AABR07010672.1 (null) - Rat Genome Database

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Gene: AABR07010672.1 (null) Rattus norvegicus
Analyze
Symbol: AABR07010672.1
Name:
RGD ID: 15008755
Description:
Type: protein-coding
Latest Assembly: mRatBN7.2 Ensembl - mRatBN7.2 Assembly Ensembl
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2 EnsemblX137,614 - 142,215 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0 Ensembl2147,006,830 - 147,014,015 (+)EnsemblRnor6.0rn6Rnor6.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High 4
Medium 4
Low 1 2 2 1 1 1 2
Below cutoff 1 3 11 7 5 7 3 6 5 2 8 3 3

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENSRNOT00000080780   ⟹   ENSRNOP00000074222
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 EnsemblX137,614 - 142,215 (-)Ensembl
Rnor_6.0 Ensembl2147,006,830 - 147,014,015 (+)Ensembl
Protein Sequences
Ensembl Protein ENSRNOP00000074222.2
Reference Protein Sequences
RefSeq Acc Id: ENSRNOP00000074222   ⟸   ENSRNOT00000080780

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A0G2K7I7-F1-model_v2 AlphaFold A0A0G2K7I7 1-111 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSRNOG00000054545 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000080780.2 UniProtKB/TrEMBL
Gene3D-CATH 2.30.29.30 UniProtKB/TrEMBL
InterPro PH-like_dom_sf UniProtKB/TrEMBL
PANTHER 1700006A11RIK PROTEIN UniProtKB/TrEMBL
  T-CELL ACTIVATION RHO GTPASE ACTIVATING PROTEIN-RELATED UniProtKB/TrEMBL
PhenoGen AABR07010672.1 PhenoGen
RatGTEx ENSRNOG00000054545 RatGTEx
Superfamily-SCOP PH domain-like UniProtKB/TrEMBL
UniProt A0A0G2K7I7_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-11-08 AABR07010672.1        Symbol and Name status set to provisional 45752 PROVISIONAL