LOC100623255 (UDP-glucuronosyltransferase 2B31) - Rat Genome Database

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Gene: LOC100623255 (UDP-glucuronosyltransferase 2B31) Sus scrofa
Analyze
Symbol: LOC100623255
Name: UDP-glucuronosyltransferase 2B31
RGD ID: 14144452
Description: ENCODES a protein that exhibits retinoic acid binding (ortholog); INVOLVED IN androgen metabolic process (ortholog); PARTICIPATES IN artemether pharmacokinetics pathway; codeine and morphine pharmacodynamics pathway; codeine and morphine pharmacokinetics pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); urinary bladder cancer (ortholog); FOUND IN membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1865,915,718 - 65,936,113 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2870,337,489 - 70,357,808 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
membrane  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:14681463   PMID:17145712   PMID:22301074  


Genomics

Comparative Map Data
LOC100623255
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1865,915,718 - 65,936,113 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2870,337,489 - 70,357,808 (-)NCBISscrofa10.2Sscrofa10.2susScr3
UGT2B7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38469,051,375 - 69,112,987 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl469,051,363 - 69,112,987 (+)EnsemblGRCh38hg38GRCh38
GRCh37469,917,093 - 69,978,705 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36469,996,814 - 70,013,293 (+)NCBINCBI36Build 36hg18NCBI36
Build 34470,142,984 - 70,159,464NCBI
Celera467,303,842 - 67,320,327 (+)NCBICelera
Cytogenetic Map4q13.2NCBI
HuRef465,757,832 - 65,774,338 (+)NCBIHuRef
CHM1_1469,998,516 - 70,014,999 (+)NCBICHM1_1
T2T-CHM13v2.0472,492,136 - 72,553,482 (+)NCBIT2T-CHM13v2.0
Ugt2b34
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39587,037,613 - 87,054,805 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl587,037,626 - 87,054,796 (-)EnsemblGRCm39 Ensembl
GRCm38586,889,770 - 86,906,937 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl586,889,767 - 86,906,937 (-)EnsemblGRCm38mm10GRCm38
MGSCv37587,318,795 - 87,335,962 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36587,964,331 - 87,981,498 (-)NCBIMGSCv36mm8
Celera584,109,778 - 84,126,936 (-)NCBICelera
Cytogenetic Map5E1NCBI
cM Map543.56NCBI
Ugt2b7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81421,251,535 - 21,274,451 (+)NCBIGRCr8
mRatBN7.21420,896,682 - 20,919,604 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1420,896,682 - 20,919,604 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1421,234,855 - 21,257,777 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01422,553,786 - 22,576,709 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01421,084,881 - 21,107,803 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01422,597,103 - 22,619,968 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01422,498,982 - 22,521,751 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41422,499,152 - 22,522,842 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11422,499,151 - 22,522,842 (+)NCBI
Celera1420,401,346 - 20,422,368 (+)NCBICelera
Cytogenetic Map14p21NCBI

Variants

.
Variants in LOC100623255
453 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

nervous system
High
Medium
Low
Below cutoff 4

Sequence


Reference Sequences
RefSeq Acc Id: XM_003356952   ⟹   XP_003357000
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1865,915,718 - 65,936,113 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003357000 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSSCP00000078523
  ENSSSCP00000078523.1
  ENSSSCP00005003720.1
Reference Protein Sequences
RefSeq Acc Id: XP_003357000   ⟸   XM_003356952
- UniProtKB: A0A8D0I5K9 (UniProtKB/TrEMBL)
- Sequence:


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000008935 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00005004268 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000105852 ENTREZGENE
  ENSSSCT00000105852.1 UniProtKB/TrEMBL
  ENSSSCT00005006410.1 UniProtKB/TrEMBL
Gene3D-CATH Glycogen Phosphorylase B UniProtKB/TrEMBL
InterPro UDP_glucos_trans UniProtKB/TrEMBL
  UDP_glycos_trans_CS UniProtKB/TrEMBL
NCBI Gene LOC100623255 ENTREZGENE
PANTHER EG:EG0003.4 PROTEIN-RELATED UniProtKB/TrEMBL
  UDP-GLUCURONOSYLTRANSFERASE 2B17-RELATED UniProtKB/TrEMBL
Pfam UDPGT UniProtKB/TrEMBL
PROSITE UDPGT UniProtKB/TrEMBL
Superfamily-SCOP UDP-Glycosyltransferase/glycogen phosphorylase UniProtKB/TrEMBL
UniProt A0A8D0I5K9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8W4FI10_PIG UniProtKB/TrEMBL