ARSK (arylsulfatase family member K) - Rat Genome Database

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Gene: ARSK (arylsulfatase family member K) Sus scrofa
Analyze
Symbol: ARSK
Name: arylsulfatase family member K
RGD ID: 14145028
Description: ENCODES a protein that exhibits arylsulfatase activity (inferred); glucuronate-2-sulfatase activity (inferred); hydrolase activity (inferred); ASSOCIATED WITH autism spectrum disorder (ortholog); familial adenomatous polyposis 1 (ortholog); Hereditary Neoplastic Syndromes (ortholog); FOUND IN extracellular region (inferred); lysosome (inferred); INTERACTS WITH deoxynivalenol; ethanol
Type: protein-coding
RefSeq Status: MODEL
Previously known as: arylsulfatase K
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl2102,164,222 - 102,212,780 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.12102,164,089 - 102,210,293 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2295,606,130 - 95,652,293 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
deoxynivalenol  (EXP)
ethanol  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:15679890  


Genomics

Comparative Map Data
ARSK
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl2102,164,222 - 102,212,780 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.12102,164,089 - 102,210,293 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2295,606,130 - 95,652,293 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ARSK
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38595,555,101 - 95,605,102 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl595,555,101 - 95,605,102 (+)EnsemblGRCh38hg38GRCh38
GRCh37594,890,805 - 94,940,806 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36594,916,581 - 94,966,562 (+)NCBINCBI36Build 36hg18NCBI36
Celera590,769,262 - 90,819,241 (+)NCBICelera
Cytogenetic Map5q15NCBI
HuRef590,081,026 - 90,130,924 (+)NCBIHuRef
CHM1_1594,323,502 - 94,373,480 (+)NCBICHM1_1
T2T-CHM13v2.0596,056,040 - 96,106,030 (+)NCBIT2T-CHM13v2.0
Arsk
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391376,208,829 - 76,246,744 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1376,208,541 - 76,246,779 (-)EnsemblGRCm39 Ensembl
GRCm381376,060,422 - 76,098,660 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1376,060,422 - 76,098,660 (-)EnsemblGRCm38mm10GRCm38
MGSCv371376,197,870 - 76,236,108 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361376,526,884 - 76,564,613 (-)NCBIMGSCv36mm8
Celera1378,379,696 - 78,412,789 (-)NCBICelera
Cytogenetic Map13C1NCBI
cM Map1340.95NCBI
Arsk
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr827,306,181 - 7,363,311 (-)NCBIGRCr8
mRatBN7.225,574,319 - 5,631,451 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl25,574,322 - 5,631,467 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx212,682,660 - 12,736,395 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0210,781,895 - 10,835,628 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.025,418,263 - 5,473,902 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.022,835,568 - 2,891,059 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl22,834,355 - 2,891,253 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.022,834,700 - 2,891,776 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.423,125,172 - 3,181,562 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.123,143,731 - 3,203,059 (-)NCBI
Celera22,045,215 - 2,100,520 (-)NCBICelera
Cytogenetic Map2q11NCBI
Arsk
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541816,956,754 - 16,989,593 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541816,959,736 - 16,989,293 (-)NCBIChiLan1.0ChiLan1.0
ARSK
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2419,775,162 - 19,824,084 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1517,915,623 - 17,977,514 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0519,744,154 - 19,794,098 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1519,890,789 - 19,939,273 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl519,890,869 - 19,939,068 (-)Ensemblpanpan1.1panPan2
ARSK
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1313,993,008 - 14,027,527 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl313,992,857 - 14,027,527 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha315,332,099 - 15,366,407 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0313,873,423 - 13,907,704 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl313,871,832 - 13,907,775 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1313,836,197 - 13,870,480 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0313,833,711 - 13,867,956 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0314,033,163 - 14,067,468 (-)NCBIUU_Cfam_GSD_1.0
Arsk
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213169,550,827 - 169,601,097 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365237,736,021 - 7,786,569 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365237,736,515 - 7,786,370 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ARSK
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1489,438,339 - 89,488,019 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl489,438,539 - 89,489,085 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604938,083,306 - 38,135,736 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Arsk
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474314,197,845 - 14,228,839 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474314,198,012 - 14,228,054 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in ARSK
1655 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium 3 8 2
Low 10 4 5 2 15 3 3
Below cutoff

Sequence


RefSeq Acc Id: ENSSSCT00000015443   ⟹   ENSSSCP00000015034
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl2102,164,222 - 102,212,780 (+)Ensembl
RefSeq Acc Id: XM_003354206   ⟹   XP_003354254
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.12102,164,089 - 102,210,293 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013991487   ⟹   XP_013846941
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.12102,164,090 - 102,209,762 (+)NCBI
Sequence:
RefSeq Acc Id: XP_003354254   ⟸   XM_003354206
- Peptide Label: isoform X1
- UniProtKB: A0A8D1XHU3 (UniProtKB/TrEMBL),   A0A480QD42 (UniProtKB/TrEMBL),   A0A480YUS6 (UniProtKB/TrEMBL),   A0A4X1TJN6 (UniProtKB/TrEMBL),   A0A8D1Q7N8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013846941   ⟸   XM_013991487
- Peptide Label: isoform X2
- UniProtKB: A0A480YUS6 (UniProtKB/TrEMBL),   A0A4X1TJN6 (UniProtKB/TrEMBL),   A0A8D1Q7N8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSSCP00000015034   ⟸   ENSSSCT00000015443
Protein Domains
Sulfatase N-terminal


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000014139 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00025009463 UniProtKB/TrEMBL
  ENSSSCG00035016772 UniProtKB/TrEMBL
  ENSSSCG00045001799 UniProtKB/TrEMBL
  ENSSSCG00055008699 UniProtKB/TrEMBL
  ENSSSCG00065011665 UniProtKB/TrEMBL
  ENSSSCG00070009410 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000015443 ENTREZGENE
  ENSSSCT00000015443.5 UniProtKB/TrEMBL
  ENSSSCT00025012531.1 UniProtKB/TrEMBL
  ENSSSCT00035021494.1 UniProtKB/TrEMBL
  ENSSSCT00045002819.1 UniProtKB/TrEMBL
  ENSSSCT00055016981.1 UniProtKB/TrEMBL
  ENSSSCT00065015517.1 UniProtKB/TrEMBL
  ENSSSCT00070018270.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.720.10 UniProtKB/TrEMBL
InterPro Alkaline_phosphatase_core_sf UniProtKB/TrEMBL
  ARSK UniProtKB/TrEMBL
  Sulfatase_N UniProtKB/TrEMBL
KEGG Report ssc:100627205 UniProtKB/TrEMBL
NCBI Gene ARSK ENTREZGENE
PANTHER ARYLSULFATASE K UniProtKB/TrEMBL
  ARYLSULFATASE K UniProtKB/TrEMBL
Pfam Sulfatase UniProtKB/TrEMBL
Superfamily-SCOP SSF53649 UniProtKB/TrEMBL
UniProt A0A480QD42 ENTREZGENE, UniProtKB/TrEMBL
  A0A480YUS6 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1TJN6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1Q7N8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1XHU3 ENTREZGENE, UniProtKB/TrEMBL
  F1REY9_PIG UniProtKB/TrEMBL
VGNC ID VGNC:85550 ENTREZGENE