCAAAGGCAATCCAGCTTTCACAAAGGAAGCCCATGGGAAGGCAGGTGGGAGGGAAAGGA
AGGGGCACAGCCCTATTTCTTCCTACCTGCTAGGACAAGGTGGAAGAGTGTATCTGGGGTGGGA
AGGAGGGCTTCCCCTCTCTGCTGCGAGAGACTGGTCTGTGTGAAATCCACTTCTGGGACAGGCA
GTACTGTCTGCAGCGATACCCCCAATAAACGGAACTTTTTAACCCA

hide sequence

RefSeq Acc Id:

NM_001366303 ⟹ NP_001353232

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	17	28,703,197 - 28,710,104 (-)	NCBI
T2T-CHM13v2.0	17	29,645,981 - 29,652,889 (-)	NCBI

Sequence:

show sequence

GGCTGTGGAGTCCAGATTGAGTAAAACCAGAGGGTGAGGAATTGGTAGTGTTGGAGCTGAAAAG
CAGGTGCAGTAGGAAGTGACTGTGCCTCAAAAAAACACCTGTCCTTCCCGCCGTCTCACTCTGC
TGCCCACACTGGAGTGCAGTAGCACGATATCGGCTCACTGCAACCTACACTTCTGGGGTTCAAG
CGATTCTCATGCCTTGGCCTCCAGAGCAGCTGGGACTACAGGTGGCTGGAAGAGAAGAAAGAAG
TGAAGACACTGAGCTCACTGAAGGTGACTGCAAGGAGCCTGACAAGTGCTGCTGGAGACACAAG
CAGTGCACTGGGCACATCATCTACCCTTTCGCCTCTGACTGTGTCCGCCACAGCCTGCACCTAC
ACTCTGTCAACCACTGCAACTGTAATTCTAGCTTTGAATTGGTGCTGCCAGCCCAGTCCCAGCT
CTGCACACCTTGCTCTGCTCTAAGAGAAATGGGGAGGAGGTCTGTTGGCCTGAGGCAGGCCCAG
CGGAAGCCCACTGTCCCTCAGGCTTCTGGCTCTGGGTCCCTGGGGGAGTGATGGGAGCCAGGCT
GAGAGTCCCATGTGTGGCAGGCTGAAGGACTCTTCAGAGGATAGCAGCAGCTCCCGGGGCGCGG
GCCCAACCTGCTCCCATGTCATCGAGTCCCCTTGCTTTGAGCTCACACCGGAGGAGGAGCATGT
GGAGCGATTCCGGTATGGCTGGTGCAAAAGCTACAGACCTGTCTCTGTGGCAGTGATCCACCAT
CCACTCTACCATGAGTGTGGGGCAGATGATCTAAATGAAGAAGAGGAAGAGGAGGAGGAGGAAA
GCAAGCCCCCCATCCCGACACAGGTGGGGCCCGCCACCGCCTCCCCTGACCTAGGCACCAGCAT
GGCCACTGGTACCCCTGACTCCACAGCGCCCATCACCATCTGGCGCTCTGAGAGCCCCACAGGG
AAGGGTCAGGGCAGCAAGGTGATCAAGAAGGTAAAGAAGAAAAAGGAAAAAGAGAAAGACAAGG
AGGAGATGGATGAGAAGGCAAAGCTGAAGAAAAAAGCCAAGAAAGGCCAGTTGACTAAGAAGAA
AAGCCCGGTTAAATTGGAGCCTTCCCCGCCAGACGTGAGCCGATCATTAAGCGCAAGACAGCTG
GCCAGGATGTCCGAGTCCAGCCCAGAAAGCCGGGAAGAGCTGGAGAGCGAGGACAGTTACAATG
GCCGGGGGCAGGGAGAACTGTCCAGCGAGGATATTGTGGAATCATCATCGCCCAGGAAGAGAGA
GAACACAGTCCAGGCCAAAAAGACAGGGGCAAAGCCCTCACAAGCCAGGAAGGTAAACAAGAGA
AAATCTCCCCCAGGATCAAACCCCAACCTCAGTTGAGGCCAGGGTGGTCAGGGTGCAGAATAAA
TGCCATCGAGCCTGTGGCTGGCCCTCTGCTGCTGTTCTCTCCCTCCAACCTGGCTGTTTCTTGC
GGGGCAAGGGGTGGGCTCAGGGCTGCAGGGGTTTCTCAAAGGCAATCCAGCTTTCACAAAGGAA
GCCCATGGGAAGGCAGGTGGGAGGGAAAGGAAGGGGCACAGCCCTATTTCTTCCTACCTGCTAG
GACAAGGTGGAAGAGTGTATCTGGGGTGGGAAGGAGGGCTTCCCCTCTCTGCTGCGAGAGACTG
GTCTGTGTGAAATCCACTTCTGGGACAGGCAGTACTGTCTGCAGCGATACCCCCAATAAACGGA
ACTTTTTAACCCA

