CCT6P1 (chaperonin containing TCP1 subunit 6 pseudogene 1)

Gene: CCT6P1 (chaperonin containing TCP1 subunit 6 pseudogene 1) Homo sapiens

Analyze

Symbol:

CCT6P1

Name:

chaperonin containing TCP1 subunit 6 pseudogene 1

RGD ID:

1601895

HGNC Page

HGNC:33094

Description:

INTERACTS WITH 2,2',4,4'-Tetrabromodiphenyl ether; acrylamide; aflatoxin B1

Type:

pseudo (Ensembl: transcribed_unprocessed_pseudogene)

RefSeq Status:

PROVISIONAL

Previously known as:

CCT6-5P; CCT6AP1; DKFZp779B0634

Related Functional Gene:

CCT6A

Latest Assembly:

GRCh38 - Human Genome Assembly GRCh38

Position:

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	65,751,105 - 65,763,675 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	65,751,142 - 65,763,336 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	7	65,216,092 - 65,228,662 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	64,853,527 - 64,866,097 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	7	58,331,511 - 58,342,159 (+)	NCBI		Celera
Cytogenetic Map	7	q11.21	NCBI
HuRef	7	61,405,038 - 61,425,900 (+)	NCBI		HuRef
CHM1_1	7	65,311,393 - 65,323,958 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	7	66,973,233 - 66,985,797 (+)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	64,553,612 - 64,566,182 (+)	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

2,2',4,4'-Tetrabromodiphenyl ether (EXP)

acrylamide (EXP)

aflatoxin B1 (EXP)

benzo[a]pyrene (EXP)

sodium arsenite (EXP)

sunitinib (EXP)

zoledronic acid (EXP)

References

References - curated

#	Reference Title	Reference Citation
1.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:9847074	PMID:12477932	PMID:14702039	PMID:19156129	PMID:20193073

Genomics

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	247
Count of miRNA genes:	88
Interacting mature miRNAs:	88
Transcripts:	ENST00000434500, ENST00000442266, ENST00000443108
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region

G62070

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	7	65,228,294 - 65,228,488	UniSTS	GRCh37
GRCh37	7	56,130,734 - 56,130,928	UniSTS	GRCh37
Build 36	7	56,098,228 - 56,098,422	RGD	NCBI36
Celera	7	67,184,133 - 67,184,327	RGD
Cytogenetic Map	7	q11.21	UniSTS
Cytogenetic Map	7	p11.2	UniSTS
Cytogenetic Map	7	q11.1	UniSTS
HuRef	7	60,913,275 - 60,913,469	UniSTS
HuRef	7	55,944,517 - 55,944,711	UniSTS
CRA_TCAGchr7v2	7	56,134,981 - 56,135,175	UniSTS
CRA_TCAGchr7v2	7	64,565,814 - 64,566,008	UniSTS

GDB:1317576

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	7	65,224,090 - 65,224,165	UniSTS	GRCh37
GRCh37	7	64,529,967 - 64,530,042	UniSTS	GRCh37
Build 36	7	64,167,402 - 64,167,477	RGD	NCBI36
Celera	7	58,248,911 - 58,248,986	RGD
Celera	7	58,339,510 - 58,339,585	UniSTS
Cytogenetic Map	7	q11.21	UniSTS
HuRef	7	60,909,068 - 60,909,143	UniSTS
CRA_TCAGchr7v2	7	64,561,610 - 64,561,685	UniSTS
CRA_TCAGchr7v2	7	63,867,561 - 63,867,636	UniSTS

G23512

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	7	65,229,050 - 65,229,199	UniSTS	GRCh37
GRCh37	7	64,534,932 - 64,535,081	UniSTS	GRCh37
Build 36	7	64,172,367 - 64,172,516	RGD	NCBI36
Cytogenetic Map	7	q11.21	UniSTS
HuRef	7	60,914,031 - 60,914,180	UniSTS
CRA_TCAGchr7v2	7	63,872,526 - 63,872,675	UniSTS
CRA_TCAGchr7v2	7	64,566,570 - 64,566,719	UniSTS

