LINC02864 (long intergenic non-protein coding RNA 2864)

Gene: LINC02864 (long intergenic non-protein coding RNA 2864) Homo sapiens

Analyze

Symbol:

LINC02864

Name:

long intergenic non-protein coding RNA 2864

RGD ID:

14700756

HGNC Page

HGNC:54480

Description:

ASSOCIATED WITH chromosome 18q deletion syndrome; pulmonary valve stenosis; Pulmonic stenosis

Type:

ncrna (Ensembl: lncRNA)

RefSeq Status:

PREDICTED

Allele / Splice:

See ClinVar data

Latest Assembly:

GRCh38 - Human Genome Assembly GRCh38

Position:

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	18	73,154,058 - 73,264,498 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	18	73,151,241 - 73,264,480 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	18	70,821,293 - 70,931,733 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Cytogenetic Map	18	q22.3	NCBI
HuRef	18	67,553,442 - 67,664,053 (-)	NCBI		HuRef
CHM1_1	18	70,816,512 - 70,926,618 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	18	73,375,458 - 73,485,954 (-)	NCBI		T2T-CHM13v2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

chromosome 18q deletion syndrome (IAGP)

pulmonary valve stenosis (IAGP)

Phenotype Annotations Click to see Annotation Detail View

Human Phenotype

Pulmonic stenosis (IAGP)

References

Additional References at PubMed

PMID:12477932	PMID:16344560	PMID:31368349

Genomics

Clinical Variants

Name	Type	Condition(s)	Position(s)	Clinical significance
GRCh38/hg38 18p11.32-q23(chr18:148763-80252290)x3	copy number gain	See cases [RCV000052507]	Chr18:148763..80252290 [GRCh38] Chr18:148763..78010173 [GRCh37] Chr18:138763..76111164 [NCBI36] Chr18:18p11.32-q23	pathogenic
GRCh38/hg38 18q21.2-23(chr18:51190429-80252149)x1	copy number loss	See cases [RCV000135413]	Chr18:51190429..80252149 [GRCh38] Chr18:48716799..78010032 [GRCh37] Chr18:46970797..76111023 [NCBI36] Chr18:18q21.2-23	pathogenic
GRCh38/hg38 18p11.32-q23(chr18:136226-80256240)x3	copy number gain	See cases [RCV000143218]	Chr18:136226..80256240 [GRCh38] Chr18:136226..78014123 [GRCh37] Chr18:126226..76115097 [NCBI36] Chr18:18p11.32-q23	pathogenic
GRCh38/hg38 18q21.33-23(chr18:61576009-80252149)x1	copy number loss	See cases [RCV000135616]	Chr18:61576009..80252149 [GRCh38] Chr18:59243242..78010032 [GRCh37] Chr18:57394222..76111023 [NCBI36] Chr18:18q21.33-23	pathogenic
GRCh38/hg38 18q21.33-23(chr18:63306200-80252149)x1	copy number loss	See cases [RCV000135838]	Chr18:63306200..80252149 [GRCh38] Chr18:60973433..78010032 [GRCh37] Chr18:59124413..76111023 [NCBI36] Chr18:18q21.33-23	pathogenic
GRCh38/hg38 18q22.1-23(chr18:68830234-80254946)x1	copy number loss	See cases [RCV000137431]	Chr18:68830234..80254946 [GRCh38] Chr18:66497471..78012829 [GRCh37] Chr18:64648451..76113817 [NCBI36] Chr18:18q22.1-23	pathogenic
GRCh38/hg38 18q22.1-23(chr18:63988650-80252149)x1	copy number loss	See cases [RCV000053876]	Chr18:63988650..80252149 [GRCh38] Chr18:61655884..78010032 [GRCh37] Chr18:59806864..76111023 [NCBI36] Chr18:18q22.1-23	pathogenic
GRCh38/hg38 18q21.1-23(chr18:50068129-80252149)x3	copy number gain	See cases [RCV000050989]	Chr18:50068129..80252149 [GRCh38] Chr18:47594499..78010032 [GRCh37] Chr18:45848497..76111023 [NCBI36] Chr18:18q21.1-23	pathogenic
GRCh38/hg38 18q12.3-23(chr18:42651392-80254946)x3	copy number gain	See cases [RCV000138034]	Chr18:42651392..80254946 [GRCh38] Chr18:40231357..78012829 [GRCh37] Chr18:38485355..76113817 [NCBI36] Chr18:18q12.3-23	pathogenic
GRCh38/hg38 18q22.1-23(chr18:67772576-80252149)x1	copy number loss	See cases [RCV000136555]	Chr18:67772576..80252149 [GRCh38] Chr18:65439813..78010032 [GRCh37] Chr18:63590793..76111023 [NCBI36] Chr18:18q22.1-23	pathogenic
GRCh38/hg38 18q22.2-23(chr18:69650802-80254946)x1	copy number loss	See cases [RCV000138248]	Chr18:69650802..80254946 [GRCh38] Chr18:67318038..78012829 [GRCh37] Chr18:65469018..76113817 [NCBI36] Chr18:18q22.2-23	pathogenic
GRCh38/hg38 18q22.1-23(chr18:66649227-80254936)x1	copy number loss	See cases [RCV000138638]	Chr18:66649227..80254936 [GRCh38] Chr18:64316464..78012819 [GRCh37] Chr18:62467444..76113807 [NCBI36] Chr18:18q22.1-23	pathogenic
GRCh38/hg38 18q22.1-23(chr18:64747728-80254946)x1	copy number loss	See cases [RCV000138707]	Chr18:64747728..80254946 [GRCh38] Chr18:62414964..78012829 [GRCh37] Chr18:60565944..76113817 [NCBI36] Chr18:18q22.1-23	pathogenic
GRCh38/hg38 18q21.32-23(chr18:59996934-80254946)x1	copy number loss	See cases [RCV000139669]	Chr18:59996934..80254946 [GRCh38] Chr18:57664166..78012829 [GRCh37] Chr18:55815146..76113817 [NCBI36] Chr18:18q21.32-23	pathogenic
GRCh38/hg38 18q21.33-23(chr18:63195579-80234429)x3	copy number gain	See cases [RCV000052572]	Chr18:63195579..80234429 [GRCh38] Chr18:60862812..77992312 [GRCh37] Chr18:59013792..76093303 [NCBI36] Chr18:18q21.33-23	pathogenic
GRCh38/hg38 18q22.2-23(chr18:69288245-80252149)x1	copy number loss	See cases [RCV000053905]	Chr18:69288245..80252149 [GRCh38] Chr18:66955481..78010032 [GRCh37] Chr18:65106461..76111023 [NCBI36] Chr18:18q22.2-23	pathogenic
GRCh38/hg38 18q22.1-23(chr18:67686362-80252149)x3	copy number gain	See cases [RCV000142689]	Chr18:67686362..80252149 [GRCh38] Chr18:65353599..78010032 [GRCh37] Chr18:63504579..76111023 [NCBI36] Chr18:18q22.1-23	pathogenic\|likely pathogenic
GRCh38/hg38 18q22.3-23(chr18:72639340-80254946)x1	copy number loss	See cases [RCV000143196]	Chr18:72639340..80254946 [GRCh38] Chr18:70306575..78012829 [GRCh37] Chr18:68457555..76113817 [NCBI36] Chr18:18q22.3-23	pathogenic
GRCh38/hg38 18q21.31-23(chr18:56353040-80209986)x1	copy number loss	See cases [RCV000053873]	Chr18:56353040..80209986 [GRCh38] Chr18:54020271..77967869 [GRCh37] Chr18:52171269..76068860 [NCBI36] Chr18:18q21.31-23	pathogenic
GRCh38/hg38 18p11.32-q23(chr18:149089-80234391)x3	copy number gain	See cases [RCV000134110]	Chr18:149089..80234391 [GRCh38] Chr18:149089..77992274 [GRCh37] Chr18:139089..76093265 [NCBI36] Chr18:18p11.32-q23	pathogenic
GRCh38/hg38 18q22.2-23(chr18:69200589-80252149)x1	copy number loss	See cases [RCV000133824]	Chr18:69200589..80252149 [GRCh38] Chr18:66867826..78010032 [GRCh37] Chr18:65018806..76111023 [NCBI36] Chr18:18q22.2-23	pathogenic
GRCh38/hg38 18q22.1-23(chr18:66190016-80254946)x1	copy number loss	See cases [RCV000137808]	Chr18:66190016..80254946 [GRCh38] Chr18:63857253..78012829 [GRCh37] Chr18:62008233..76113817 [NCBI36] Chr18:18q22.1-23	pathogenic\|likely pathogenic
GRCh38/hg38 18q21.33-23(chr18:63756916-80254946)x1	copy number loss	See cases [RCV000139464]	Chr18:63756916..80254946 [GRCh38] Chr18:61424150..78012829 [GRCh37] Chr18:59575130..76113817 [NCBI36] Chr18:18q21.33-23	pathogenic
GRCh38/hg38 18q22.1-23(chr18:64747528-80252290)x3	copy number gain	See cases [RCV000052573]	Chr18:64747528..80252290 [GRCh38] Chr18:62414764..78010173 [GRCh37] Chr18:60565744..76111164 [NCBI36] Chr18:18q22.1-23	pathogenic
GRCh38/hg38 18q22.1-23(chr18:68340002-80256240)x1	copy number loss	See cases [RCV000140899]	Chr18:68340002..80256240 [GRCh38] Chr18:66007239..78014123 [GRCh37] Chr18:64158219..76115097 [NCBI36] Chr18:18q22.1-23	pathogenic
GRCh38/hg38 18q21.33-23(chr18:61613338-80252090)x1	copy number loss	See cases [RCV000141429]	Chr18:61613338..80252090 [GRCh38] Chr18:59280571..78009973 [GRCh37] Chr18:57431551..76110964 [NCBI36] Chr18:18q21.33-23	pathogenic
GRCh38/hg38 18p11.32-q23(chr18:148963-80252149)x3	copy number gain	See cases [RCV000051048]	Chr18:148963..80252149 [GRCh38] Chr18:148963..78010032 [GRCh37] Chr18:138963..76111023 [NCBI36] Chr18:18p11.32-q23	pathogenic
GRCh38/hg38 18p11.32-q23(chr18:148963-80244381)x3	copy number gain	See cases [RCV000052514]	Chr18:148963..80244381 [GRCh38] Chr18:148963..78002264 [GRCh37] Chr18:138963..76103255 [NCBI36] Chr18:18p11.32-q23	pathogenic
GRCh38/hg38 18q21.1-23(chr18:49199411-80254946)x3	copy number gain	See cases [RCV000137342]	Chr18:49199411..80254946 [GRCh38] Chr18:46725781..78012829 [GRCh37] Chr18:44979779..76113817 [NCBI36] Chr18:18q21.1-23	pathogenic
GRCh38/hg38 18q21.2-23(chr18:55179364-80254946)x1	copy number loss	See cases [RCV000137375]	Chr18:55179364..80254946 [GRCh38] Chr18:52846595..78012829 [GRCh37] Chr18:50997593..76113817 [NCBI36] Chr18:18q21.2-23	pathogenic
GRCh38/hg38 18p11.32-q23(chr18:149089-80254936)x3	copy number gain	See cases [RCV000139397]	Chr18:149089..80254936 [GRCh38] Chr18:149089..78012819 [GRCh37] Chr18:139089..76113807 [NCBI36] Chr18:18p11.32-q23	pathogenic
GRCh38/hg38 18q11.1-22.3(chr18:20962119-74691446)x3	copy number gain	See cases [RCV000143057]	Chr18:20962119..74691446 [GRCh38] Chr18:18542080..72403402 [GRCh37] Chr18:16796078..70532390 [NCBI36] Chr18:18q11.1-22.3	pathogenic
GRCh38/hg38 18p11.32-q23(chr18:148963-80252149)x3	copy number gain	See cases [RCV000148072]	Chr18:148963..80252149 [GRCh38] Chr18:148963..78010032 [GRCh37] Chr18:138963..76111023 [NCBI36] Chr18:18p11.32-q23	pathogenic
GRCh38/hg38 18q22.1-23(chr18:68417596-80252149)x1	copy number loss	See cases [RCV000136122]	Chr18:68417596..80252149 [GRCh38] Chr18:66084833..78010032 [GRCh37] Chr18:64235813..76111023 [NCBI36] Chr18:18q22.1-23	pathogenic
GRCh38/hg38 18q22.1-23(chr18:68563422-80254946)x1	copy number loss	See cases [RCV000137379]	Chr18:68563422..80254946 [GRCh38] Chr18:66230659..78012829 [GRCh37] Chr18:64381639..76113817 [NCBI36] Chr18:18q22.1-23	pathogenic
GRCh38/hg38 18q22.1-23(chr18:65658824-80254946)x1	copy number loss	See cases [RCV000137598]	Chr18:65658824..80254946 [GRCh38] Chr18:63326060..78012829 [GRCh37] Chr18:61477040..76113817 [NCBI36] Chr18:18q22.1-23	pathogenic
GRCh38/hg38 18q22.3-23(chr18:72043906-80254936)x1	copy number loss	See cases [RCV000138491]	Chr18:72043906..80254936 [GRCh38] Chr18:69711141..78012819 [GRCh37] Chr18:67862121..76113807 [NCBI36] Chr18:18q22.3-23	pathogenic
GRCh38/hg38 18q12.1-23(chr18:32123105-80252149)x3	copy number gain	See cases [RCV000136890]	Chr18:32123105..80252149 [GRCh38] Chr18:29703068..78010032 [GRCh37] Chr18:27957066..76111023 [NCBI36] Chr18:18q12.1-23	pathogenic
GRCh38/hg38 18q22.3-23(chr18:71067804-80252149)x1	copy number loss	See cases [RCV000135818]	Chr18:71067804..80252149 [GRCh38] Chr18:68735040..78010032 [GRCh37] Chr18:66886020..76111023 [NCBI36] Chr18:18q22.3-23	pathogenic
GRCh38/hg38 18p11.32-q23(chr18:53345-80209986)x3	copy number gain	See cases [RCV000052501]	Chr18:53345..80209986 [GRCh38] Chr18:53345..77967869 [GRCh37] Chr18:43345..76068860 [NCBI36] Chr18:18p11.32-q23	pathogenic
GRCh38/hg38 18p11.32-q23(chr18:118760-80254946)x3	copy number gain	See cases [RCV000138656]	Chr18:118760..80254946 [GRCh38] Chr18:118760..78012829 [GRCh37] Chr18:108760..76113817 [NCBI36] Chr18:18p11.32-q23	pathogenic\|conflicting data from submitters
GRCh38/hg38 18q21.2-23(chr18:51167159-80256240)x1	copy number loss	See cases [RCV000140925]	Chr18:51167159..80256240 [GRCh38] Chr18:48693529..78014123 [GRCh37] Chr18:46947527..76115097 [NCBI36] Chr18:18q21.2-23	pathogenic
GRCh38/hg38 18p11.32-q23(chr18:136227-80256240)x3	copy number gain	See cases [RCV000142244]	Chr18:136227..80256240 [GRCh38] Chr18:136227..78014123 [GRCh37] Chr18:126227..76115097 [NCBI36] Chr18:18p11.32-q23	pathogenic
GRCh38/hg38 18q21.32-23(chr18:59567681-80252149)x1	copy number loss	See cases [RCV000133689]	Chr18:59567681..80252149 [GRCh38] Chr18:57234913..78010032 [GRCh37] Chr18:55385893..76111023 [NCBI36] Chr18:18q21.32-23	pathogenic
GRCh38/hg38 18q22.3-23(chr18:72426712-80252149)x1	copy number loss	See cases [RCV000135539]	Chr18:72426712..80252149 [GRCh38] Chr18:70093947..78010032 [GRCh37] Chr18:68244927..76111023 [NCBI36] Chr18:18q22.3-23	pathogenic
GRCh38/hg38 18q21.33-23(chr18:61827111-80252149)x1	copy number loss	See cases [RCV000135567]	Chr18:61827111..80252149 [GRCh38] Chr18:59494344..78010032 [GRCh37] Chr18:57645324..76111023 [NCBI36] Chr18:18q21.33-23	pathogenic\|uncertain significance
GRCh38/hg38 18q22.1-23(chr18:65693588-80252149)x1	copy number loss	See cases [RCV000136911]	Chr18:65693588..80252149 [GRCh38] Chr18:63360824..78010032 [GRCh37] Chr18:61511804..76111023 [NCBI36] Chr18:18q22.1-23	pathogenic
GRCh38/hg38 18q22.1-23(chr18:64950938-80252149)x1	copy number loss	See cases [RCV000050985]	Chr18:64950938..80252149 [GRCh38] Chr18:62618174..78010032 [GRCh37] Chr18:60769154..76111023 [NCBI36] Chr18:18q22.1-23	pathogenic
GRCh38/hg38 18q22.1-23(chr18:66456349-80256240)x1	copy number loss	See cases [RCV000142176]	Chr18:66456349..80256240 [GRCh38] Chr18:64123586..78014123 [GRCh37] Chr18:62274566..76115097 [NCBI36] Chr18:18q22.1-23	pathogenic
GRCh38/hg38 18q22.1-23(chr18:68857904-80256240)x1	copy number loss	See cases [RCV000143557]	Chr18:68857904..80256240 [GRCh38] Chr18:66525141..78014123 [GRCh37] Chr18:64676121..76115097 [NCBI36] Chr18:18q22.1-23	pathogenic
GRCh38/hg38 18q21.31-23(chr18:56618038-80252149)x1	copy number loss	See cases [RCV000051032]	Chr18:56618038..80252149 [GRCh38] Chr18:54285269..78010032 [GRCh37] Chr18:52436267..76111023 [NCBI36] Chr18:18q21.31-23	pathogenic
GRCh38/hg38 18q11.1-23(chr18:20960320-80234429)x3	copy number gain	See cases [RCV000052543]	Chr18:20960320..80234429 [GRCh38] Chr18:18540281..77992312 [GRCh37] Chr18:16794279..76093303 [NCBI36] Chr18:18q11.1-23	pathogenic
GRCh38/hg38 18q11.1-23(chr18:20989762-80209986)x3	copy number gain	See cases [RCV000052549]	Chr18:20989762..80209986 [GRCh38] Chr18:18569723..77967869 [GRCh37] Chr18:16823721..76068860 [NCBI36] Chr18:18q11.1-23	pathogenic
GRCh38/hg38 18q21.2-23(chr18:53865057-80252149)x1	copy number loss	See cases [RCV000136674]	Chr18:53865057..80252149 [GRCh38] Chr18:51391427..78010032 [GRCh37] Chr18:49645425..76111023 [NCBI36] Chr18:18q21.2-23	pathogenic
GRCh38/hg38 18q21.2-23(chr18:52421052-80254946)x1	copy number loss	See cases [RCV000139134]	Chr18:52421052..80254946 [GRCh38] Chr18:49947422..78012829 [GRCh37] Chr18:48201420..76113817 [NCBI36] Chr18:18q21.2-23	pathogenic
GRCh38/hg38 18q21.2-23(chr18:53959828-80254936)x3	copy number gain	See cases [RCV000139496]	Chr18:53959828..80254936 [GRCh38] Chr18:51486198..78012819 [GRCh37] Chr18:49740196..76113807 [NCBI36] Chr18:18q21.2-23	pathogenic
GRCh38/hg38 18q12.3-23(chr18:40367455-80256240)x3	copy number gain	See cases [RCV000142227]	Chr18:40367455..80256240 [GRCh38] Chr18:37947419..78014123 [GRCh37] Chr18:36201417..76115097 [NCBI36] Chr18:18q12.3-23	pathogenic
GRCh38/hg38 18q22.3(chr18:72991780-73274099)x1	copy number loss	See cases [RCV000137851]	Chr18:72991780..73274099 [GRCh38] Chr18:70659015..70941334 [GRCh37] Chr18:68809995..69092314 [NCBI36] Chr18:18q22.3	uncertain significance
GRCh38/hg38 18q22.3-23(chr18:71872883-80254946)x3	copy number gain	See cases [RCV000139457]	Chr18:71872883..80254946 [GRCh38] Chr18:69540119..78012829 [GRCh37] Chr18:67691099..76113817 [NCBI36] Chr18:18q22.3-23	pathogenic
GRCh38/hg38 18q21.33-23(chr18:62999696-80209986)x1	copy number loss	See cases [RCV000053875]	Chr18:62999696..80209986 [GRCh38] Chr18:60666929..77967869 [GRCh37] Chr18:58817909..76068860 [NCBI36] Chr18:18q21.33-23	pathogenic
GRCh38/hg38 18q22.3(chr18:72267740-73676450)x3	copy number gain	See cases [RCV000054102]	Chr18:72267740..73676450 [GRCh38] Chr18:69934975..71343685 [GRCh37] Chr18:68085955..69494665 [NCBI36] Chr18:18q22.3	uncertain significance
Single allele	deletion	Deletion of long arm of chromosome 18 [RCV002280357]	Chr18:61490305..80247612 [GRCh38] Chr18:18q21.33-23	pathogenic
Single allele	deletion	Pulmonary valve stenosis [RCV002247713]	Chr18:69541066..80373285 [GRCh38] Chr18:18q22.2-23	pathogenic

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	2914
Count of miRNA genes:	1120
Interacting mature miRNAs:	1356
Transcripts:	ENST00000581011, ENST00000581862, ENST00000582571, ENST00000583405, ENST00000584544, ENST00000584671
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	adipose tissue	appendage	entire extraembryonic component
High
Medium	9		10	5	12	5	21	5		2	15	53				1
Low	50	16	62	24	31	25	99	18	23	13	426	86	1	9	19	3
Below cutoff	1198	1375	955	196	403	105	2269	1090	1606	100	435	972	93	1093	1320

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NR_034133	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC009455	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC079062	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC013370	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC034583	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC047643	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CP068260	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CS072445	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DA853038	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	KF456450	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	OA986935	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	OA986936	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	OA986937	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENST00000581011

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	18	73,154,058 - 73,264,480 (-)	Ensembl

RefSeq Acc Id:

ENST00000581862

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	18	73,158,822 - 73,264,478 (-)	Ensembl

RefSeq Acc Id:

ENST00000582571

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	18	73,250,293 - 73,264,474 (-)	Ensembl

RefSeq Acc Id:

ENST00000583405

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	18	73,200,628 - 73,264,445 (-)	Ensembl

RefSeq Acc Id:

ENST00000584544

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	18	73,151,241 - 73,264,303 (-)	Ensembl

RefSeq Acc Id:

ENST00000584671

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	18	73,255,598 - 73,264,468 (-)	Ensembl

RefSeq Acc Id:

ENST00000654686

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	18	73,254,596 - 73,264,478 (-)	Ensembl

RefSeq Acc Id:

ENST00000661525

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	18	73,169,330 - 73,264,478 (-)	Ensembl

RefSeq Acc Id:

ENST00000667943

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	18	73,251,465 - 73,264,478 (-)	Ensembl

RefSeq Acc Id:

ENST00000669547

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	18	73,160,014 - 73,264,347 (-)	Ensembl

RefSeq Acc Id:

NR_034133

RefSeq Status:

PREDICTED

Type:

NON-CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	18	73,154,058 - 73,264,498 (-)	NCBI
T2T-CHM13v2.0	18	73,375,458 - 73,485,954 (-)	NCBI

Sequence:

show sequence

TTCTCCTGCCTCAGCCTCCCGAGTAGCTGGAACTACAGGCGCCCGCCATGATGCCCGGCTCATT
TTCTGTGTTTTCAGTAGAGACGGGGTTTCACTGTGTTAGCCAGGAAAGTCTTGATCTCCTGACC
TCGTGATCCTGACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGCGAGCCACCGCGCCCGACA
GCAGTTATGAAGTTCTAAAAGCAAGTCTTAATCAGGAAGTGTCCTTGATCACCAACGGCTCGCC
CAGGCATGCTGGCTCTCTTCCACTTCCACCTTCCACCATGGGATGACGCAGTAAGAAGGCCATC
AGTAGATGCCAGTCCCTCAACCTTGAACTTTCCAGACGCAGAACTTTATGCCTCCATTTTCCTC
TGCTGCATGGCCCCAGGAGAGATTTTAATTAGCTTTCTAACCTTGGTCCAGATTGCACATGCAA
ATGGTAGAGGATGCAACACCCCCGCTTGTGGAGCTGCCGCTTGTGTCTGGCATGAAAATTCACA
AGAAGAGAGGAAATACTGAGGAGAAAATGGCAGATTGTGTTTGCTGAATTTGATTGACGAAGAA
GTCACCATGAAAATCACAGTGAACCATTTGGAAAGCAAACTGCCAAAAAATAATAGTTAGTCAT
GCTCTCAGGCTGGTTGTTTTGGCTGTTGTGGGTTTCTTGCATTTCCAGATGATTGCAAAGAGCT
GTTTCTCAATTTCTGCAACAAGTGCCAGCTGAAATTTTGGTACCAGTTTCATTAAATATGTAGA
ACAATTTGAGCCTGAGTGAGTTCTGTGGAGCCCATACTACCTGCGATTCAAGCCAGCAACCTTG
GAATCTCCCTGAACAATTTCTATGGTGTCCAATCACATTTGCAATCACTCCCCACACTCAGTAG
GTTCTGCCCCCACATCATTTCTTTTCTCTATCCTCTTTCCCAGCTTTATAATATGACTTAGTTC
AAGCCCTAATCACTGGATTATTCAAAGTCCCTTAACAGGTTAATTCCTACTGTGATCAACACTT
TAAAGGAAGGCAATAGGGCCAGGCATGGTGGCTCACGGCTGTAATCCCAGCACTTTGGGAGGCT
GAGGCGAGTGGATCACAAGGTCGGGAGTTTGAGACCAGCCTGACTAACACAGTGAAACCCCGAC
TCTACTAAAAATACAAAAAATTAGCCAGGTGTGGTCGTGGGTACCTGTAGTCCCAGCTACTAGG
GAGGCTGAGGCAGGAGAATGGCGTGAACCCGAGAGGCGGAGCTTGCAGTGAGCCAAGATTACGC
CACTGCACTCCAGCCTGGGTGACGGAGCGAGACTCCATCTCAAAAAAAATAAAAAATAAATAAA
ACAGAAAGGCAATGGCTATCCCAAATTGCTGAAGCCTTTGCTAAAAGCACAGACAGAAAACAAC
AATATGGTGATGTTTGTGTTAAACAAATGTTATTGATTCTAGGACACAGGTCAGATGGCAAATA
GTCAAACTCAAATGTTGATCCCAGGGGTGGCTGTATCATCACTAAGGCCAAATCACAACTTTGA
CTGGTCTCATGGGAACACAGATCTTGGGTTTGGAAAGAGCACAGGCCTGGCCATGGGAATGGAC
ACAGGGTAATTTTAAGATGACTAGAGGTTCCTCAAACCCTAAAAGTACCACTGAACCTTGTTTA
AAGCTAAAATGGCTCCTAAATGATAGACACGTTTCTCAGTTATCTCTGCAAACTGAAGATCCTA
TCAGCCTGTTCAGGGTCTCACAGGCCTCTGGGTTTGTACATGATGTCCCTACAGTGGCGATGGG
GACTGATGAGAGCCACCGTTCCCATTGGAGGAGGGCAAGCTGCCACTGAGTGTCAGCTGCTGGA
GTAAACATCCAATCACATGTGTACCTGTATCCTATGGATATTGGCTTCCCCTCATACAACTTGT
TGTTCCTTTGTTTTCCATTCCTGACTATATTTGAATCTTTCTTGGATTTCCAGGAAACATCTGA
CTGCTTTCCTATGCCACTTCATACCCAAGAGAAGCTCAGGGAGATCCTTTAAGGTCCTTTATGC
CCATTATGATAGTACATGAATAGGTAAATGTACCACTGCTCCCTGTACTTCTTGGATAATGCAC
AAATAGTAAGACAGTCTCGCAACCAGCAGCCTAGACAGCCCAAATATGTGAAACCAAAACAGCT
TGATCTTCCAGACCTGTTCTGACTCCTTGAGTCTTAAATCTCCAAGCCTCTTGAATGTTTCACC
CACAGCCTTCCCTTTGGGATCTGGCATGGGACAGGAAGGGCAGAGAAGGGCCTGGGGCTTTTCC
TCAGGGATCCACCACAGTCTAGGCCAGTGGGTGGCAAACTTTTTCTGCAAAGGATCAGCTGGGA
GATAGTTTCAACTTTGTAGTCTCGTCGCAGCTACTCTACTCGACTCTGCCACTGGAGTGTGAAT
GCAGTCATGAATAAAAGAATGAAAGTTTTCCAGTGAAACTTTAGTCACAAAAACAGTCTGCAGG
CTGTGTCTGGCCCGTGGGCTTTGGTTTGCTGGCCTGCGGGCTCCTAGAAGGCTCTGACTTTATC
CCTCTATGAGGGAAAGCAGGTTTTGGGGTATTCTCCCAAATCTTTATACCTTATGTCTGTGTCT
CTTTTTAAATTAAAAGTAAAATTTAGGCCAAAAAAAAAAAAAAAAAAAAA

hide sequence

Protein Sequences


GenBank Protein	CAI93583	(Get FASTA)	NCBI Sequence Viewer

Additional Information

External Database Links

Database	Acc Id	Source(s)
COSMIC	LINC02864	COSMIC
Ensembl Genes	ENSG00000263711	Ensembl, ENTREZGENE
Ensembl Transcript	ENST00000581011	ENTREZGENE
GTEx	ENSG00000263711	GTEx
HGNC ID	HGNC:54480	ENTREZGENE
Human Proteome Map	LINC02864	Human Proteome Map
NCBI Gene	LINC02864	ENTREZGENE
RNAcentral	URS000075EA6E	RNACentral

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Human Phenotype Annotations - ClinVar

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Imported Disease Annotations - ClinVar

Imported Human Phenotype Annotations - ClinVar