hide sequence

RefSeq Acc Id:

NM_152465 ⟹ NP_689678

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	17	28,703,197 - 28,711,888 (-)	NCBI
GRCh37	17	27,030,214 - 27,039,127 (-)	NCBI
Build 36	17	24,054,661 - 24,062,999 (-)	NCBI Archive
Celera	17	23,889,570 - 23,898,038 (-)	RGD
HuRef	17	23,239,164 - 23,247,772 (-)	ENTREZGENE
CHM1_1	17	27,092,687 - 27,101,397 (-)	NCBI
T2T-CHM13v2.0	17	29,645,981 - 29,654,697 (-)	NCBI

Sequence:

show sequence

GGATGAAGAACGCGGCTGACGCTGAGACCCAGCTGGGAAGACTACGCAGCCTGGAGCCGGGCTG
GGGAGGCCGGCGGGGGCTGCGCCAGCATGAGGCGGGGTTAGGGGCTAGGCGGGGGCGAAGCCGA
GACTGGAGTTCACGGCTGGGCCGAGGGCTCGGCCGGGCTGAGGCTCAGGGTTGGACTTCACGCA
AGAGTCCTGTAGAGACGAAGACCTGGGCGGAGAGCGATGTGGGTCAGGACGACGCTCACAATTG
AAAGATGGACTAAGGAAAAGACCGAGCCCAAGGCCCGCTCGTGGGATGAGAGCAGATGCCGCGG
TGACTGCAAGGAGCCTGACAAGTGCTGCTGGAGACACAAGCAGTGCACTGGGCACATCATCTAC
CCTTTCGCCTCTGACTGTGTCCGCCACAGCCTGCACCTACACTCTGTCAACCACTGCAACTGTA
ATTCTAGGCTGAAGGACTCTTCAGAGGATAGCAGCAGCTCCCGGGGCGCGGGCCCAACCTGCTC
CCATGTCATCGAGTCCCCTTGCTTTGAGCTCACACCGGAGGAGGAGCATGTGGAGCGATTCCGG
TATGGCTGGTGCAAAAGCTACAGACCTGTCTCTGTGGCAGTGATCCACCATCCACTCTACCATG
AGTGTGGGGCAGATGATCTAAATGAAGAAGAGGAAGAGGAGGAGGAGGAAAGCAAGCCCCCCAT
CCCGACACAGGTGGGGCCCGCCACCGCCTCCCCTGACCTAGGCACCAGCATGGCCACTGGTACC
CCTGACTCCACAGCGCCCATCACCATCTGGCGCTCTGAGAGCCCCACAGGGAAGGGTCAGGGCA
GCAAGGTGATCAAGAAGGTAAAGAAGAAAAAGGAAAAAGAGAAAGACAAGGAGGAGATGGATGA
GAAGGCAAAGCTGAAGAAAAAAGCCAAGAAAGGCCAGTTGACTAAGAAGAAAAGCCCGGTTAAA
TTGGAGCCTTCCCCGCCAGACGTGAGCCGATCATTAAGCGCAAGACAGCTGGCCAGGATGTCCG
AGTCCAGCCCAGAAAGCCGGGAAGAGCTGGAGAGCGAGGACAGTTACAATGGCCGGGGGCAGGG
AGAACTGTCCAGCGAGGATATTGTGGAATCATCATCGCCCAGGAAGAGAGAGAACACAGTCCAG
GCCAAAAAGACAGGGGCAAAGCCCTCACAAGCCAGGAAGGTAAACAAGAGAAAATCTCCCCCAG
GATCAAACCCCAACCTCAGTTGAGGCCAGGGTGGTCAGGGTGCAGAATAAATGCCATCGAGCCT
GTGGCTGGCCCTCTGCTGCTGTTCTCTCCCTCCAACCTGGCTGTTTCTTGCGGGGCAAGGGGTG
GGCTCAGGGCTGCAGGGGTTTCTCAAAGGCAATCCAGCTTTCACAAAGGAAGCCCATGGGAAGG
CAGGTGGGAGGGAAAGGAAGGGGCACAGCCCTATTTCTTCCTACCTGCTAGGACAAGGTGGAAG
AGTGTATCTGGGGTGGGAAGGAGGGCTTCCCCTCTCTGCTGCGAGAGACTGGTCTGTGTGAAAT
CCACTTCTGGGACAGGCAGTACTGTCTGCAGCGATACCCCCAATAAACGGAACTTTTTAACCCA