D11S2921

Human Assembly	Chr	Position (strand)	Source
Cytogenetic Map	16	q22.1	UniSTS
Cytogenetic Map	1	p36.1	UniSTS
Cytogenetic Map	3	p24.2	UniSTS
Cytogenetic Map	1	q23.3	UniSTS
Cytogenetic Map	9	q34.3	UniSTS
Cytogenetic Map	1	p36.31	UniSTS
Cytogenetic Map	3	p25.3	UniSTS
Cytogenetic Map	11	p15.4	UniSTS
Cytogenetic Map	7	p14.1	UniSTS
Cytogenetic Map	2	q22.3	UniSTS
Cytogenetic Map	9	q22.33	UniSTS
Cytogenetic Map	15	q13.2	UniSTS
Cytogenetic Map	16	q24.3	UniSTS
Cytogenetic Map	5	q31	UniSTS
Cytogenetic Map	19	q13.11	UniSTS
Cytogenetic Map	17	p11.2	UniSTS
Cytogenetic Map	19	q13.3	UniSTS
Cytogenetic Map	22	q13.33	UniSTS
Cytogenetic Map	14	q13.2	UniSTS
Cytogenetic Map	2	p25.1	UniSTS
Cytogenetic Map	10	q24.33	UniSTS
Cytogenetic Map	5	q23.3-q31.1	UniSTS
Cytogenetic Map	8	p21.3	UniSTS
Cytogenetic Map	22	q13.1	UniSTS
Cytogenetic Map	1	p32.3	UniSTS
Cytogenetic Map	17	q11	UniSTS
Cytogenetic Map	1	q24	UniSTS
Cytogenetic Map	11	q14	UniSTS
Cytogenetic Map	17	q25	UniSTS
Cytogenetic Map	X	q13.1	UniSTS
Cytogenetic Map	2	q11.2	UniSTS
Cytogenetic Map	9	p13.3	UniSTS
Cytogenetic Map	19	p13.2	UniSTS
Cytogenetic Map	2	q32.3	UniSTS
Cytogenetic Map	17	q21.31	UniSTS
Cytogenetic Map	19	q13.12	UniSTS
Cytogenetic Map	4	q32.1	UniSTS
Cytogenetic Map	7	q34	UniSTS
Cytogenetic Map	13	q12	UniSTS
Cytogenetic Map	12	p13.31	UniSTS
Cytogenetic Map	3	p21.1	UniSTS
Cytogenetic Map	3	q12.3	UniSTS
Cytogenetic Map	14	q24.3	UniSTS
Cytogenetic Map	6	q22	UniSTS
Cytogenetic Map	22	q13.2	UniSTS
Cytogenetic Map	19	q13.42	UniSTS
Cytogenetic Map	17	q12	UniSTS
Cytogenetic Map	20	q11	UniSTS
Cytogenetic Map	8	q22.1	UniSTS
Cytogenetic Map	5	q23.3	UniSTS
Cytogenetic Map	20	q11.22	UniSTS
Cytogenetic Map	1	p36.11	UniSTS
Cytogenetic Map	19	q13.43	UniSTS
Cytogenetic Map	17	q21	UniSTS
Cytogenetic Map	11	q25	UniSTS
Cytogenetic Map	3	p21.3	UniSTS
Cytogenetic Map	1	q32.3	UniSTS
Cytogenetic Map	2	q37.3	UniSTS
Cytogenetic Map	12	q21.33	UniSTS
Cytogenetic Map	7	p22.3	UniSTS
Cytogenetic Map	4	p16.3	UniSTS
Cytogenetic Map	17	p13.3	UniSTS
Cytogenetic Map	1	p35.1	UniSTS
Cytogenetic Map	X	p11.4-p11.3	UniSTS
Cytogenetic Map	17	q11.2	UniSTS
Cytogenetic Map	1	p36.33	UniSTS
Cytogenetic Map	19	p13.3	UniSTS
Cytogenetic Map	1	q24.1	UniSTS
Cytogenetic Map	14	q11.2	UniSTS
Cytogenetic Map	16	p11.2	UniSTS
Cytogenetic Map	11	q24.2	UniSTS
Cytogenetic Map	10	p15.1	UniSTS
Cytogenetic Map	18	p11.31	UniSTS
Cytogenetic Map	12	p13.32	UniSTS
Cytogenetic Map	19	p13.11	UniSTS
Cytogenetic Map	11	q13.5	UniSTS
Cytogenetic Map	1	p22	UniSTS
Cytogenetic Map	2	q14	UniSTS
Cytogenetic Map	16	q24	UniSTS
Cytogenetic Map	16	p13.3	UniSTS
Cytogenetic Map	7	p22	UniSTS
Cytogenetic Map	14	q32.33	UniSTS
Cytogenetic Map	8	p11.21	UniSTS
Cytogenetic Map	8	q24.11	UniSTS
Cytogenetic Map	4	q12	UniSTS
Cytogenetic Map	9	q22.31	UniSTS
Cytogenetic Map	17	p13.2	UniSTS
Cytogenetic Map	11	p15.5	UniSTS
Cytogenetic Map	2	p11.2	UniSTS
Cytogenetic Map	7	q11.23	UniSTS
Cytogenetic Map	5	q31.1	UniSTS
