Gene-Chemical Interaction Annotations
Click to see Annotation Detail View
References
References - curated
Genomics
Variants
QTLs in Region (mRatBN7.2)
RGD ID | Symbol | Name | LOD | P Value | Trait | Sub Trait | Chr | Start | Stop | Species | 1354642 | Despr15 | Despair related QTL 15 | 0.0027 | locomotor behavior trait (VT:0001392) | amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958) | 20 | 1 | 24159021 | Rat | 1600382 | Edcs3 | Endometrial carcinoma susceptibility QTL3 | 3.5 | 0.003 | uterus morphology trait (VT:0001120) | percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759) | 20 | 1 | 25159026 | Rat | 2317851 | Alcrsp22 | Alcohol response QTL 22 | 3.2 | 0.05 | response to alcohol trait (VT:0010489) | duration of loss of righting reflex (CMO:0002289) | 20 | 1 | 27339237 | Rat | 1641893 | Alcrsp7 | Alcohol response QTL 7 | response to alcohol trait (VT:0010489) | duration of loss of righting reflex (CMO:0002289) | 20 | 1 | 27339237 | Rat | 8694189 | Bw153 | Body weight QTL 153 | 3.13 | 0.001 | body mass (VT:0001259) | body weight gain (CMO:0000420) | 20 | 1 | 29191651 | Rat | 9590275 | Scort15 | Serum corticosterone level QTL 15 | 3.48 | 0.001 | blood corticosterone amount (VT:0005345) | plasma corticosterone level (CMO:0001173) | 20 | 1 | 29191651 | Rat | 7411650 | Foco23 | Food consumption QTL 23 | 20.7 | 0.001 | eating behavior trait (VT:0001431) | feed conversion ratio (CMO:0001312) | 20 | 1 | 29191651 | Rat | 9590109 | Sffal8 | Serum free fatty acids level QTL 8 | 5.32 | 0.01 | blood free fatty acid amount (VT:0001553) | plasma free fatty acids level (CMO:0000546) | 20 | 1 | 29191651 | Rat | 9589155 | Insul32 | Insulin level QTL 32 | 6.38 | 0.001 | blood insulin amount (VT:0001560) | plasma insulin level (CMO:0000342) | 20 | 1 | 29191651 | Rat | 6893685 | Bw111 | Body weight QTL 111 | 2.7 | 0.004 | body mass (VT:0001259) | body weight (CMO:0000012) | 20 | 1 | 32578807 | Rat | 7411668 | Foco32 | Food consumption QTL 32 | 8 | 0.001 | eating behavior trait (VT:0001431) | feed conversion ratio (CMO:0001312) | 20 | 1 | 36600972 | Rat | 9590252 | Scort12 | Serum corticosterone level QTL 12 | 20.46 | 0.001 | blood corticosterone amount (VT:0005345) | plasma corticosterone level (CMO:0001173) | 20 | 1 | 36600972 | Rat | 2305926 | Iddm37 | Insulin dependent diabetes mellitus QTL 37 | 6 | blood glucose amount (VT:0000188) | plasma glucose level (CMO:0000042) | 20 | 1527842 | 46527842 | Rat | 1641915 | Colcr9 | Colorectal carcinoma resistance QTL 9 | 2.97 | 0.0024 | intestine integrity trait (VT:0010554) | benign colorectal tumor number (CMO:0001795) | 20 | 1530655 | 46530655 | Rat | 1598816 | Memor12 | Memory QTL 12 | 2.4 | exploratory behavior trait (VT:0010471) | average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674) | 20 | 2606836 | 47606836 | Rat | 2317057 | Aia27 | Adjuvant induced arthritis QTL 27 | 2.83 | joint integrity trait (VT:0010548) | right rear ankle joint diameter (CMO:0002150) | 20 | 2892597 | 26381954 | Rat | 4889870 | Pur30 | Proteinuria QTL 30 | 19 | 0.005 | urine total protein amount (VT:0000032) | urine total protein excretion rate (CMO:0000756) | 20 | 8042410 | 29322208 | Rat | 7411652 | Foco24 | Food consumption QTL 24 | 0.001 | eating behavior trait (VT:0001431) | feed conversion ratio (CMO:0001312) | 20 | 11757515 | 54435887 | Rat | 9590092 | Insglur9 | Insulin/glucose ratio QTL 9 | 18.38 | 0.001 | blood insulin amount (VT:0001560) | calculated plasma insulin level (CMO:0002170) | 20 | 11757515 | 54435887 | Rat | 4889610 | Pancm3 | Pancreatic morphology QTL 3 | 3.75 | 0.001 | pancreas mass (VT:0010144) | pancreas wet weight (CMO:0000626) | 20 | 17617832 | 47606836 | Rat | 2317880 | Alcrsp25 | Alcohol response QTL 25 | 2.3 | response to alcohol trait (VT:0010489) | duration of loss of righting reflex (CMO:0002289) | 20 | 17697550 | 54435887 | Rat | 2303626 | Vencon10 | Ventilatory control QTL 10 | 0.001 | respiration trait (VT:0001943) | respiration rate (CMO:0000289) | 20 | 19190721 | 54435887 | Rat | |
Markers in Region
D20Rat35 |
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Expression
Sequence
Nucleotide Sequences
GenBank Nucleotide | JAXUCZ010000020 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
Additional Information
External Database Links
Database | Acc Id | Source(s) |
BioCyc Gene | G2FUF-3918 | BioCyc |
NCBI Gene | 365556 | ENTREZGENE |
PhenoGen | Rpl5-ps4 | PhenoGen |
Nomenclature History
Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
---|---|---|---|---|---|---|---|
2022-06-10 | Rpl5-ps4 | ribosomal protein L5, pseudogene 4 | RGD1564320 | similar to 60S ribosomal protein L5 | Symbol and Name Changed | 1299863 | APPROVED |
2008-04-30 | RGD1564320 | similar to 60S ribosomal protein L5 | RGD1564320_predicted | similar to 60S ribosomal protein L5 (predicted) | 'predicted' is removed | 2292626 | APPROVED |
2006-03-07 | RGD1564320_predicted | similar to 60S ribosomal protein L5 (predicted) | LOC365556 | similar to 60S ribosomal protein L5 | Symbol and Name status set to approved | 1299863 | APPROVED |
2006-02-09 | LOC365556 | similar to 60S ribosomal protein L5 | Symbol and Name status set to provisional | 70820 | PROVISIONAL |