Gm22285 (predicted gene, 22285) - Rat Genome Database

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Gene: Gm22285 (predicted gene, 22285) Mus musculus
Analyze
No known orthologs.
Symbol: Gm22285
Name: predicted gene, 22285
RGD ID: 15557835
MGI Page MGI
Description:
Type: snorna
RefSeq Status: MODEL
Previously known as: LOC115486752
RGD Orthologs
Alliance Orthologs
More Info homologs ...
Latest Assembly: GRCm39 Ensembl - Mouse Genome Assembly GRCm39 Ensembl
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39759,328,257 - 59,328,350 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl759,328,257 - 59,328,350 (-)EnsemblGRCm39 Ensembl
GRCm38759,678,509 - 59,678,602 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl759,678,509 - 59,678,602 (-)EnsemblGRCm38mm10GRCm38
Cytogenetic Map7B5NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:218
Count of miRNA genes:207
Interacting mature miRNAs:218
Transcripts:ENSMUST00000178576
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XR_004934607 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC168073 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000178576
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl759,678,509 - 59,678,602 (-)Ensembl
RefSeq Acc Id: ENSMUST00000239847
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl759,328,257 - 59,328,350 (-)Ensembl
RefSeq Acc Id: XR_004934607
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39759,328,257 - 59,328,350 (-)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000094890 Ensembl
  ENSMUSG00000118926 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000239847 ENTREZGENE
MGD MGI:5452062 ENTREZGENE
NCBI Gene LOC115486752 ENTREZGENE
PhenoGen Gm22285 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-05-10 Gm22285  predicted gene, 22285  SNORD116  Small nucleolar RNA SNORD116  Symbol and/or name updated 27372883 PROVISIONAL
2021-05-06 SNORD116  Small nucleolar RNA SNORD116  Gm22285  predicted gene, 22285  Symbol and/or name change 19259462 PROVISIONAL
2021-04-26 Gm22285  predicted gene, 22285  AC168073.14    Symbol and/or name updated 27372883 PROVISIONAL
2021-04-22 AC168073.14    Gm22285  predicted gene, 22285  Symbol and/or name change 19259462 PROVISIONAL
2021-04-12 Gm22285  predicted gene, 22285  AC168073.14    Symbol and/or name updated 27372883 PROVISIONAL
2021-04-08 AC168073.14    Gm22285  predicted gene, 22285  Symbol and/or name change 19259462 PROVISIONAL
2021-04-05 Gm22285  predicted gene, 22285  AC168073.14    Symbol and/or name updated 27372883 PROVISIONAL
2021-04-01 AC168073.14    Gm22285  predicted gene, 22285  Symbol and/or name change 19259462 PROVISIONAL
2021-03-29 Gm22285  predicted gene, 22285  AC168073.14    Symbol and/or name updated 27372883 PROVISIONAL
2021-03-25 AC168073.14    Gm22285  predicted gene, 22285  Symbol and/or name change 19259462 PROVISIONAL
2021-03-22 Gm22285  predicted gene, 22285  AC168073.14    Symbol and/or name updated 27372883 PROVISIONAL
2021-03-18 AC168073.14    Gm22285  predicted gene, 22285  Symbol and/or name change 19259462 PROVISIONAL
2021-03-15 Gm22285  predicted gene, 22285  AC168073.14    Symbol and/or name updated 27372883 PROVISIONAL
2021-03-11 AC168073.14    Gm22285  predicted gene, 22285  Symbol and/or name change 19259462 PROVISIONAL
2020-07-02 Gm22285  predicted gene, 22285  LOC115486752  small nucleolar RNA SNORD116  Symbol and/or name change 19259462 PROVISIONAL
2020-06-30 LOC115486752  small nucleolar RNA SNORD116  Gm22285  predicted gene, 22285  Symbol and/or name change 5135510 APPROVED
2020-06-25 Gm22285  predicted gene, 22285  LOC115486752  small nucleolar RNA SNORD116  Symbol and/or name change 19259462 PROVISIONAL
2020-06-19 LOC115486752  small nucleolar RNA SNORD116  Gm22285  predicted gene, 22285  Symbol and/or name change 5135510 APPROVED