hide sequence

RefSeq Acc Id:

XM_006721723 ⟹ XP_006721786

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	17	28,703,197 - 28,711,888 (-)	NCBI

Sequence:

show sequence

AAGAATGGGGCTGGGGGCAAGGCTCGTTGTAACACTAAGAATTGGGGCTACGATCTGGAGGCAG
GGTGAAAATCTGGGGTTTGGACTGCAAGCTGGAACCAGAGATGGGTGGTGAGAGCTGGGCCTGT
AAGGTTAAGGTCTGAGATAAAGAGGGGCCTGGGAGGCGCCGGAGGCCCCGGATGAAGAACGCGG
CTGACGCTGAGACCCAGCTGGGAAGACTACGCAGCCTGGAGCCGGGCTGGGGAGGCCGGCGGGG
GCTGCGCCAGCATGAGGCGGGGTTAGGGGCTAGGCGGGGGCGAAGCCGAGACTGGAGTTCACGG
CTGGGCCGAGGGCTCGGCCGGGCTGAGGCTCAGGGTTGGACTTCACGCAAGAGTCCTGTAGAGA
CGAAGACCTGGGCGGAGAGCGATGTGGGTCAGGACGACGCTCACAATTGAAAGATGGACTAAGG
AAAAGACCGAGCCCAAGGCCCGCTCGTGGGATGAGAGCAGATGCCGCGATGTAAACAGGTTACC
CAGCTGGGAGAGAGGACATCTGCTGGCTGGTGTGGCGTCCAGCACTGATGTGTCTACCTTCTCT
GAAGGTGACTGCAAGGAGCCTGACAAGTGCTGCTGGAGACACAAGCAGTGCACTGGGCACATCA
TCTACCCTTTCGCCTCTGACTGTGTCCGCCACAGCCTGCACCTACACTCTGTCAACCACTGCAA
CTGTAATTCTAGGCTGAAGGACTCTTCAGAGGATAGCAGCAGCTCCCGGGGCGCGGGCCCAACC
TGCTCCCATGTCATCGAGTCCCCTTGCTTTGAGCTCACACCGGAGGAGGAGCATGTGGAGCGAT
TCCGGTGCAAAAGCTACAGACCTGTCTCTGTGGCAGTGATCCACCATCCACTCTACCATGAGTG
TGGGGCAGATGATCTAAATGAAGAAGAGGAAGAGGAGGAGGAGGAAAGCAAGCCCCCCATCCCG
ACACAGGTGGGGCCCGCCACCGCCTCCCCTGACCTAGGCACCAGCATGGCCACTGGTACCCCTG
ACTCCACAGCGCCCATCACCATCTGGCGCTCTGAGAGCCCCACAGGGAAGGGTCAGGGCAGCAA
GGTGATCAAGAAGGTAAAGAAGAAAAAGGAAAAAGAGAAAGACAAGGAGGAGATGGATGAGAAG
GCAAAGCTGAAGAAAAAAGCCAAGAAAGGCCAGTTGACTAAGAAGAAAAGCCCGGTTAAATTGG
AGCCTTCCCCGCCAGACGTGAGCCGATCATTAAGCGCAAGACAGCTGGCCAGGATGTCCGAGTC
CAGCCCAGAAAGCCGGGAAGAGCTGGAGAGCGAGGACAGTTACAATGGCCGGGGGCAGGGAGAA
CTGTCCAGCGAGGATATTGTGGAATCATCATCGCCCAGGAAGAGAGAGAACACAGTCCAGGCCA
AAAAGACAGGGGCAAAGCCCTCACAAGCCAGGAAGGTAAACAAGAGAAAATCTCCCCCAGGATC
AAACCCCAACCTCAGTTGAGGCCAGGGTGGTCAGGGTGCAGAATAAATGCCATCGAGCCTGTGG
CTGGCCCTCTGCTGCTGTTCTCTCCCTCCAACCTGGCTGTTTCTTGCGGGGCAAGGGGTGGGCT
CAGGGCTGCAGGGGTTTCTCAAAGGCAATCCAGCTTTCACAAAGGAAGCCCATGGGAAGGCAGG
TGGGAGGGAAAGGAAGGGGCACAGCCCTATTTCTTCCTACCTGCTAGGACAAGGTGGAAGAGTG
TATCTGGGGTGGGAAGGAGGGCTTCCCCTCTCTGCTGCGAGAGACTGGTCTGTGTGAAATCCAC
TTCTGGGACAGGCAGTACTGTCTGCAGCGATACCCCCAATAAACGGAACTTTTTAACCCA

