C2 (complement C2) - Rat Genome Database

Name: C2
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: C2 (complement C2) Sus scrofa

Analyze

Symbol:

Name:

complement C2

RGD ID:

14216932

Description:

ENCODES a protein that exhibits serine-type endopeptidase activity (inferred); serine-type peptidase activity (inferred); INVOLVED IN response to nutrient (ortholog); ASSOCIATED WITH age related macular degeneration 14 (ortholog); Alzheimer's disease (ortholog); atypical hemolytic-uremic syndrome (ortholog); FOUND IN classical-complement-pathway C3/C5 convertase complex (inferred); extracellular exosome (inferred); extracellular region (inferred); INTERACTS WITH bis(2-chloroethyl) sulfide; deoxynivalenol

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	C2 (complement C2)	HGNC	EggNOG, Ensembl, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	C2 (complement C2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	C2 (complement C2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	C2 (complement C2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	C2 (complement C2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	C2 (complement C2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	C2 (complement C2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	C2 (complement C2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	C2 (complement C2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	CFB (complement factor B)	HGNC	Treefam

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	23,995,982 - 24,033,930 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	7	24,020,590 - 24,034,042 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	27,778,160 - 27,791,919 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Alzheimer's disease (ISO)

anterior uveitis (ISO)

atypical hemolytic-uremic syndrome (ISO)

Chronic Hepatitis B (ISO)

complement component 2 deficiency (ISO)

Complement Factor B Deficiency (ISO)

COVID-19 (ISO)

dermatomyositis (ISO)

focal segmental glomerulosclerosis (ISO)

focal segmental glomerulosclerosis 1 (ISO)

IgA glomerulonephritis (ISO)

irritant dermatitis (ISO)

kidney disease (ISO)

macular degeneration (ISO)

otitis media (ISO)

Polypoidal Choroidal Vasculopathy (ISO)

proteasome-associated autoinflammatory syndrome 1 (ISO)

psoriasis (ISO)

systemic lupus erythematosus (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

bis(2-chloroethyl) sulfide (EXP)

deoxynivalenol (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

complement activation (IBA,IEA)

complement activation, classical pathway (IEA)

innate immune response (IEA)

positive regulation of apoptotic cell clearance (IEA)

proteolysis (IEA)

response to bacterium (IBA,IEA)

response to nutrient (ISO)

Cellular Component

classical-complement-pathway C3/C5 convertase complex (IEA)

extracellular exosome (IEA)

extracellular region (IEA)

Molecular Function

protein binding (ISO)

serine-type endopeptidase activity (IEA)

serine-type peptidase activity (IEA)

References

Additional References at PubMed

PMID:14681463	PMID:17145712	PMID:22301074	PMID:22763733	PMID:30032202

Genomics

Comparative Map Data

C2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	23,995,982 - 24,033,930 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	7	24,020,590 - 24,034,042 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	27,778,160 - 27,791,919 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

C2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	31,897,783 - 31,945,672 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	31,897,785 - 31,945,673 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	6	31,865,560 - 31,913,449 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	32,003,473 - 32,021,427 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	6	32,003,472 - 32,021,427	NCBI
Celera	6	33,495,068 - 33,513,211 (+)	NCBI		Celera
Cytogenetic Map	6	p21.33	NCBI
HuRef	6	31,651,618 - 31,700,418 (+)	NCBI		HuRef
CHM1_1	6	31,867,703 - 31,915,530 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	6	31,751,025 - 31,798,877 (+)	NCBI		T2T-CHM13v2.0

C2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	17	35,081,578 - 35,101,076 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	17	35,081,580 - 35,117,241 (-)	Ensembl		GRCm39 Ensembl
GRCm38	17	34,862,602 - 34,882,100 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	17	34,862,604 - 34,898,265 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	17	34,999,547 - 35,019,045 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	17	34,470,663 - 34,490,103 (-)	NCBI		MGSCv36	mm8
Celera	17	37,957,910 - 37,977,407 (-)	NCBI		Celera
Cytogenetic Map	17	B1	NCBI
cM Map	17	18.41	NCBI

C2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	20	3,944,722 - 3,975,006 (+)	NCBI		GRCr8
mRatBN7.2	20	3,951,474 - 3,970,376 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	20	3,951,474 - 3,976,505 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	20	4,651,385 - 4,670,381 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	20	4,013,128 - 4,032,129 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	20	4,550,327 - 4,569,295 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	20	4,542,340 - 4,561,152 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	20	4,542,340 - 4,561,152 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	20	6,622,139 - 6,641,139 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	20	4,051,146 - 4,071,909 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	20	4,051,372 - 4,072,135 (+)	NCBI
Celera	20	4,060,318 - 4,078,802 (-)	NCBI		Celera
Cytogenetic Map	20	p12	NCBI

C2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955437	448,672 - 460,519 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955437	449,171 - 460,898 (+)	NCBI	ChiLan1.0	ChiLan1.0

C2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	46,376,853 - 46,422,221 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	42,367,483 - 42,383,704 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	31,590,135 - 31,606,368 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	32,476,791 - 32,492,982 (+)	NCBI	panpan1.1	PanPan1.1	panPan2

C2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	12	1,363,656 - 1,399,732 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	12	1,363,803 - 1,399,728 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	12	1,493,696 - 1,534,930 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	12	1,500,603 - 1,542,031 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	12	1,500,627 - 1,542,028 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	12	1,358,291 - 1,399,309 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	12	1,426,238 - 1,467,677 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	12	1,491,715 - 1,533,005 (+)	NCBI		UU_Cfam_GSD_1.0

C2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	35,913,518 - 35,958,946 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936727	1,602,398 - 1,616,060 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936727	1,602,400 - 1,615,974 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

C2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	17	40,069,852 - 40,094,478 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	17	40,069,909 - 40,094,207 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666044	31,844,362 - 31,862,408 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

C2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624754	24,317,058 - 24,322,656 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624754	24,316,778 - 24,327,065 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in C2
310 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	hemolymphoid system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system
High
Medium	8	2		4					3
Low	2	1	1	1	2	17	1	3
Below cutoff		1	2			6	1

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001101815	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000053	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK233083	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK233128	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK346370	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK394195	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AL773527	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY349422	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CT956038	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBZA01000082	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01117856	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSSCT00000001563 ⟹ ENSSSCP00000001521

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	7	24,020,290 - 24,033,927 (+)	Ensembl

RefSeq Acc Id:

ENSSSCT00000001564 ⟹ ENSSSCP00000001522

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	7	24,020,626 - 24,033,930 (+)	Ensembl

RefSeq Acc Id:

ENSSSCT00000071648 ⟹ ENSSSCP00000067185

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	7	23,995,982 - 24,033,805 (+)	Ensembl

RefSeq Acc Id:

ENSSSCT00000090014 ⟹ ENSSSCP00000069191

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	7	24,020,626 - 24,033,805 (+)	Ensembl

RefSeq Acc Id:

NM_001101815 ⟹ NP_001095285

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	7	24,020,590 - 24,034,042 (+)	NCBI

Sequence:

show sequence

GGCTCCCTGCCGCTCCCTGTCCCTAAGGTAGACACCATGGACCCACTGATGGTCGTCCTTTGCC
TGCTGCCCCTGTACCCAGGCTTAGCGACAGCCGCTCCCTCCTGCCCTCAGAACGTGAATATCGC
AGGGGGCAGTTTCACCCTCAGTAATGGCTGGGCACCTGGGAGTATCCTCACCTACTCCTGCCCC
CTGGGCTATTACCCATTCCCGGTGGCATCAAGACTGTGCAACAGCAACGGACAGTGGCAGATCC
CGAGAGCCACCCGGTCAACAAAGCCAGTCTGCAAACCTGTTCGCTGTCCAGCCCCTGTTTCCTT
TGAGAACGGCGTGTACACCCCGCGGCTGGGGTCCCATCCTGTGGGCGGCAACCTGACCTTTGAG
TGTGAGGACGGCTTCACGCTGCGGGGCTCGCCCGTGCGGCAGTGTCGCCCCAATGGCATGTGGG
ATGGGGAGACGGCTGTGTGTGATAACGGCGCCAGCCACTGCCCAGACCCTGGCATTTCTGTGGG
TGCAGTGCGGACAGGGTCTCGCTTCGGCCCTGGGGACAAGGTCAGGTACCGCTGCTCCTCGAAT
CTGGTGCTGACGGGGTCTATGGAGCGAGAGTGCCAGGACAACGGGGTCTGGAGTGGGACGGAAC
CCATCTGCCGCCAGCCCTACTCTTACGACTTTCCTGAGGATGTGACCCCCGCCCTGGGTACCTC
CTTCTCCCACCTCCTTGGAGCCACAAATCCCACCCAGACTAAGAAGACGGAGAACGTGGGCCGA
AAAATACAAATCCAGCGCTCCGGGCACCTGAACCTCTACCTGCTTCTGGACGCCTCTCAGAGTG
TGTCGGAAGAGGACTTTGGAGTCTTCAAGAGGAGCGCCTCCCTCCTGGTGGACAGGATCTTCAG
CTTTGAGATCAATATTAGTGTCGCCATCATCACCTTTGCATCGAAGCCCAAAATCATCATGTCT
GTCCTGAAGGACAAATCCCGGGATGTGACTGAAGTGGTCCACAGTCTGGAAAACATCAACTATA
AAGACCATGAAAATGGAACTGGGACCAACATCTATGAGGCCCTAAATAGTGTCTACATCATGAT
GAATAATCAAATGCAAAATCTTGGTATGAACACAATGGCCTGGCAGGAAATCCGCCACGCCATC
ATCCTGCTGACAGATGGAAAGTCCAACATGGGTGGCTCTCCCAAGCCAGCTGTTGACAATATCA
AAGAGATCTTGAACATCAAAGAGAAGAGGAAAGACTATCTGGACATCTACGCCATCGGCGTGGG
CAACGTGGAGGTGGACTGGAGAGAACTGAATGAGCTGGGCTCCAAGAAGGATGGCGAGAGGCAT
GCGTTCATTCTGAAGGACACAGAGGCTCTGAGCCAGGTCTTTGAGCACATGCTGGATGTCTCCC
AGCTCACGGACACCATCTGCGGGGTAGGGAACATGTCTGCCAATGCCTCTGCCCAGGAGAGGAC
ACCCTGGCATGTCACTATTAAGCCCAAGAGCCACGAGACCTGCCGGGGGGCCCTCATCTCTGAC
CAGTGGGTCCTGACAGCCGCCCACTGCTTCAGCCACAGCGAGGACCACTCCCTGTGGAGGGTCA
GTGTGGGGGATCCCAACTCCCAATGGGGCAAAGAGTTTCGAATTGAGAAGGCGGTGATCTCCTC
AGAGTTCAATGTCTCTGCCAAGAAGCATCAGGGAATCCCGGAGTTCTATGGTGACGACATTGCC
CTGCTGAAGCTGGACCAGAAAGTGAAAATGTCCACCCACGCCAGGCCCATCTGCCTTCCCTGCA
CGGTGGGGGCCAACCTGGCTCTGCGGAGACATCCAGGCAGCACCTGCCGAGACCACGAGAAGGA
GCTTCTGAACCAACTGAGCGTTCCTGCTCATTTTGTGGCCTTGAATGGGAGCAAGCTGAATGTT
CATCTCAAGACAGGGTCGGATTGGACAAGCTGTATCCAGGCTGTCTCCCAAGACAAAGTCACGT
TCCCCAACTTGACCGATGTCAGAGAGGTGGTGACAGACCAGTTCCTCTGCAGCGGGACCAAGGA
GGATGACAATCCCTGCAAGGGAGAATCTGGGGGATCCGTTTTCCTTGAGCGGAGATTCAGGTTT
TTTCAGGTGGGCCTGGTGAGCTGGGGTCTCTACAGCCCATGCAGCAGCTCCAATAAAAACTTGC
GCAAAAAGGCACCCAGAGGCAGGATCCCACCGCCACGAGATTTCCACATCAATCTCTTCCGCCT
GCAGCCCTGGCTGAGGCAGCACTTGGAGGGCATCCTGAACTTTTTACCCCTCTAATTCTCGGCT
CTCGAGCCTTTTGCTGTCCCGCCAGGATGTGCCATCTCTCTCCCGTCTCCTGCCTCCGGAGGTC
CACCCTCAGCCTCCATGACCCAGCCTCACTCCTTGCTCTGAGTAGAGTAGAGCCCTGCCTCCAG
TATCCCCACCCCCTGGGGCTGGGGAACCTCCAGCGCGCCCAGCAGCACTGGCCCCACCCTCCGG
TTTACTTGGCTCGCTCTCCTCCCACTTTCACGTGGAATTTCCCAGTTATGAAATTAATAAAAAT
CAATGATTTCCACA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001095285	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAR20890	(Get FASTA)	NCBI Sequence Viewer
	CAN87699	(Get FASTA)	NCBI Sequence Viewer
	CAN87700	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000001521
	ENSSSCP00000001521.3
	ENSSSCP00000001522.4
	ENSSSCP00000067185.1
	ENSSSCP00000069191.1
	ENSSSCP00005042994.1
	ENSSSCP00025042862.1
	ENSSSCP00030034289.1
	ENSSSCP00045048589.1
	ENSSSCP00055041181.1
	ENSSSCP00070039131.1
	ENSSSCP00070039144.1
	ENSSSCP00070039145.1
GenBank Protein	JAG69686	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_001095285 ⟸ NM_001101815
- Peptide Label:	precursor
- UniProtKB:	A5PF02 (UniProtKB/TrEMBL), A0A0B8RW16 (UniProtKB/TrEMBL), Q69DL2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDPLMVVLCLLPLYPGLATAAPSCPQNVNIAGGSFTLSNGWAPGSILTYSCPLGYYPFPVASRL CNSNGQWQIPRATRSTKPVCKPVRCPAPVSFENGVYTPRLGSHPVGGNLTFECEDGFTLRGSPV RQCRPNGMWDGETAVCDNGASHCPDPGISVGAVRTGSRFGPGDKVRYRCSSNLVLTGSMERECQ DNGVWSGTEPICRQPYSYDFPEDVTPALGTSFSHLLGATNPTQTKKTENVGRKIQIQRSGHLNL YLLLDASQSVSEEDFGVFKRSASLLVDRIFSFEINISVAIITFASKPKIIMSVLKDKSRDVTEV VHSLENINYKDHENGTGTNIYEALNSVYIMMNNQMQNLGMNTMAWQEIRHAIILLTDGKSNMGG SPKPAVDNIKEILNIKEKRKDYLDIYAIGVGNVEVDWRELNELGSKKDGERHAFILKDTEALSQ VFEHMLDVSQLTDTICGVGNMSANASAQERTPWHVTIKPKSHETCRGALISDQWVLTAAHCFSH SEDHSLWRVSVGDPNSQWGKEFRIEKAVISSEFNVSAKKHQGIPEFYGDDIALLKLDQKVKMST HARPICLPCTVGANLALRRHPGSTCRDHEKELLNQLSVPAHFVALNGSKLNVHLKTGSDWTSCI QAVSQDKVTFPNLTDVREVVTDQFLCSGTKEDDNPCKGESGGSVFLERRFRFFQVGLVSWGLYS PCSSSNKNLRKKAPRGRIPPPRDFHINLFRLQPWLRQHLEGILNFLPL hide sequence

RefSeq Acc Id:

ENSSSCP00000001521 ⟸ ENSSSCT00000001563

RefSeq Acc Id:

ENSSSCP00000069191 ⟸ ENSSSCT00000090014

RefSeq Acc Id:

ENSSSCP00000067185 ⟸ ENSSSCT00000071648

RefSeq Acc Id:

ENSSSCP00000001522 ⟸ ENSSSCT00000001564

Protein Domains

Peptidase S1 Sushi VWFA

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000001422	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00005042642	UniProtKB/TrEMBL
	ENSSSCG00025070078	UniProtKB/TrEMBL
	ENSSSCG00030053761	UniProtKB/TrEMBL
	ENSSSCG00045039233	UniProtKB/TrEMBL
	ENSSSCG00055025295	UniProtKB/TrEMBL
	ENSSSCG00070023255	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000001563	ENTREZGENE
	ENSSSCT00000001563.6	UniProtKB/TrEMBL
	ENSSSCT00000001564.6	UniProtKB/TrEMBL
	ENSSSCT00000071648.2	UniProtKB/TrEMBL
	ENSSSCT00000090014.2	UniProtKB/TrEMBL
	ENSSSCT00005069123.1	UniProtKB/TrEMBL
	ENSSSCT00025097601.1	UniProtKB/TrEMBL
	ENSSSCT00030075004.1	UniProtKB/TrEMBL
	ENSSSCT00045068300.1	UniProtKB/TrEMBL
	ENSSSCT00055051527.1	UniProtKB/TrEMBL
	ENSSSCT00070046383.1	UniProtKB/TrEMBL
	ENSSSCT00070046398.1	UniProtKB/TrEMBL
	ENSSSCT00070046399.1	UniProtKB/TrEMBL
Gene3D-CATH	2.40.10.10	UniProtKB/TrEMBL
	3.40.50.410	UniProtKB/TrEMBL
	Complement Module, domain 1	UniProtKB/TrEMBL
InterPro	Compl_C2_B	UniProtKB/TrEMBL
	Peptidase_S1_PA	UniProtKB/TrEMBL
	Peptidase_S1_PA_chymotrypsin	UniProtKB/TrEMBL
	Peptidase_S1A	UniProtKB/TrEMBL
	Sushi/SCR/CCP_sf	UniProtKB/TrEMBL
	Sushi_SCR_CCP_dom	UniProtKB/TrEMBL
	Trypsin_dom	UniProtKB/TrEMBL
	TRYPSIN_HIS	UniProtKB/TrEMBL
	TRYPSIN_SER	UniProtKB/TrEMBL
	VWF_A	UniProtKB/TrEMBL
	vWFA_dom_sf	UniProtKB/TrEMBL
KEGG Report	ssc:448981	UniProtKB/TrEMBL
NCBI Gene	C2	ENTREZGENE
PANTHER	PTHR46393	UniProtKB/TrEMBL
	PTHR46393:SF2	UniProtKB/TrEMBL
Pfam	Sushi	UniProtKB/TrEMBL
	Trypsin	UniProtKB/TrEMBL
	VWA	UniProtKB/TrEMBL
PIRSF	Compl_C2_B	UniProtKB/TrEMBL
PRINTS	CHYMOTRYPSIN	UniProtKB/TrEMBL
PROSITE	SUSHI	UniProtKB/TrEMBL
	TRYPSIN_DOM	UniProtKB/TrEMBL
	TRYPSIN_HIS	UniProtKB/TrEMBL
	TRYPSIN_SER	UniProtKB/TrEMBL
	VWFA	UniProtKB/TrEMBL
SMART	CCP	UniProtKB/TrEMBL
	Tryp_SPc	UniProtKB/TrEMBL
	VWA	UniProtKB/TrEMBL
Superfamily-SCOP	SSF50494	UniProtKB/TrEMBL
	SSF53300	UniProtKB/TrEMBL
	SSF57535	UniProtKB/TrEMBL
UniProt	A0A0B8RW16	ENTREZGENE
	A0A4X1VC41_PIG	UniProtKB/TrEMBL
	A0A4X1VEI5_PIG	UniProtKB/TrEMBL
	A0A5G2QWF5_PIG	UniProtKB/TrEMBL
	A0A5G2R9A6_PIG	UniProtKB/TrEMBL
	A0A8D0TAM4_PIG	UniProtKB/TrEMBL
	A0A8D0XG71_PIG	UniProtKB/TrEMBL
	A5PF02	ENTREZGENE, UniProtKB/TrEMBL
	A5PF03_PIG	UniProtKB/TrEMBL
	F1RQW7_PIG	UniProtKB/TrEMBL
	Q69DL2	ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary	F1RQW6	UniProtKB/TrEMBL
VGNC ID	VGNC:85989	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM