IFN-ALPHA-10 (interferon-alpha-10) - Rat Genome Database

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Gene: IFN-ALPHA-10 (interferon-alpha-10) Sus scrofa
Analyze
Symbol: IFN-ALPHA-10
Name: interferon-alpha-10
RGD ID: 14188766
Description: ENCODES a protein that exhibits cytokine activity (inferred); cytokine receptor binding (inferred); INVOLVED IN defense response (inferred); defense response to virus (inferred); signal transduction (inferred); FOUND IN extracellular region (inferred); extracellular space (inferred)
Type: protein-coding
RefSeq Status: PROVISIONAL
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11201,353,877 - 201,354,422 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21224,549,629 - 224,550,174 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:20406849   PMID:22301074   PMID:30032202  


Genomics

Variants

.
Variants in IFN-ALPHA-10
5 total Variants

Expression


Sequence


Reference Sequences
RefSeq Acc Id: NM_001166310   ⟹   NP_001159782
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11201,353,877 - 201,354,422 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001159782 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein ABB51634 (Get FASTA)   NCBI Sequence Viewer  
  ABI26102 (Get FASTA)   NCBI Sequence Viewer  
  ACV42399 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSSCP00025023625.1
  ENSSSCP00055012174.1
  ENSSSCP00070052075.1
Reference Protein Sequences
RefSeq Acc Id: NP_001159782   ⟸   NM_001166310
- Peptide Label: precursor
- UniProtKB: Q304V8 (UniProtKB/TrEMBL),   A0A4X1WC37 (UniProtKB/TrEMBL),   C8CKA1 (UniProtKB/TrEMBL)
- Sequence:


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00025041047 UniProtKB/TrEMBL
  ENSSSCG00055007937 UniProtKB/TrEMBL
  ENSSSCG00070030356 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00025055727.1 UniProtKB/TrEMBL
  ENSSSCT00055015489.1 UniProtKB/TrEMBL
  ENSSSCT00070061093.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.1250.10 UniProtKB/TrEMBL
InterPro 4_helix_cytokine-like_core UniProtKB/TrEMBL
  Interferon_alpha/beta/delta UniProtKB/TrEMBL
KEGG Report ssc:100156561 UniProtKB/TrEMBL
NCBI Gene IFN-ALPHA-10 ENTREZGENE
PANTHER INTERFERON ALPHA-5 UniProtKB/TrEMBL
  PTHR11691 UniProtKB/TrEMBL
Pfam Interferon UniProtKB/TrEMBL
PRINTS INTERFERONAB UniProtKB/TrEMBL
PROSITE INTERFERON_A_B_D UniProtKB/TrEMBL
SMART IFabd UniProtKB/TrEMBL
Superfamily-SCOP SSF47266 UniProtKB/TrEMBL
UniProt A0A4X1WC37 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0RZU6_PIG UniProtKB/TrEMBL
  C8CKA1 ENTREZGENE, UniProtKB/TrEMBL
  Q304V8 ENTREZGENE, UniProtKB/TrEMBL