hide sequence

RefSeq Acc Id:

XM_047435473 ⟹ XP_047291429

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	17	28,703,197 - 28,711,299 (-)	NCBI

RefSeq Acc Id:

XM_047435474 ⟹ XP_047291430

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	17	28,703,197 - 28,711,299 (-)	NCBI

RefSeq Acc Id:

XM_047435475 ⟹ XP_047291431

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	17	28,703,197 - 28,711,299 (-)	NCBI

RefSeq Acc Id:

XM_047435476 ⟹ XP_047291432

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	17	28,703,197 - 28,711,299 (-)	NCBI

RefSeq Acc Id:

XM_047435477 ⟹ XP_047291433

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	17	28,703,197 - 28,711,888 (-)	NCBI

RefSeq Acc Id:

XM_054315227 ⟹ XP_054171202

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
T2T-CHM13v2.0	17	29,645,981 - 29,654,697 (-)	NCBI

RefSeq Acc Id:

XM_054315228 ⟹ XP_054171203

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
T2T-CHM13v2.0	17	29,645,981 - 29,654,108 (-)	NCBI

RefSeq Acc Id:

XM_054315229 ⟹ XP_054171204

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
T2T-CHM13v2.0	17	29,645,981 - 29,654,108 (-)	NCBI

RefSeq Acc Id:

XM_054315230 ⟹ XP_054171205

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
T2T-CHM13v2.0	17	29,645,981 - 29,654,108 (-)	NCBI

RefSeq Acc Id:

XM_054315231 ⟹ XP_054171206

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
T2T-CHM13v2.0	17	29,645,981 - 29,654,108 (-)	NCBI

RefSeq Acc Id:

XM_054315232 ⟹ XP_054171207

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
T2T-CHM13v2.0	17	29,645,981 - 29,654,697 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001291878	(Get FASTA)	NCBI Sequence Viewer
	NP_001291880	(Get FASTA)	NCBI Sequence Viewer
	NP_001291881	(Get FASTA)	NCBI Sequence Viewer
	NP_001291882	(Get FASTA)	NCBI Sequence Viewer
	NP_001291883	(Get FASTA)	NCBI Sequence Viewer
	NP_001353230	(Get FASTA)	NCBI Sequence Viewer
	NP_001353231	(Get FASTA)	NCBI Sequence Viewer
	NP_001353232	(Get FASTA)	NCBI Sequence Viewer
	NP_689678	(Get FASTA)	NCBI Sequence Viewer
	XP_006721786	(Get FASTA)	NCBI Sequence Viewer
	XP_047291429	(Get FASTA)	NCBI Sequence Viewer
	XP_047291430	(Get FASTA)	NCBI Sequence Viewer
	XP_047291431	(Get FASTA)	NCBI Sequence Viewer
	XP_047291432	(Get FASTA)	NCBI Sequence Viewer
	XP_047291433	(Get FASTA)	NCBI Sequence Viewer
	XP_054171202	(Get FASTA)	NCBI Sequence Viewer
	XP_054171203	(Get FASTA)	NCBI Sequence Viewer
	XP_054171204	(Get FASTA)	NCBI Sequence Viewer
	XP_054171205	(Get FASTA)	NCBI Sequence Viewer
	XP_054171206	(Get FASTA)	NCBI Sequence Viewer
	XP_054171207	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH29574	(Get FASTA)	NCBI Sequence Viewer
	AAT09159	(Get FASTA)	NCBI Sequence Viewer
	BAG63307	(Get FASTA)	NCBI Sequence Viewer
	EAW51125	(Get FASTA)	NCBI Sequence Viewer
	EAW51126	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSP00000301039
	ENSP00000301039.2
	ENSP00000463898.1
	ENSP00000464600.1
	ENSP00000468747.1
	ENSP00000507242
	ENSP00000507242.1
GenBank Protein	Q8NCQ7	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_689678 ⟸ NM_152465
- Peptide Label:	isoform b
- UniProtKB:	Q6PKN3 (UniProtKB/Swiss-Prot), G5E9R8 (UniProtKB/Swiss-Prot), B4DX95 (UniProtKB/Swiss-Prot), Q8NCQ7 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MWVRTTLTIERWTKEKTEPKARSWDESRCRGDCKEPDKCCWRHKQCTGHIIYPFASDCVRHSLH LHSVNHCNCNSRLKDSSEDSSSSRGAGPTCSHVIESPCFELTPEEEHVERFRYGWCKSYRPVSV AVIHHPLYHECGADDLNEEEEEEEEESKPPIPTQVGPATASPDLGTSMATGTPDSTAPITIWRS ESPTGKGQGSKVIKKVKKKKEKEKDKEEMDEKAKLKKKAKKGQLTKKKSPVKLEPSPPDVSRSL SARQLARMSESSPESREELESEDSYNGRGQGELSSEDIVESSSPRKRENTVQAKKTGAKPSQAR KVNKRKSPPGSNPNLS hide sequence

RefSeq Acc Id:	XP_006721786 ⟸ XM_006721723
- Peptide Label:	isoform X1
- UniProtKB:	Q8NCQ7 (UniProtKB/Swiss-Prot), Q6PKN3 (UniProtKB/Swiss-Prot), G5E9R8 (UniProtKB/Swiss-Prot), B4DX95 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MWVRTTLTIERWTKEKTEPKARSWDESRCRDVNRLPSWERGHLLAGVASSTDVSTFSEGDCKEP DKCCWRHKQCTGHIIYPFASDCVRHSLHLHSVNHCNCNSRLKDSSEDSSSSRGAGPTCSHVIES PCFELTPEEEHVERFRCKSYRPVSVAVIHHPLYHECGADDLNEEEEEEEEESKPPIPTQVGPAT ASPDLGTSMATGTPDSTAPITIWRSESPTGKGQGSKVIKKVKKKKEKEKDKEEMDEKAKLKKKA KKGQLTKKKSPVKLEPSPPDVSRSLSARQLARMSESSPESREELESEDSYNGRGQGELSSEDIV ESSSPRKRENTVQAKKTGAKPSQARKVNKRKSPPGSNPNLS hide sequence

RefSeq Acc Id:	NP_001291880 ⟸ NM_001304951
- Peptide Label:	isoform c
- UniProtKB:	Q8NCQ7 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MPRCKSYRPVSVAVIHHPLYHECGADDLNEEEEEEEEESKPPIPTQVGPATASPDLGTSMATGT PDSTAPITIWRSESPTGKGQGSKVIKKVKKKKEKEKDKEEMDEKAKLKKKAKKGQLTKKKSPVK LEPSPPDVSRSLSARQLARMSESSPESREELESEDSYNGRGQGELSSEDIVESSSPRKRENTVQ AKKTGAKPSQARKVNKRKSPPGSNPNLS hide sequence

