VPS45 (vacuolar protein sorting 45 homolog)

Gene: VPS45 (vacuolar protein sorting 45 homolog) Sus scrofa

Analyze

Symbol:

VPS45

Name:

vacuolar protein sorting 45 homolog

RGD ID:

14279378

Description:

INVOLVED IN intracellular protein transport (inferred); protein transport (inferred); vesicle-mediated transport (inferred); ASSOCIATED WITH Familial Myelofibrosis (ortholog); gastrointestinal stromal tumor (ortholog); genetic disease (ortholog); FOUND IN Golgi apparatus (ortholog); synaptic vesicle (ortholog)

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

vacuolar protein sorting-associated protein 45

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	98,939,584 - 99,010,585 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	4	98,939,585 - 99,010,554 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	108,213,422 - 108,285,082 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Familial Myelofibrosis (ISO)

gastrointestinal stromal tumor (ISO)

genetic disease (ISO)

immunodeficiency 42 (ISO)

MHC class II deficiency (ISO)

parathyroid carcinoma (ISO)

severe congenital neutropenia 3 (ISO)

severe congenital neutropenia 5 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

intracellular protein transport (IEA)

protein transport (IEA)

vesicle-mediated transport (IEA)

Cellular Component

cytoplasm (IEA)

endomembrane system (IEA)

endosome membrane (IEA)

Golgi apparatus (ISO)

Golgi membrane (IEA)

intracellular membrane-bounded organelle (IEA)

membrane (IEA)

synaptic vesicle (ISO)

Molecular Function

protein binding (ISO)

References

Additional References at PubMed

PMID:14681463	PMID:17145712	PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

VPS45
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	98,939,584 - 99,010,585 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	4	98,939,585 - 99,010,554 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	108,213,422 - 108,285,082 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

VPS45
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	150,067,382 - 150,145,329 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	150,067,279 - 150,145,329 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	150,039,439 - 150,117,507 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	148,305,966 - 148,384,129 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	1	146,852,935 - 146,930,577	NCBI
Celera	1	123,155,097 - 123,233,224 (+)	NCBI		Celera
Cytogenetic Map	1	q21.2	NCBI
HuRef	1	121,419,253 - 121,497,382 (+)	NCBI		HuRef
CHM1_1	1	151,435,419 - 151,513,453 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	149,191,963 - 149,270,002 (+)	NCBI		T2T-CHM13v2.0

Vps45
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	95,907,144 - 95,969,715 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	95,907,144 - 95,965,778 (-)	Ensembl		GRCm39 Ensembl
GRCm38	3	95,999,832 - 96,059,661 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	95,999,832 - 96,058,466 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	3	95,803,755 - 95,862,378 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	3	96,085,265 - 96,143,860 (-)	NCBI		MGSCv36	mm8
Celera	3	97,433,896 - 97,493,930 (-)	NCBI		Celera
Cytogenetic Map	3	F2.1	NCBI
cM Map	3	41.65	NCBI

Vps45
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	186,244,839 - 186,305,177 (-)	NCBI		GRCr8
mRatBN7.2	2	183,555,919 - 183,616,312 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	183,555,921 - 183,616,295 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	191,219,584 - 191,279,748 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	189,024,016 - 189,083,974 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	183,852,136 - 183,912,300 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	198,123,747 - 198,184,739 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	198,123,748 - 198,184,739 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	217,613,523 - 217,674,338 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	190,799,602 - 190,859,954 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	2	190,762,356 - 190,822,708 (-)	NCBI
Celera	2	176,084,339 - 176,144,558 (-)	NCBI		Celera
Cytogenetic Map	2	q34	NCBI

Vps45
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955413	614,018 - 680,564 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955413	615,510 - 680,564 (-)	NCBI	ChiLan1.0	ChiLan1.0

VPS45
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	99,693,326 - 99,780,531 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	99,442,511 - 99,529,678 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	125,412,566 - 125,490,615 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	129,065,430 - 129,142,990 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	129,063,462 - 129,142,990 (+)	Ensembl	panpan1.1		panPan2

VPS45
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	17	59,327,781 - 59,402,172 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	17	59,327,806 - 59,397,811 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	17	58,774,865 - 58,849,260 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	17	60,323,934 - 60,398,328 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	17	60,323,956 - 60,398,341 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	17	59,173,467 - 59,247,924 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	17	59,257,213 - 59,331,814 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	17	59,984,519 - 60,058,877 (+)	NCBI		UU_Cfam_GSD_1.0

