| Gene: Gm25434 (predicted gene, 25434) Mus musculus |
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Analyze |
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| Symbol: |
Gm25434 |
| Name: |
predicted gene, 25434 |
| RGD ID: |
14998632 |
| MGI Page |
MGI |
| Description: |
INTERACTS WITH benzo[a]pyrene (ortholog); cisplatin (ortholog); doxorubicin (ortholog) |
| Type: |
ncrna (Ensembl: scaRNA)
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| RefSeq Status: |
MODEL |
| RGD Orthologs |
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| Alliance Genes |
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| More Info |
more info ...
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| More Info |
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| Latest Assembly: |
GRCm39 - Mouse Genome Assembly GRCm39 |
| Position: |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 6 | 139,173,063 - 139,173,229 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 6 | 139,173,063 - 139,173,229 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 6 | 139,196,065 - 139,196,231 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 6 | 139,196,065 - 139,196,231 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | Cytogenetic Map | 6 | G1 | NCBI | | | | |
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| JBrowse: |
View Region in Genome Browser (JBrowse)
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| Model |
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References
Genomics
Comparative Map Data
Gm25434
(Mus musculus - house mouse) |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 6 | 139,173,063 - 139,173,229 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 6 | 139,173,063 - 139,173,229 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 6 | 139,196,065 - 139,196,231 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 6 | 139,196,065 - 139,196,231 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | Cytogenetic Map | 6 | G1 | NCBI | | | | |
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SCARNA16
(Homo sapiens - human) |
| Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 17 | 77,089,307 - 77,089,493 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 17 | 77,089,307 - 77,089,493 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 17 | 75,085,389 - 75,085,575 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 17 | 72,596,984 - 72,597,170 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 17 | 71,680,172 - 71,680,358 (+) | NCBI | | Celera | | | Cytogenetic Map | 17 | q25.2 | NCBI | | | | | HuRef | 17 | 70,512,594 - 70,512,780 (+) | NCBI | | HuRef | | | CHM1_1 | 17 | 75,150,303 - 75,150,489 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 17 | 77,982,158 - 77,982,344 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Scarna16
(Rattus norvegicus - Norway rat) |
| Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 5 | 147,908,870 - 147,909,057 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 10 | 102,276,365 - 102,276,548 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 10 | 102,276,365 - 102,276,548 (+) | Ensembl | | mRatBN7.2 Ensembl | | | Rnor_6.0 Ensembl | 10 | 106,022,125 - 106,022,308 (+) | NCBI | Rnor6.0 | | rn6 | Rnor6.0 | Cytogenetic Map | 10 | q32.2 | NCBI | | | | |
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LOC119869911
(Canis lupus familiaris - dog) |
| Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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Dog10K_Boxer_Tasha | 1 | 110,173,431 - 110,173,612 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 1 | 111,254,715 - 111,254,896 (+) | NCBI | | ROS_Cfam_1.0 | | | UMICH_Zoey_3.1 | 1 | 110,896,360 - 110,896,541 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 1 | 110,532,066 - 110,532,247 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 1 | 111,401,761 - 111,401,942 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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miRNA Target Status
Predicted Target Of
| Count of predictions: | 97 | | Count of miRNA genes: | 95 | | Interacting mature miRNAs: | 97 | | Transcripts: | ENSMUST00000158278 | | Prediction methods: | Miranda, Rnahybrid | | Result types: | miRGate_prediction | |