RefSeq Acc Id:	NP_001291882 ⟸ NM_001304953
- Peptide Label:	isoform e
- UniProtKB:	Q8NCQ7 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MCGRLKDSSEDSSSSRGAGPTCSHVIESPCFELTPEEEHVERFRYGWCKSYRPVSVAVIHHPLY HECGADDLNEEEEEEEEESKPPIPTQVGPATASPDLGTSMATGTPDSTAPITIWRSESPTGKGQ GSKVIKKVKKKKEKEKDKEEMDEKAKLKKKAKKGQLTKKKSPVKLEPSPPDVSRSLSARQLARM SESSPESREELESEDSYNGRGQGELSSEDIVESSSPRKRENTVQAKKTGAKPSQARKVNKRKSP PGSNPNLS hide sequence

RefSeq Acc Id:	NP_001291878 ⟸ NM_001304949
- Peptide Label:	isoform a
- UniProtKB:	Q6PKN3 (UniProtKB/Swiss-Prot), G5E9R8 (UniProtKB/Swiss-Prot), B4DX95 (UniProtKB/Swiss-Prot), Q8NCQ7 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MRADAAVAGREERSEDTELTEGDCKEPDKCCWRHKQCTGHIIYPFASDCVRHSLHLHSVNHCNC NSRLKDSSEDSSSSRGAGPTCSHVIESPCFELTPEEEHVERFRYGWCKSYRPVSVAVIHHPLYH ECGADDLNEEEEEEEEESKPPIPTQVGPATASPDLGTSMATGTPDSTAPITIWRSESPTGKGQG SKVIKKVKKKKEKEKDKEEMDEKAKLKKKAKKGQLTKKKSPVKLEPSPPDVSRSLSARQLARMS ESSPESREELESEDSYNGRGQGELSSEDIVESSSPRKRENTVQAKKTGAKPSQARKVNKRKSPP GSNPNLS hide sequence

RefSeq Acc Id:	NP_001291883 ⟸ NM_001304954
- Peptide Label:	isoform e
- UniProtKB:	Q8NCQ7 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MCGRLKDSSEDSSSSRGAGPTCSHVIESPCFELTPEEEHVERFRYGWCKSYRPVSVAVIHHPLY HECGADDLNEEEEEEEEESKPPIPTQVGPATASPDLGTSMATGTPDSTAPITIWRSESPTGKGQ GSKVIKKVKKKKEKEKDKEEMDEKAKLKKKAKKGQLTKKKSPVKLEPSPPDVSRSLSARQLARM SESSPESREELESEDSYNGRGQGELSSEDIVESSSPRKRENTVQAKKTGAKPSQARKVNKRKSP PGSNPNLS hide sequence

RefSeq Acc Id:	NP_001291881 ⟸ NM_001304952
- Peptide Label:	isoform d
- UniProtKB:	Q6PKN3 (UniProtKB/Swiss-Prot), G5E9R8 (UniProtKB/Swiss-Prot), B4DX95 (UniProtKB/Swiss-Prot), Q8NCQ7 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MSITYVNRLPSWERGHLLAGVASSTDVSTFSEGDCKEPDKCCWRHKQCTGHIIYPFASDCVRHS LHLHSVNHCNCNSRLKDSSEDSSSSRGAGPTCSHVIESPCFELTPEEEHVERFRYGWCKSYRPV SVAVIHHPLYHECGADDLNEEEEEEEEESKPPIPTQVGPATASPDLGTSMATGTPDSTAPITIW RSESPTGKGQGSKVIKKVKKKKEKEKDKEEMDEKAKLKKKAKKGQLTKKKSPVKLEPSPPDVSR SLSARQLARMSESSPESREELESEDSYNGRGQGELSSEDIVESSSPRKRENTVQAKKTGAKPSQ ARKVNKRKSPPGSNPNLS hide sequence

RefSeq Acc Id:	NP_001353230 ⟸ NM_001366301
- Peptide Label:	isoform f
- UniProtKB:	Q8NCQ7 (UniProtKB/Swiss-Prot), Q6PKN3 (UniProtKB/Swiss-Prot), G5E9R8 (UniProtKB/Swiss-Prot), B4DX95 (UniProtKB/Swiss-Prot), A0A804HIV4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	NP_001353231 ⟸ NM_001366302
- Peptide Label:	isoform g
- UniProtKB:	Q8NCQ7 (UniProtKB/Swiss-Prot), Q6PKN3 (UniProtKB/Swiss-Prot), G5E9R8 (UniProtKB/Swiss-Prot), B4DX95 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	NP_001353232 ⟸ NM_001366303
- Peptide Label:	isoform e

RefSeq Acc Id:

ENSP00000464600 ⟸ ENST00000581289

RefSeq Acc Id:

ENSP00000411400 ⟸ ENST00000439862

RefSeq Acc Id:

ENSP00000468747 ⟸ ENST00000415329

RefSeq Acc Id:

ENSP00000301039 ⟸ ENST00000301039

RefSeq Acc Id:

ENSP00000463898 ⟸ ENST00000473751

RefSeq Acc Id:

ENSP00000507242 ⟸ ENST00000682792

RefSeq Acc Id:	XP_047291433 ⟸ XM_047435477
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_047291432 ⟸ XM_047435476
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_047291429 ⟸ XM_047435473
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_047291431 ⟸ XM_047435475
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_047291430 ⟸ XM_047435474
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_054171207 ⟸ XM_054315232
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_054171202 ⟸ XM_054315227
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_054171206 ⟸ XM_054315231
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_054171203 ⟸ XM_054315228
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_054171205 ⟸ XM_054315230
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_054171204 ⟸ XM_054315229
- Peptide Label:	isoform X2

Protein Domains

Phospholipase A2

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q8NCQ7-F1-model_v2	AlphaFold	Q8NCQ7	1-364	view protein structure

Promoters

RGD ID:

7234417

Promoter ID:

EPDNEW_H22954

Type:

initiation region

Name:

PROCA1_1

Description:

protein interacting with cyclin A1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_H22955 EPDNEW_H22956

Experiment Methods:

Single-end sequencing.

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	17	28,711,299 - 28,711,359	EPDNEW

RGD ID:

7234419

Promoter ID:

EPDNEW_H22955

Type:

initiation region

Name:

PROCA1_3

Description:

protein interacting with cyclin A1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_H22954 EPDNEW_H22956

Experiment Methods:

Single-end sequencing.

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	17	28,711,871 - 28,711,931	EPDNEW

RGD ID:

7234421

Promoter ID:

EPDNEW_H22956

Type:

initiation region

Name:

PROCA1_2

Description:

protein interacting with cyclin A1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_H22954 EPDNEW_H22955

Experiment Methods:

Single-end sequencing.; Paired-end sequencing.

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	17	28,712,320 - 28,712,380	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	HGNC:28600	AgrOrtholog
COSMIC	PROCA1	COSMIC
Ensembl Genes	ENSG00000167525	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript	ENST00000301039	ENTREZGENE
	ENST00000301039.6	UniProtKB/Swiss-Prot
	ENST00000415329.7	UniProtKB/TrEMBL
	ENST00000473751.1	UniProtKB/TrEMBL
	ENST00000581289.1	UniProtKB/TrEMBL
	ENST00000674362	ENTREZGENE
	ENST00000682792	ENTREZGENE
	ENST00000682792.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.90.10	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx	ENSG00000167525	GTEx
HGNC ID	HGNC:28600	ENTREZGENE
Human Proteome Map	PROCA1	Human Proteome Map
InterPro	PLipase_A2_dom	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PLipase_A2_dom_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	hsa:147011	UniProtKB/Swiss-Prot
NCBI Gene	147011	ENTREZGENE
OMIM	617376	OMIM
PANTHER	PROTEIN PROCA1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	RH14732P	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	Phospholip_A2_2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB	PA165432492	PharmGKB
Superfamily-SCOP	SSF48619	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A804HIV4	ENTREZGENE, UniProtKB/TrEMBL
	B4DX95	ENTREZGENE
	G5E9R8	ENTREZGENE
	J3QQU2_HUMAN	UniProtKB/TrEMBL
	J3QSA8_HUMAN	UniProtKB/TrEMBL
	K7ESJ9_HUMAN	UniProtKB/TrEMBL
	PRCA1_HUMAN	UniProtKB/Swiss-Prot
	Q6PKN3	ENTREZGENE
	Q8NCQ7	ENTREZGENE
UniProt Secondary	B4DX95	UniProtKB/Swiss-Prot
	G5E9R8	UniProtKB/Swiss-Prot
	Q6PKN3	UniProtKB/Swiss-Prot

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar