Gm23410 (predicted gene, 23410) - Rat Genome Database

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Gene: Gm23410 (predicted gene, 23410) Mus musculus
Analyze
Symbol: Gm23410
Name: predicted gene, 23410
RGD ID: 15558050
MGI Page MGI
Description:
Type: snrna
RefSeq Status: MODEL
Previously known as: LOC115487564
Latest Assembly: GRCm39 Ensembl - Mouse Genome Assembly GRCm39 Ensembl
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391024,769,878 - 24,769,984 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1024,769,878 - 24,769,984 (+)EnsemblGRCm39 Ensembl
GRCm381024,893,980 - 24,894,086 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1024,893,980 - 24,894,086 (+)EnsemblGRCm38mm10GRCm38
Cytogenetic Map10A4NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Gm23410
3 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:131
Count of miRNA genes:128
Interacting mature miRNAs:131
Transcripts:ENSMUST00000179967
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XR_004936646 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC159502 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000179967
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1024,893,980 - 24,894,086 (+)Ensembl
RefSeq Acc Id: ENSMUST00000240129
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1024,769,878 - 24,769,984 (+)Ensembl
RefSeq Acc Id: XR_004936646
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391024,769,878 - 24,769,984 (+)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000096809 Ensembl
  ENSMUSG00000119470 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000240129 ENTREZGENE
MGD MGI:5453187 ENTREZGENE
NCBI Gene LOC115487564 ENTREZGENE
PhenoGen Gm23410 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-12-06 Gm23410  predicted gene, 23410  U6  U6 spliceosomal RNA  Symbol and/or name updated 27372883 PROVISIONAL
2021-05-06 U6  U6 spliceosomal RNA  Gm23410  predicted gene, 23410  Symbol and/or name change 19259462 PROVISIONAL
2021-04-26 Gm23410  predicted gene, 23410  AC159502.1    Symbol and/or name updated 27372883 PROVISIONAL
2021-04-22 AC159502.1    Gm23410  predicted gene, 23410  Symbol and/or name change 19259462 PROVISIONAL
2021-04-12 Gm23410  predicted gene, 23410  AC159502.1    Symbol and/or name updated 27372883 PROVISIONAL
2021-03-18 AC159502.1    Gm23410  predicted gene, 23410  Symbol and/or name change 19259462 PROVISIONAL
2021-03-15 Gm23410  predicted gene, 23410  AC159502.1    Symbol and/or name updated 27372883 PROVISIONAL
2021-03-11 AC159502.1    Gm23410  predicted gene, 23410  Symbol and/or name change 19259462 PROVISIONAL
2020-06-25 Gm23410  predicted gene, 23410  LOC115487564  U6 spliceosomal RNA  Symbol and/or name change 19259462 PROVISIONAL
2020-06-19 LOC115487564  U6 spliceosomal RNA  Gm23410  predicted gene, 23410  Symbol and/or name change 5135510 APPROVED