Cytogenetic Map	2	q33-q34	UniSTS
Cytogenetic Map	17	q22.2	UniSTS
Cytogenetic Map	8	q24.13	UniSTS
Cytogenetic Map	22	q11.2	UniSTS
Cytogenetic Map	6	p22.1	UniSTS
Cytogenetic Map	Y	p11.2	UniSTS
Cytogenetic Map	19	q13.2	UniSTS
Cytogenetic Map	18	p11.21	UniSTS
Cytogenetic Map	10	q22	UniSTS
Cytogenetic Map	5	q35.3	UniSTS
Cytogenetic Map	10	q23.1	UniSTS
Cytogenetic Map	2	q37	UniSTS
Cytogenetic Map	18	pter-p11.3	UniSTS
Cytogenetic Map	8	q22.3	UniSTS
Cytogenetic Map	6	p21.33	UniSTS
Cytogenetic Map	7	q22.1	UniSTS
Cytogenetic Map	2	q21.3	UniSTS
Cytogenetic Map	2	q21.1	UniSTS
Cytogenetic Map	8	p21.2	UniSTS
Cytogenetic Map	X	q22.1	UniSTS
Cytogenetic Map	10	q22.2	UniSTS
Cytogenetic Map	1	p34.2	UniSTS
Cytogenetic Map	19	q13.41	UniSTS
Cytogenetic Map	14	q32.12	UniSTS
Cytogenetic Map	3	q21.3	UniSTS
Cytogenetic Map	4	q34.1	UniSTS
Cytogenetic Map	10	p13	UniSTS
Cytogenetic Map	17	q25.3	UniSTS
Cytogenetic Map	3	q13.31	UniSTS
Cytogenetic Map	7	q21.12	UniSTS
Cytogenetic Map	15	q22.2	UniSTS
Cytogenetic Map	8	p23.1	UniSTS
Cytogenetic Map	5	q32	UniSTS
Cytogenetic Map	20	q13.12	UniSTS
Cytogenetic Map	12	q23.2	UniSTS
Cytogenetic Map	6	p22	UniSTS
Cytogenetic Map	11	q12.3	UniSTS
Cytogenetic Map	11	p13	UniSTS
Cytogenetic Map	1	q21.3	UniSTS
Cytogenetic Map	16	p13.13	UniSTS
Cytogenetic Map	1	p34	UniSTS
Cytogenetic Map	1	p36.21	UniSTS
Cytogenetic Map	12	q13	UniSTS
Cytogenetic Map	19	q13.31	UniSTS
Cytogenetic Map	19	q13.4	UniSTS
Cytogenetic Map	4	p14	UniSTS
Cytogenetic Map	1	q44	UniSTS
Cytogenetic Map	19	p13.1-p12	UniSTS
Cytogenetic Map	7	q22	UniSTS
Cytogenetic Map	8	q24	UniSTS
Cytogenetic Map	18	p11.31-p11.21	UniSTS
Cytogenetic Map	21	q22.3	UniSTS
Cytogenetic Map	7	p21.2	UniSTS
Cytogenetic Map	12	q23-q24.1	UniSTS
Cytogenetic Map	15	q15.1	UniSTS
Cytogenetic Map	10	q11.23	UniSTS
Cytogenetic Map	5	q14.1	UniSTS
Cytogenetic Map	5	p15.33	UniSTS
Cytogenetic Map	1	q21	UniSTS
Cytogenetic Map	22	q11.21	UniSTS
Cytogenetic Map	8	q24.3	UniSTS
Cytogenetic Map	1	q42.1	UniSTS
Cytogenetic Map	12	p13	UniSTS
Cytogenetic Map	15	q21	UniSTS
Cytogenetic Map	6	p21.3	UniSTS
Cytogenetic Map	8	p11.22	UniSTS
Cytogenetic Map	2	q12.3	UniSTS
Cytogenetic Map	19	q13.3-q13.4	UniSTS
Cytogenetic Map	15	q11.2	UniSTS
Cytogenetic Map	5	q35	UniSTS
Cytogenetic Map	8	p23-p22	UniSTS
Cytogenetic Map	12	p11	UniSTS
Cytogenetic Map	17	q21-q22	UniSTS
Cytogenetic Map	12	q13.12	UniSTS
Cytogenetic Map	2	q36.1	UniSTS
Cytogenetic Map	11	p13-p12	UniSTS
Cytogenetic Map	X	p22.33	UniSTS
Cytogenetic Map	Y	p11.3	UniSTS
Cytogenetic Map	2	q12.1	UniSTS
Cytogenetic Map	3	p21.31	UniSTS
Cytogenetic Map	3	q26.32	UniSTS
Cytogenetic Map	7	q11.21	UniSTS
Cytogenetic Map	10	q11.22	UniSTS
Cytogenetic Map	17	p12	UniSTS
Cytogenetic Map	3	p25.1	UniSTS
Cytogenetic Map	14	q32	UniSTS
Cytogenetic Map	5	q12-q13	UniSTS
Cytogenetic Map	6	p23	UniSTS
Cytogenetic Map	20	p12.3-p11.21	UniSTS
Cytogenetic Map	17	q11.2-q12	UniSTS
Cytogenetic Map	11	q23.3	UniSTS
Cytogenetic Map	12	q13.3	UniSTS