Vps45
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	21,350,412 - 21,404,733 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936580	380,788 - 435,142 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936580	380,794 - 435,115 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

VPS45
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Vero_WHO_p1.0	NW_023666038	13,152,158 - 13,236,004 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Vps45
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624772	17,818,039 - 17,889,228 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624772	17,817,958 - 17,885,107 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in VPS45
1505 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	hemolymphoid system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system
High
Medium	2		3	1		12
Low	8	4		4	2	11	2	3	3
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001244994	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000022	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK343958	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01019673	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSSCT00000007298 ⟹ ENSSSCP00000007103

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	4	98,939,584 - 99,010,585 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000053229 ⟹ ENSSSCP00000047290

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	4	98,939,595 - 99,010,525 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000060515 ⟹ ENSSSCP00000045873

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	4	98,939,593 - 99,010,527 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000071352 ⟹ ENSSSCP00000068019

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	4	98,939,594 - 99,010,525 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000071423 ⟹ ENSSSCP00000066748

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	4	98,967,990 - 99,010,585 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000090515 ⟹ ENSSSCP00000074481

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	4	99,009,538 - 99,010,585 (-)	Ensembl

RefSeq Acc Id:

NM_001244994 ⟹ NP_001231923

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	4	98,939,585 - 99,010,554 (-)	NCBI

Sequence:

show sequence

AAGCCGCAGAGACCCGGCCAAGAGGCGGGGGGTTAATCTAGCAAGAAAAAAGGGGGGCGGGAAG
GGCTATAGGGCTAACCTGTCAATTCGCCACCATGAACGTAGTTTTTGCTGTGAAGCAGTACATT
TCCAAAATGATAGAGGACAGCGGACCGGGTATGAAAGTACTTCTCATGGATAAGGAGACGACTG
GCATCGTGAGTATGGTATACACACAATCGGAAATTCTCCAGAAGGAAGTGTACCTTTTTGAACG
CATTGATTCTCAAAATCGAGAGATCATGAAACACCTCAAGGCAATTTGTTTTCTTCGACCTACG
AAGGAGAATGTGGATTATTTGATTCAGGAGCTCCGAAGACCTAAATACAGTATATATTTTATTT
ATTTCAGTAACGTGATCAGCAAGAGTGATGTGAAGTCATTAGCTGAAGCTGATGAACAGGAAGT
TGTGGCTGAGGTTCAGGAATTTTATGGTGATTATATTGCTGTGAATCCTCATTTGTTTTCCCTC
AATATTTTGGGTTGCTGCCAGGGTCGAAATTGGGATCCAGCCCAGCTATCCAGAACAACTCAAG
GACTGACAGCTCTCCTTTTATCTCTAAAGAAATGTCCCATGATTCGTTACCAGCTTTCATCTGA
GGCAGCAAAGAGACTTGCAGAATGTGTTAAGCAAGTGATAACTAAAGAATATGAACTGTTTGAA
TTCCGGCGGACTGAGGTTCCTCCATTGCTACTGATTTTAGATCGCTGCGATGATGCCATCACCC
CATTGCTAAACCAGTGGACATATCAGGCCATGGTCCATGAACTACTGGGCATAAACAACAATCG
GATTGATCTTTCCAGAGTGCCAGGGATCAGTAAAGACTTGAGAGAGGTGGTCCTATCTGCAGAA
AACGATGAATTCTATGCTAACAATATGTACCTGAACTTTGCTGAGATTGGTAGCAACATAAAGA
ATCTCATGGAAGACTTTCAGAAGAAGAAACCAAAAGAACAGCAAAAACTAGAATCAATAGCAGA
CATGAAGGCCTTTGTGGAGAACTACCCACAGTTCAAGAAGATGTCTGGGACTGTATCAAAGCAC
GTAACGGTGGTTGGAGAGCTGTCTCGGTTGGTCAGTGAGCGGAATCTGCTGGAGGTTTCGGAGG
TTGAGCAAGAATTGGCCTGTCAAAATGACCATTCTAGTGCTCTCCAGAATGTAAAGAGGCTCCT
GCAGAACCCCAAAGTGACAGAGTTTGATGCTGCCCGCCTGGTAATGCTTTATGCTCTACATTAT
GAGCGACACAGCAGCAATAGCCTACCAGGATTAATGATGGACCTCAGGAATAAAGGTGTTTCTG
AGAAGTATCGAAAGCTTGTGTCTGCAGTTGTTGAATATGGTGGTAAACGGGTCAGAGGAAGCGA
CCTCTTCAGCCCCAAAGATGCTGTGGCTATTACCAAACAGTTCCTCAAAGGATTGAAGGGAGTA
GAAAATGTATATACTCAGCATCAACCTTTCTTACATGAGACCTTGGACCATCTCATCAAAGGAA
AGCTTAAGGAAAACCTATATCCTTATCTAGGCCCCAGCACACTCAGAGACAGACCTCAGGATAT
CATTGTGTTTATAATTGGAGGAGCCACCTATGAAGAGGCTCTAACAGTTTATAACTTGAACCGT
ACCACTCCTGGAGTGAGGATTGTCCTGGGAGGAACTACAGTGCACAACACAAAAAGTTTCTTAG
AGGAAGTTCTGGCTTCTGGACTGCACAGCCGAAGCAAGGAGAGCTCTCAAGTCACATCAAGGTC
AGCAAGCAGAAGATGAAATGGTGATGGAGAGGTGAGCAGAATGGCGCAACTTCCTCTCTTGAGG
GGCCGCAGGCTTTCTCCACTGACCAGAGCTGTTGGAAAAGAGCCTTGGGTTTTGTGCTTATTGA
TATAACCCATCTCCAGGTAGTCTGCTGATTCCTGAACTGTTGTCACAGACATCAAGACTCCAGA
GGGATGAGCTGAGAATAAGTCCGAGCCCATCCCAACCCACTTTTCTCATAGTTTCTTTATCAAA
TAAGTATTCCTTGTATTTGATAGCACAATCACTTTAGTTTCTGATGAATTTTGTTGGGATCTTA
CTTGAGAAAAGGGTCATCAGAGCTTAGAGGAGTTTTAAAAAGTAAAAATTAAATGTACATGCTA
TAAACTCTCTCTTCTCTTGACCCCTTTTACTTTTCACTAACCACATTCCCATGCAACTCATTTC
TGAAAACTTATCATATTTCTGTAAGAAACACCTAAAAATTGTTTGTCCCTAAACTGCAATTCTC
TGTGGTACTGAGAAACTATGTATAGCTACAATAAAAATCCACTTTGTGAAAAGAT

hide sequence

Protein Sequences


Protein RefSeqs	NP_001231923	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000007103
	ENSSSCP00000007103.3
	ENSSSCP00000045873.1
	ENSSSCP00000047290.1
	ENSSSCP00000066748.1
	ENSSSCP00000068019.1
	ENSSSCP00000074481.1
	ENSSSCP00005016667.1
	ENSSSCP00005016695.1
	ENSSSCP00005016713.1
	ENSSSCP00005016730.1
	ENSSSCP00005016757.1
	ENSSSCP00005016782.1
	ENSSSCP00005016800.1
	ENSSSCP00015001282.1
	ENSSSCP00015001290.1
	ENSSSCP00015001299.1
	ENSSSCP00015001343.1
	ENSSSCP00015001353.1
	ENSSSCP00015001363.1
	ENSSSCP00015001374.1
	ENSSSCP00015001399.1
	ENSSSCP00025038799.1
	ENSSSCP00025038912.1
	ENSSSCP00025039045.1
	ENSSSCP00025039160.1
	ENSSSCP00025039263.1
	ENSSSCP00025039367.1
	ENSSSCP00030033694.1
	ENSSSCP00030033706.1
	ENSSSCP00030033733.1
	ENSSSCP00030033748.1
	ENSSSCP00030033772.1
	ENSSSCP00030033799.1
	ENSSSCP00030033820.1
	ENSSSCP00030033831.1
	ENSSSCP00030033844.1
	ENSSSCP00035028502.1
	ENSSSCP00035028505.1
	ENSSSCP00035028509.1
	ENSSSCP00035028518.1
	ENSSSCP00035028530.1
	ENSSSCP00035028533.1
	ENSSSCP00035028551.1
	ENSSSCP00035028565.1
	ENSSSCP00035028572.1
	ENSSSCP00040021201.1
	ENSSSCP00040021235.1
	ENSSSCP00040021273.1
	ENSSSCP00040021344.1
	ENSSSCP00040021443.1
	ENSSSCP00040021491.1
	ENSSSCP00045041196.1
	ENSSSCP00050047449.1
	ENSSSCP00050047467.1
	ENSSSCP00050047486.1
	ENSSSCP00050047513.1
	ENSSSCP00050047561.1
	ENSSSCP00050047575.1
	ENSSSCP00050047589.1
	ENSSSCP00050047598.1
	ENSSSCP00050047628.1
	ENSSSCP00055045476.1
	ENSSSCP00055045547.1
	ENSSSCP00055045615.1
	ENSSSCP00055045679.1
	ENSSSCP00055045741.1
	ENSSSCP00055045813.1
	ENSSSCP00055045864.1
	ENSSSCP00060013618.1
	ENSSSCP00060013619.1
	ENSSSCP00060013626.1
	ENSSSCP00060013627.1
	ENSSSCP00060013629.1
	ENSSSCP00060013633.1
	ENSSSCP00060013644.1
	ENSSSCP00065043963.1
	ENSSSCP00065043966.1
	ENSSSCP00065043983.1
	ENSSSCP00065043996.1
	ENSSSCP00065044012.1
	ENSSSCP00065044024.1
	ENSSSCP00065044042.1
	ENSSSCP00070001836.1
	ENSSSCP00070001844.1
	ENSSSCP00070001863.1

RefSeq Acc Id:

NP_001231923 ⟸ NM_001244994

- UniProtKB:

F1SDG5 (UniProtKB/TrEMBL), A0A4X1SHS6 (UniProtKB/TrEMBL), A0A8D1ADN9 (UniProtKB/TrEMBL), A0A8D0MDV8 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MNVVFAVKQYISKMIEDSGPGMKVLLMDKETTGIVSMVYTQSEILQKEVYLFERIDSQNREIMK
HLKAICFLRPTKENVDYLIQELRRPKYSIYFIYFSNVISKSDVKSLAEADEQEVVAEVQEFYGD
YIAVNPHLFSLNILGCCQGRNWDPAQLSRTTQGLTALLLSLKKCPMIRYQLSSEAAKRLAECVK
QVITKEYELFEFRRTEVPPLLLILDRCDDAITPLLNQWTYQAMVHELLGINNNRIDLSRVPGIS
KDLREVVLSAENDEFYANNMYLNFAEIGSNIKNLMEDFQKKKPKEQQKLESIADMKAFVENYPQ
FKKMSGTVSKHVTVVGELSRLVSERNLLEVSEVEQELACQNDHSSALQNVKRLLQNPKVTEFDA
ARLVMLYALHYERHSSNSLPGLMMDLRNKGVSEKYRKLVSAVVEYGGKRVRGSDLFSPKDAVAI
TKQFLKGLKGVENVYTQHQPFLHETLDHLIKGKLKENLYPYLGPSTLRDRPQDIIVFIIGGATY
EEALTVYNLNRTTPGVRIVLGGTTVHNTKSFLEEVLASGLHSRSKESSQVTSRSASRR

hide sequence

RefSeq Acc Id:

ENSSSCP00000074481 ⟸ ENSSSCT00000090515

RefSeq Acc Id:

ENSSSCP00000045873 ⟸ ENSSSCT00000060515

RefSeq Acc Id:

ENSSSCP00000068019 ⟸ ENSSSCT00000071352

RefSeq Acc Id:

ENSSSCP00000066748 ⟸ ENSSSCT00000071423

RefSeq Acc Id:

ENSSSCP00000007103 ⟸ ENSSSCT00000007298

RefSeq Acc Id:

ENSSSCP00000047290 ⟸ ENSSSCT00000053229

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000006661	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00005016576	UniProtKB/TrEMBL
	ENSSSCG00015002774	UniProtKB/TrEMBL
	ENSSSCG00025064462	UniProtKB/TrEMBL
	ENSSSCG00030052743	UniProtKB/TrEMBL
	ENSSSCG00035052608	UniProtKB/TrEMBL
	ENSSSCG00040037936	UniProtKB/TrEMBL
	ENSSSCG00045033973	UniProtKB/TrEMBL
	ENSSSCG00050077957	UniProtKB/TrEMBL
	ENSSSCG00055028125	UniProtKB/TrEMBL
	ENSSSCG00060023436	UniProtKB/TrEMBL
	ENSSSCG00065072769	UniProtKB/TrEMBL
	ENSSSCG00070001133	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000007298	ENTREZGENE
	ENSSSCT00000007298.5	UniProtKB/TrEMBL
	ENSSSCT00000053229.3	UniProtKB/TrEMBL
	ENSSSCT00000060515.3	UniProtKB/TrEMBL
	ENSSSCT00000071352.2	UniProtKB/TrEMBL
	ENSSSCT00000071423.2	UniProtKB/TrEMBL
	ENSSSCT00000090515.2	UniProtKB/TrEMBL
	ENSSSCT00005027418.1	UniProtKB/TrEMBL
	ENSSSCT00005027453.1	UniProtKB/TrEMBL
	ENSSSCT00005027471.1	UniProtKB/TrEMBL
	ENSSSCT00005027490.1	UniProtKB/TrEMBL
	ENSSSCT00005027518.1	UniProtKB/TrEMBL
	ENSSSCT00005027559.1	UniProtKB/TrEMBL
	ENSSSCT00005027593.1	UniProtKB/TrEMBL
	ENSSSCT00015003750.1	UniProtKB/TrEMBL
	ENSSSCT00015003769.1	UniProtKB/TrEMBL
	ENSSSCT00015003801.1	UniProtKB/TrEMBL
	ENSSSCT00015003891.1	UniProtKB/TrEMBL
	ENSSSCT00015003910.1	UniProtKB/TrEMBL
	ENSSSCT00015003932.1	UniProtKB/TrEMBL
	ENSSSCT00015003948.1	UniProtKB/TrEMBL
	ENSSSCT00015004008.1	UniProtKB/TrEMBL
	ENSSSCT00025088785.1	UniProtKB/TrEMBL
	ENSSSCT00025088989.1	UniProtKB/TrEMBL
	ENSSSCT00025089261.1	UniProtKB/TrEMBL
	ENSSSCT00025089479.1	UniProtKB/TrEMBL
	ENSSSCT00025089706.1	UniProtKB/TrEMBL
	ENSSSCT00025089912.1	UniProtKB/TrEMBL
	ENSSSCT00030073623.1	UniProtKB/TrEMBL
	ENSSSCT00030073646.1	UniProtKB/TrEMBL
	ENSSSCT00030073694.1	UniProtKB/TrEMBL
	ENSSSCT00030073718.1	UniProtKB/TrEMBL
	ENSSSCT00030073762.1	UniProtKB/TrEMBL
	ENSSSCT00030073810.1	UniProtKB/TrEMBL
	ENSSSCT00030073860.1	UniProtKB/TrEMBL
	ENSSSCT00030073885.1	UniProtKB/TrEMBL
	ENSSSCT00030073907.1	UniProtKB/TrEMBL
	ENSSSCT00035070262.1	UniProtKB/TrEMBL
	ENSSSCT00035070275.1	UniProtKB/TrEMBL
	ENSSSCT00035070282.1	UniProtKB/TrEMBL
	ENSSSCT00035070307.1	UniProtKB/TrEMBL
	ENSSSCT00035070339.1	UniProtKB/TrEMBL
	ENSSSCT00035070343.1	UniProtKB/TrEMBL
	ENSSSCT00035070375.1	UniProtKB/TrEMBL
	ENSSSCT00035070409.1	UniProtKB/TrEMBL
	ENSSSCT00035070426.1	UniProtKB/TrEMBL
	ENSSSCT00040051063.1	UniProtKB/TrEMBL
	ENSSSCT00040051157.1	UniProtKB/TrEMBL
	ENSSSCT00040051245.1	UniProtKB/TrEMBL
	ENSSSCT00040051435.1	UniProtKB/TrEMBL
	ENSSSCT00040051685.1	UniProtKB/TrEMBL
	ENSSSCT00040051791.1	UniProtKB/TrEMBL
	ENSSSCT00045058869.1	UniProtKB/TrEMBL
	ENSSSCT00050107343.1	UniProtKB/TrEMBL
	ENSSSCT00050107374.1	UniProtKB/TrEMBL
	ENSSSCT00050107405.1	UniProtKB/TrEMBL
	ENSSSCT00050107440.1	UniProtKB/TrEMBL
	ENSSSCT00050107532.1	UniProtKB/TrEMBL
	ENSSSCT00050107550.1	UniProtKB/TrEMBL
	ENSSSCT00050107566.1	UniProtKB/TrEMBL
	ENSSSCT00050107584.1	UniProtKB/TrEMBL
	ENSSSCT00050107633.1	UniProtKB/TrEMBL
	ENSSSCT00055056857.1	UniProtKB/TrEMBL
	ENSSSCT00055056942.1	UniProtKB/TrEMBL
	ENSSSCT00055057023.1	UniProtKB/TrEMBL
	ENSSSCT00055057107.1	UniProtKB/TrEMBL
	ENSSSCT00055057181.1	UniProtKB/TrEMBL
	ENSSSCT00055057263.1	UniProtKB/TrEMBL
	ENSSSCT00055057331.1	UniProtKB/TrEMBL
	ENSSSCT00060031802.1	UniProtKB/TrEMBL
	ENSSSCT00060031806.1	UniProtKB/TrEMBL
	ENSSSCT00060031817.1	UniProtKB/TrEMBL
	ENSSSCT00060031821.1	UniProtKB/TrEMBL
	ENSSSCT00060031824.1	UniProtKB/TrEMBL
	ENSSSCT00060031830.1	UniProtKB/TrEMBL
	ENSSSCT00060031844.1	UniProtKB/TrEMBL
	ENSSSCT00065100089.1	UniProtKB/TrEMBL
	ENSSSCT00065100096.1	UniProtKB/TrEMBL
	ENSSSCT00065100131.1	UniProtKB/TrEMBL
	ENSSSCT00065100153.1	UniProtKB/TrEMBL
	ENSSSCT00065100178.1	UniProtKB/TrEMBL
	ENSSSCT00065100195.1	UniProtKB/TrEMBL
	ENSSSCT00065100228.1	UniProtKB/TrEMBL
	ENSSSCT00070002191.1	UniProtKB/TrEMBL
	ENSSSCT00070002201.1	UniProtKB/TrEMBL
	ENSSSCT00070002221.1	UniProtKB/TrEMBL
Gene3D-CATH	1.25.40.60	UniProtKB/TrEMBL
	3.40.50.1910	UniProtKB/TrEMBL
	3.40.50.2060	UniProtKB/TrEMBL
InterPro	Sec-1-like_dom1	UniProtKB/TrEMBL
	Sec-1-like_dom2	UniProtKB/TrEMBL
	Sec-1-like_dom3a	UniProtKB/TrEMBL
	Sec1-like	UniProtKB/TrEMBL
	Sec1-like_sf	UniProtKB/TrEMBL
KEGG Report	ssc:100514766	UniProtKB/TrEMBL
NCBI Gene	VPS45	ENTREZGENE
PANTHER	PTHR11679	UniProtKB/TrEMBL
	VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 45	UniProtKB/TrEMBL
Pfam	Sec1	UniProtKB/TrEMBL
PIRSF	VPS45_Sec1	UniProtKB/TrEMBL
Superfamily-SCOP	SSF56815	UniProtKB/TrEMBL
UniProt	A0A4X1SHS6	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1SHV4_PIG	UniProtKB/TrEMBL
	A0A4X1SHY1_PIG	UniProtKB/TrEMBL
	A0A5G2RNL2_PIG	UniProtKB/TrEMBL
	A0A8D0IWM9_PIG	UniProtKB/TrEMBL
	A0A8D0MC35_PIG	UniProtKB/TrEMBL
	A0A8D0MDV8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0T6F0_PIG	UniProtKB/TrEMBL
	A0A8D0TTM9_PIG	UniProtKB/TrEMBL
	A0A8D0XBF8_PIG	UniProtKB/TrEMBL
	A0A8D1ADN9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1CXI4_PIG	UniProtKB/TrEMBL
	A0A8D1EDG0_PIG	UniProtKB/TrEMBL
	A0A8D1P8K5_PIG	UniProtKB/TrEMBL
	A0A8D1S6E5_PIG	UniProtKB/TrEMBL
	A0A8D1US68_PIG	UniProtKB/TrEMBL
	A0A8D2BEG6_PIG	UniProtKB/TrEMBL
	F1SDG5	ENTREZGENE
UniProt Secondary	A0A287APK1	UniProtKB/TrEMBL
	A0A287ATM9	UniProtKB/TrEMBL
	A0A5G2QPC4	UniProtKB/TrEMBL
	A0A5G2RBM7	UniProtKB/TrEMBL
	F1SDG5	UniProtKB/TrEMBL
VGNC ID	VGNC:94856	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM