ZNF750 (zinc finger protein 750) - Rat Genome Database

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Gene: ZNF750 (zinc finger protein 750) Sus scrofa
Analyze
Symbol: ZNF750
Name: zinc finger protein 750
RGD ID: 14136104
Description: ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN establishment of skin barrier (ortholog); membrane biogenesis (ortholog); negative regulation of epithelial to mesenchymal transition (ortholog); ASSOCIATED WITH early onset progressive encephalopathy with brain atrophy and thin corpus callosum (ortholog); Seborrhea-Like Dermatitis with Psoriasiform Elements (ortholog); FOUND IN nucleus (inferred); INTERACTS WITH zearalenone
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.112398,498 - 407,812 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.212329,870 - 339,270 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
ZNF750
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.112398,498 - 407,812 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.212329,870 - 339,270 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ZNF750
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381782,829,434 - 82,840,022 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1782,829,434 - 82,840,022 (-)EnsemblGRCh38hg38GRCh38
GRCh371780,787,310 - 80,797,898 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361778,380,599 - 78,391,220 (-)NCBINCBI36Build 36hg18NCBI36
Celera1777,382,410 - 77,393,031 (-)NCBICelera
Cytogenetic Map17q25.3NCBI
HuRef1776,188,827 - 76,199,624 (-)NCBIHuRef
CHM1_11780,873,594 - 80,884,216 (-)NCBICHM1_1
T2T-CHM13v2.01783,704,197 - 83,714,778 (-)NCBIT2T-CHM13v2.0
Zfp750
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3911121,401,802 - 121,410,168 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl11121,401,804 - 121,410,159 (-)EnsemblGRCm39 Ensembl
GRCm3811121,510,976 - 121,519,342 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl11121,510,978 - 121,519,333 (-)EnsemblGRCm38mm10GRCm38
MGSCv3711121,372,290 - 121,380,656 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3611121,327,068 - 121,335,392 (-)NCBIMGSCv36mm8
Celera11133,246,969 - 133,255,334 (-)NCBICelera
Cytogenetic Map11E2NCBI
cM Map1185.49NCBI
Znf750
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr810107,270,926 - 107,279,904 (-)NCBIGRCr8
mRatBN7.210106,772,162 - 106,781,186 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl10106,772,669 - 106,781,200 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.010110,698,581 - 110,701,222 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl10110,698,891 - 110,701,137 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.010110,283,100 - 110,286,758 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera10105,308,542 - 105,311,184 (-)NCBICelera
Cytogenetic Map10q32.3NCBI
Znf750
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955506352,552 - 363,003 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955506352,616 - 360,802 (+)NCBIChiLan1.0ChiLan1.0
ZNF750
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21999,372,233 - 99,389,529 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan117104,275,815 - 104,282,018 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01777,246,953 - 77,260,598 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11783,043,886 - 83,054,446 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1783,043,886 - 83,054,446 (-)Ensemblpanpan1.1panPan2
ZNF750
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Dog10K_Boxer_Tasha9276,880 - 289,093 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.09268,566 - 280,803 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl9277,747 - 280,045 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.19262,771 - 274,975 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.09424,031 - 436,203 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.09499,233 - 511,457 (+)NCBIUU_Cfam_GSD_1.0
Znf750
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602262,603 - 270,355 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936923299,719 - 307,488 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936923299,725 - 302,741 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZNF750
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11674,720,080 - 74,731,951 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1674,720,763 - 74,723,075 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607746,375,040 - 46,386,964 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Znf750
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462480111,520,636 - 11,522,890 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462480111,519,383 - 11,528,264 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in ZNF750
212 total Variants

Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_005656881   ⟹   XP_005656938
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.112398,498 - 407,812 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005656938 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSSCP00045008313.1
Reference Protein Sequences
RefSeq Acc Id: XP_005656938   ⟸   XM_005656881
- UniProtKB: A0A8D1H0T8 (UniProtKB/TrEMBL)
- Sequence:
Protein Domains
Zinc finger protein 750-like zinc finger


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00045007343 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00045012181.1 UniProtKB/TrEMBL
InterPro ZNF750 UniProtKB/TrEMBL
  ZNF750_Znf UniProtKB/TrEMBL
NCBI Gene ZNF750 ENTREZGENE
PANTHER UNCHARACTERIZED UniProtKB/TrEMBL
  ZINC FINGER PROTEIN 750 UniProtKB/TrEMBL
Pfam zf-C2H2_7 UniProtKB/TrEMBL
UniProt A0A8D1H0T8 ENTREZGENE, UniProtKB/TrEMBL