Cytogenetic Map	10	q23-q24	UniSTS
Cytogenetic Map	14	q21.3	UniSTS
Cytogenetic Map	11	q13	UniSTS
Cytogenetic Map	12	q13-q14	UniSTS
Cytogenetic Map	6	q14.1	UniSTS
Cytogenetic Map	3	q26.33	UniSTS
Cytogenetic Map	X	p22.2	UniSTS
Cytogenetic Map	1	p31	UniSTS
Cytogenetic Map	15	q15-q21.1	UniSTS
Cytogenetic Map	9	q32	UniSTS
Cytogenetic Map	17	p13	UniSTS
Cytogenetic Map	7	q21-q22	UniSTS
Cytogenetic Map	16	q24.1	UniSTS
Cytogenetic Map	2	q33.3	UniSTS
Cytogenetic Map	11	q22.1	UniSTS
Cytogenetic Map	1	p13.3	UniSTS
Cytogenetic Map	20	p13	UniSTS
Cytogenetic Map	6	p21.1	UniSTS
Cytogenetic Map	7	q36.3	UniSTS
Cytogenetic Map	5	q12.3	UniSTS
Cytogenetic Map	2	q33.2	UniSTS
Cytogenetic Map	12	q22	UniSTS
Cytogenetic Map	21	p11.1	UniSTS
Cytogenetic Map	14	q23.2	UniSTS
Cytogenetic Map	6	p22.3-p22.1	UniSTS
Cytogenetic Map	7	p11.2	UniSTS
Cytogenetic Map	6	q15	UniSTS
Cytogenetic Map	X	q25-q26.3	UniSTS
Cytogenetic Map	10	q22.3	UniSTS
Cytogenetic Map	12	q24.31-q24.32	UniSTS
Cytogenetic Map	16	p12.3	UniSTS
Cytogenetic Map	9	q33.2	UniSTS
Cytogenetic Map	15	q23	UniSTS
Cytogenetic Map	12	p12.2-p11.2	UniSTS
Cytogenetic Map	2	q14.3	UniSTS
Cytogenetic Map	X	p11	UniSTS
Cytogenetic Map	19	q13	UniSTS
Cytogenetic Map	17	q22	UniSTS
Cytogenetic Map	3	q21	UniSTS
Cytogenetic Map	20	q13.2	UniSTS
Cytogenetic Map	10	q26	UniSTS
Cytogenetic Map	6	q22.31	UniSTS
Cytogenetic Map	3	q27.1	UniSTS
Cytogenetic Map	7	p13	UniSTS
Cytogenetic Map	22	q13	UniSTS
Cytogenetic Map	11	q13.1	UniSTS
Cytogenetic Map	18	p11.32	UniSTS
Cytogenetic Map	12	q15	UniSTS
Cytogenetic Map	X	q22.3	UniSTS
Cytogenetic Map	2	p25.3	UniSTS
Cytogenetic Map	16	q21	UniSTS
Cytogenetic Map	11	q23.1	UniSTS
Cytogenetic Map	3	q13.13	UniSTS
Cytogenetic Map	12	q24.31	UniSTS
Cytogenetic Map	3	q27.3	UniSTS
Cytogenetic Map	4	p13	UniSTS
Cytogenetic Map	16	p12.1	UniSTS
Cytogenetic Map	14	q32.11	UniSTS
Cytogenetic Map	7	p14.3	UniSTS
Cytogenetic Map	16	q12.1	UniSTS
Cytogenetic Map	15	q25.2	UniSTS
Cytogenetic Map	9	q21.13	UniSTS
Cytogenetic Map	2	p23.3	UniSTS
Cytogenetic Map	3	q29	UniSTS
Cytogenetic Map	15	q22.31	UniSTS
Cytogenetic Map	16	q22.2	UniSTS
Cytogenetic Map	19	p13.12	UniSTS
Cytogenetic Map	20	q13.1	UniSTS
Cytogenetic Map	3	p14.3	UniSTS
Cytogenetic Map	10	q23.33	UniSTS
Cytogenetic Map	12	p12	UniSTS
Cytogenetic Map	9	p24.1-p23	UniSTS
Cytogenetic Map	15	q22	UniSTS
Cytogenetic Map	6	p25	UniSTS
Cytogenetic Map	X	q12-q13	UniSTS
Cytogenetic Map	2	p16.1	UniSTS
Cytogenetic Map	14	q23	UniSTS
Cytogenetic Map	2	q31.1	UniSTS
Cytogenetic Map	17	q23.3	UniSTS
Cytogenetic Map	1	q42.1-q43	UniSTS
Cytogenetic Map	7	q31.1-q31.3	UniSTS
Cytogenetic Map	20	q11.21	UniSTS
Cytogenetic Map	20	q12-q13.12	UniSTS
Cytogenetic Map	1	q24-q25.3	UniSTS
Cytogenetic Map	20	p12.1	UniSTS
Cytogenetic Map	14	q32.31	UniSTS
Cytogenetic Map	1	p13.2	UniSTS
Cytogenetic Map	2	p13.3	UniSTS
Cytogenetic Map	6	q25.1-q26	UniSTS
Cytogenetic Map	12	q13.11-q14.3	UniSTS
Cytogenetic Map	7	p11	UniSTS
Cytogenetic Map	12	p11.22	UniSTS
Cytogenetic Map	17	q23.1	UniSTS
Cytogenetic Map	1	p36.13	UniSTS
Cytogenetic Map	9	q34.11	UniSTS
Cytogenetic Map	2	p15	UniSTS
Cytogenetic Map	9	p11	UniSTS
Cytogenetic Map	6	p24.3	UniSTS
Cytogenetic Map	9	p24.1	UniSTS
Cytogenetic Map	12	p13.2	UniSTS
Cytogenetic Map	6	p22.2	UniSTS
Cytogenetic Map	12	q24.2-q24.31	UniSTS
Cytogenetic Map	22	q12.2	UniSTS
Cytogenetic Map	11	p11.11	UniSTS
Cytogenetic Map	11	q22-q23	UniSTS
Cytogenetic Map	11	q14.1	UniSTS
Cytogenetic Map	1	q32.1	UniSTS
Cytogenetic Map	15	q22-q23	UniSTS
Cytogenetic Map	9	p21	UniSTS
Cytogenetic Map	15	q13.1	UniSTS
Cytogenetic Map	15	q22-qter	UniSTS
Cytogenetic Map	10	q25	UniSTS
Cytogenetic Map	6	p22.3	UniSTS
Cytogenetic Map	6	p25.2	UniSTS
Cytogenetic Map	5	p15.1	UniSTS
Cytogenetic Map	2	p21	UniSTS
Cytogenetic Map	22	q13.31	UniSTS
Cytogenetic Map	21	q22.2	UniSTS
Cytogenetic Map	19	q13.33	UniSTS
Cytogenetic Map	14	q24.1	UniSTS
Cytogenetic Map	13	q34	UniSTS
Cytogenetic Map	18	q11.2	UniSTS
Cytogenetic Map	6	q25.1	UniSTS
Cytogenetic Map	20	q11.23	UniSTS
Cytogenetic Map	1	q21.1	UniSTS
Cytogenetic Map	17	q24.3	UniSTS
Cytogenetic Map	16	q11.2	UniSTS
Cytogenetic Map	16	p12.2	UniSTS
Cytogenetic Map	11	q24	UniSTS
Cytogenetic Map	2	q23.3	UniSTS
Cytogenetic Map	1	p31.1	UniSTS
Cytogenetic Map	18	q23	UniSTS
Cytogenetic Map	11	q13.4	UniSTS
Cytogenetic Map	7	p21.1	UniSTS
Cytogenetic Map	2	q37.1	UniSTS
Cytogenetic Map	8	p11.2	UniSTS
Cytogenetic Map	9	q33.3	UniSTS
Cytogenetic Map	4	q22.1	UniSTS
Cytogenetic Map	2	q21.2	UniSTS
Cytogenetic Map	15	q13.3	UniSTS
Cytogenetic Map	7	p15.3	UniSTS
Cytogenetic Map	3	p22.2	UniSTS
Cytogenetic Map	11	q13.2	UniSTS
Cytogenetic Map	19	p13.2-cen	UniSTS
Cytogenetic Map	19	p13.3-p13.2	UniSTS
Cytogenetic Map	13	q32.3	UniSTS
Cytogenetic Map	9	q33	UniSTS
Cytogenetic Map	1	p36-p35	UniSTS
Cytogenetic Map	19	q13.1	UniSTS
Cytogenetic Map	X	q25	UniSTS
Cytogenetic Map	12	q23	UniSTS
Cytogenetic Map	21	q22.13	UniSTS
Cytogenetic Map	2	q24.2	UniSTS
Cytogenetic Map	7	q31.1-q31.2	UniSTS
Cytogenetic Map	22	q11.23	UniSTS
Cytogenetic Map	X	q24	UniSTS
Cytogenetic Map	4	q25-q27	UniSTS
Cytogenetic Map	3	q25.33	UniSTS
Cytogenetic Map	X	q26.2	UniSTS
Cytogenetic Map	8	q13.2	UniSTS
Cytogenetic Map	8	q13.1	UniSTS
Cytogenetic Map	8	q22.2	UniSTS
Cytogenetic Map	6	q21	UniSTS
Cytogenetic Map	5	q23.1	UniSTS
Cytogenetic Map	4	q13.3	UniSTS
Cytogenetic Map	3	p26.1	UniSTS
Cytogenetic Map	1	q21.2	UniSTS
Cytogenetic Map	17	p13.1	UniSTS
Cytogenetic Map	3	p22-p21.3	UniSTS
Cytogenetic Map	12	q	UniSTS
Cytogenetic Map	X	q21.3	UniSTS
Cytogenetic Map	12	q12	UniSTS
Cytogenetic Map	20	p11	UniSTS
Cytogenetic Map	6	p12.3	UniSTS
Cytogenetic Map	5	p13.1-p12	UniSTS
Cytogenetic Map	1	p36.22	UniSTS
Cytogenetic Map	9	q34	UniSTS
Cytogenetic Map	7	q21.13	UniSTS
Cytogenetic Map	20	q13.33	UniSTS
Cytogenetic Map	3	p21.1-p14.3	UniSTS
Cytogenetic Map	2	q33.1	UniSTS
Cytogenetic Map	7	q36.1	UniSTS
Cytogenetic Map	10	q24.31	UniSTS
Cytogenetic Map	2	p25.1-p24.1	UniSTS
Cytogenetic Map	3	q23	UniSTS
Cytogenetic Map	13	q12.11	UniSTS
Cytogenetic Map	12	q14.3	UniSTS
Cytogenetic Map	13	q14.13	UniSTS
Cytogenetic Map	11	p15	UniSTS
Cytogenetic Map	6	q14.3-q16.1	UniSTS
Cytogenetic Map	16	p13.2	UniSTS
Cytogenetic Map	16	q22.3	UniSTS
Cytogenetic Map	1	p32-p31	UniSTS
Cytogenetic Map	12	q13.13	UniSTS
Cytogenetic Map	8	p11	UniSTS
Cytogenetic Map	6	q25	UniSTS
Cytogenetic Map	8	p11.23	UniSTS
Cytogenetic Map	9	p24.3	UniSTS
Cytogenetic Map	7	q35	UniSTS
Cytogenetic Map	11	q22.3	UniSTS
Cytogenetic Map	16	p12	UniSTS
Cytogenetic Map	6	q14.3	UniSTS
Cytogenetic Map	7	q36	UniSTS
Cytogenetic Map	1	q22	UniSTS
Cytogenetic Map	10	p15.3	UniSTS
Cytogenetic Map	8	p12	UniSTS
Cytogenetic Map	13	q12.2	UniSTS
Cytogenetic Map	7	p22.1	UniSTS
Cytogenetic Map	6	p21.2	UniSTS
Cytogenetic Map	18	q21.1	UniSTS
Cytogenetic Map	10	p11.21	UniSTS
Cytogenetic Map	10	p14	UniSTS
Cytogenetic Map	3	p26	UniSTS
Cytogenetic Map	9	q22.3	UniSTS
Cytogenetic Map	17	q21.1-q21.3	UniSTS
Cytogenetic Map	6	q11.1	UniSTS
Cytogenetic Map	5	q13.2	UniSTS
Cytogenetic Map	3	q21.1	UniSTS
Cytogenetic Map	1	q32	UniSTS
Cytogenetic Map	22	q13.1-q13.2	UniSTS
Cytogenetic Map	19	p12	UniSTS
Cytogenetic Map	9	q32-q33.3	UniSTS
Cytogenetic Map	8	q21.2	UniSTS
Cytogenetic Map	18	q12.1	UniSTS
Cytogenetic Map	12	p13.2-p12.3	UniSTS
Cytogenetic Map	1	p36.3-p36.2	UniSTS
Cytogenetic Map	5	q11.2	UniSTS
Cytogenetic Map	1	q25.2	UniSTS
Cytogenetic Map	3	q13.2	UniSTS
Cytogenetic Map	8	p22	UniSTS
Cytogenetic Map	1	q25.1	UniSTS
Cytogenetic Map	18	q21.32	UniSTS
Cytogenetic Map	17	q21.2	UniSTS
Cytogenetic Map	15	q26.2	UniSTS
Cytogenetic Map	14	q22.1	UniSTS
Cytogenetic Map	5	p15.2	UniSTS
Cytogenetic Map	12	q23.1	UniSTS
Cytogenetic Map	10	q24.2	UniSTS
Cytogenetic Map	15	q15.3	UniSTS
Cytogenetic Map	1	p22.2	UniSTS
Cytogenetic Map	7	q32	UniSTS
Cytogenetic Map	5	p13	UniSTS
Cytogenetic Map	16	q23.2	UniSTS
Cytogenetic Map	10	q24-q25	UniSTS
Cytogenetic Map	7	p11.1	UniSTS
Cytogenetic Map	14	q11.2-q21	UniSTS
Cytogenetic Map	14	q12	UniSTS
Cytogenetic Map	12	q24.13	UniSTS
Cytogenetic Map	10	q21-q22	UniSTS
Cytogenetic Map	4	q22	UniSTS
Cytogenetic Map	9	q22.2	UniSTS
Cytogenetic Map	10	q23.31	UniSTS
Cytogenetic Map	2	p13.1	UniSTS
Cytogenetic Map	2	p24.1	UniSTS
Cytogenetic Map	19	p13	UniSTS
Cytogenetic Map	7	p13-p11.1	UniSTS
Cytogenetic Map	7	q21.1-q22	UniSTS
Cytogenetic Map	1	p36.3	UniSTS
Cytogenetic Map	15	q26.1	UniSTS
Cytogenetic Map	2	q32.1	UniSTS
Cytogenetic Map	5	p14.3	UniSTS
Cytogenetic Map	X	p22.13	UniSTS
Cytogenetic Map	13	q14.2	UniSTS
Cytogenetic Map	15	q	UniSTS
Cytogenetic Map	7	q	UniSTS
Cytogenetic Map	17	q25.1	UniSTS
Cytogenetic Map	10	q23	UniSTS
Cytogenetic Map	5	p12	UniSTS
Cytogenetic Map	11	p11.2	UniSTS
Cytogenetic Map	10	q11.21	UniSTS
Cytogenetic Map	20	q13.13	UniSTS
Cytogenetic Map	13	q22.1	UniSTS
Cytogenetic Map	15	q21.2	UniSTS
Cytogenetic Map	X	q28	UniSTS
Cytogenetic Map	9	p13.1	UniSTS
Cytogenetic Map	9	q34.13	UniSTS

RH11537

Human Assembly	Chr	Position (strand)	Source	JBrowse
Cytogenetic Map	7	q11.21	UniSTS
Cytogenetic Map	7	p11.2	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system

circulatory system

endocrine system

exocrine system

hemolymphoid system

hepatobiliary system

integumental system

musculoskeletal system

nervous system

renal system

reproductive system

respiratory system

sensory system

adipose tissue

appendage

entire extraembryonic component

High

Medium

1518

343

314

463

1454

788

980

721

583

272

892

Low

914

2545

1402

572

1408

419

2900

1385

2712

347

726

1024

162

932

1895

Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NR_003110	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC073107	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK092180	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC052238	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC073761	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC119782	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC122874	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CP068271	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENST00000434500

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	7	65,751,142 - 65,763,336 (+)	Ensembl

RefSeq Acc Id:

ENST00000442266

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	7	65,751,115 - 65,763,673 (+)	Ensembl

RefSeq Acc Id:

ENST00000443108

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	7	65,751,073 - 65,763,673 (+)	Ensembl

RefSeq Acc Id:

ENST00000685316

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	7	65,751,115 - 65,764,220 (+)	Ensembl

RefSeq Acc Id:

ENST00000685398

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	7	65,751,120 - 65,764,222 (+)	Ensembl

RefSeq Acc Id:

ENST00000686363

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	7	65,751,037 - 65,764,225 (+)	Ensembl

RefSeq Acc Id:

ENST00000686689

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	7	65,751,064 - 65,763,673 (+)	Ensembl

RefSeq Acc Id:

ENST00000687809

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	7	65,751,058 - 65,764,222 (+)	Ensembl

RefSeq Acc Id:

ENST00000688184

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	7	65,751,060 - 65,764,222 (+)	Ensembl

RefSeq Acc Id:

ENST00000688478

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	7	65,751,069 - 65,764,222 (+)	Ensembl

RefSeq Acc Id:

ENST00000688735

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	7	65,751,039 - 65,764,225 (+)	Ensembl

RefSeq Acc Id:

ENST00000688944

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	7	65,751,051 - 65,764,220 (+)	Ensembl

RefSeq Acc Id:

ENST00000689785

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	7	65,751,078 - 65,763,673 (+)	Ensembl

RefSeq Acc Id:

ENST00000689814

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	7	65,751,051 - 65,764,222 (+)	Ensembl

RefSeq Acc Id:

ENST00000690196

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	7	65,751,052 - 65,764,222 (+)	Ensembl

RefSeq Acc Id:

ENST00000690636

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	7	65,751,054 - 65,763,673 (+)	Ensembl

RefSeq Acc Id:

ENST00000691983

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	7	65,751,058 - 65,763,673 (+)	Ensembl

RefSeq Acc Id:

ENST00000701810

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	7	65,751,071 - 65,764,222 (+)	Ensembl

RefSeq Acc Id:

ENST00000702578

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	7	65,751,074 - 65,764,218 (+)	Ensembl

RefSeq Acc Id:

ENST00000702585

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	7	65,751,051 - 65,764,221 (+)	Ensembl

RefSeq Acc Id:

NR_003110

RefSeq Status:

PROVISIONAL

Type:

NON-CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	7	65,751,105 - 65,763,675 (+)	NCBI
GRCh37	7	65,216,092 - 65,228,662 (+)	RGD
Build 36	7	64,853,527 - 64,866,097 (+)	NCBI Archive
Celera	7	58,331,511 - 58,342,159 (+)	RGD
HuRef	7	61,405,038 - 61,425,900 (+)	ENTREZGENE
CHM1_1	7	65,311,393 - 65,323,958 (+)	NCBI
T2T-CHM13v2.0	7	66,973,233 - 66,985,797 (+)	NCBI
CRA_TCAGchr7v2	7	64,553,612 - 64,566,182 (+)	ENTREZGENE

Sequence:

show sequence

GTGCCGCGTCGCTTTCTTTTCTTCCTCTGGAGCAGTTATGGCGGCGGCGAAGACCCTGAACCCC
AAGGCCAAGGTGGCCGGAGCGCAGGCGGCGCTGGCGTTCAACATTAGCGGGGCGCGGGGTCTGC
AGGACGTGCTGAGGACCAACCTGGGGCCCAAAGGGACCATAAAGATCAAATTCAACACCCAACA
GCTTCCTTAATAGCAAAGGTAGCAACAGCCCAGGATGATATAACTGGTGATGGTACGACTTCCA
ATGTCCTAATCATTGGAGAGCTGCTGAAACAGGCAGATCTCTACATTTCTGAAGGCCTTCATCC
CAGAATAATCACTGAAGGATTTGAAGCTGTGAAGGAAAAGCCCTTCATTTTTTGGAAGAAGTCA
AAGTAAGCAGAGAGATGGACAAGGAAACACTTAAAGATGTGGCCAGGGCATCTCTTTGTACTAA
AGTTCATGCTGAACTTGCAGATGTCTTAACAGAGGCTGTAGTGGGCTCCATTTTGGCCATTAAA
AGAAAAGATGAACCTATTGATCTCTTCATGATTTTGTGATCATTGACAAGAAACATAAATCTGA
AACTGATACAAGAGAAGTGAATTCTGGCGTTTTTTACAAGAGTGCAGAAAGAGAAAAACTCATA
AAAGCTGAAAGAAAATTCATTGAAGATAGAGTTAAAACAAATAATAGAACTGAAAAGGAAAGTC
TGTAGTAATTCAGATAAAGGATTTGTTATTAATCAAAAGGGAATTGACCCCTTTTCCTTAGATG
CTCTTTCAAAGAAGGCATAGTCGCTCTTCACAGAGCTAAAAGGAGGAATATGGAGAGGCTGACT
CTTGCTTGTGGTGGGGTGGCCCTGAATTCTTTTGAGGACCTAAGTCCTGACTGCTTGAGACATG
CAGGACTTGTATATGAGTATACATTGGGAGAAGTTCACCTTTATTGAGAAGTGTAACAACCCTC
GTTCTGTCACATTATTGATCAAAGGACCAAATAAGCCCACACTTAGATCAAAGATGCAGTAAGG
GATGGCTTGAGGGCTGTCAAAAATGCTATTGATGATGGCTGTGTGGTTCCGGTGCTGGTGCCGT
GGAAGTGGCAATGGCAGAAGCCCTGAATAAATATAAGCTCAGTGTAAAGGGCAAGGCACAGCTT
GGAGTCCAAGCATTTGCTGATGTGTTGCTCGTTATTCCCAAGGTTCTTGCGCAGAATTCTGGTT
TTGACCTTCAGGAAACATTAGTTAAAATTTAAGCAGAACATTCAGAATCAGGTCAGCTCGTGGG
TGTGGACCTGAACACAGGTGAGCCCGTGGTAGCAGCAGAAGCAGGCATTATGGGATAACGATTG
TGTAAAGAAACAGCTTCTTCATTCCTGCACTGGTTGCCACCAACATTCTCTTGGTTGATGAGAT
CATGCGAGCTGGAATCTTCTCTGAAAGGTTGAATTGAAGCTTCCTCTGTATCTGAGTCTTGAAG
ACTCTGCAAAGTGATCCTGAAGAATACAGCTGTGGAATTTTTGTCCAAGCTTCAAATGAGTTTC
AAGGGAATTTTCCCATGTGAAAAAAGGAGAGAACACTGGCATCTGTTGAAATTCGGAAGTTCTG
AAATTATAATCACAGTATTTTTTAAAAATTGCACTGAAGTGTACACAGATAAAGCAGGTCTTTC
ACCCAGTGAACAGGATGTTTTGCTTTAGCAGCAGTGACATAAAATTCCATGTTAAATAAGCATA
TATTACCTACCTTATTAAATATTCCTTGAAAAAGCAGAAAAAAAAAAAAAAAAAA

hide sequence

Promoters

RGD ID:

6806362

Promoter ID:

HG_KWN:57766

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

CD4+TCell, CD4+TCell_12Hour, CD4+TCell_2Hour, HeLa_S3, K562, Lymphoblastoid, NB4

Transcripts:

NR_003110, OTTHUMT00000345505, UC003TUF.2, UC003TUH.1, UC003TUI.1

Position:

Human Assembly	Chr	Position (strand)	Source
Build 36	7	64,853,366 - 64,854,172 (-)	MPROMDB

Additional Information

External Database Links

Database	Acc Id	Source(s)
COSMIC	CCT6P1	COSMIC
Ensembl Genes	ENSG00000228409	Ensembl
	ENSG00000291124	ENTREZGENE
Ensembl Transcript	ENST00000686689	ENTREZGENE
GTEx	ENSG00000228409	GTEx
	ENSG00000291124	GTEx
HGNC ID	HGNC:33094	ENTREZGENE
Human Proteome Map	CCT6P1	Human Proteome Map
NCBI Gene	643253	ENTREZGENE
PharmGKB	PA147358194	PharmGKB

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-01-12	CCT6P1	chaperonin containing TCP1 subunit 6 pseudogene 1		chaperonin containing TCP1, subunit 6 (zeta) pseudogene 1	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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